iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018102

Ensembl Protein ID

Bra040048.1-P

UniProt Accession

M4FG23; M4FG23_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040048	Bra040048.1	Bra040048.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-06	28.1	157	215

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdg.plvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C++Cl++         +    l++ C H f+ +C+ +w     +  +++ s+   CP+Cr
   Q: 157  CSVCLDRVlskatpgeR-KfGLLTECHHPFCIQCIRNWrssapVSGMDVNSTLRACPICR 215
           99****99887766642.1355699**********************************8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSDRILCKFF IHGSCLKGEH CEYSHDSNVC TFYQKGICLY GSRCRNEHVR TTSQPQSLSP 60
SNVPPPPQKG DDNNNNNNNN NDVCYIHPRE YPICSFAAAG DCPRGSQCPH MHGDICSTCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGACA GGTAAATCTA AACTTCTTCA TCTCTCAAGG GCTCTGTTCA TCAACCTATG 60
TTAAGTCTTT CAATCCCCTG TTGAGAAAAA AGATTGACTC TTTTGATTGA TAACTTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003024	Amborella trichopoda	57.35	4.00e-112	397.00
IUUC-Aly-006124	Arabidopsis lyrata	78.82	3.00e-138	484.00
IUUC-Ath-006918	Arabidopsis thaliana	79.19	5.00e-136	476.00
IUUC-Bdi-015008	Brachypodium distachyon	50.00	3.00e-82	298.00
IUUC-Bol-016162	Brassica oleracea	94.19	3.00e-152	530.00
IUUC-Cre-022707	Chlamydomonas reinhardtii	38.73	1.00e-56	213.00
IUUC-Csv-026322	Ciona savignyi	43.52	2.00e-43	169.00
IUUC-Dre-027762	Danio rerio	31.47	2.00e-52	199.00
IUUC-Ola-086506	Oryzias latipes	33.94	1.00e-55	210.00
IUUC-Olu-087870	Ostreococcus lucimarinus	41.72	2.00e-33	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence