iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120961

Ensembl Protein ID

EOX99590

UniProt Accession

A0A061E5G8; A0A061E5G8_THECC

Genbank Protein ID

EOX99590.1; EOX99591.1; EOX99592.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001880; CM001880; CM001880

Gene Name

TCM_008310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_008310	EOX99590	EOX99590

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.0	181	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+++  +++ ++++C H+fh+ C++ w        ++ +CP+C
   Q: 181  CPTCLDEYtpENPKITTRCSHHFHLGCIYEW------LERSESCPIC 221
           ******998777555688*************......9********* PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGAFCCCPCG DEHEEYAYPS NSIYRHCICL RFFFYQLFTG YGAMFHRLEG RPVSSQIQGA 60
SLSSTAIATA VPDNSINETH VTMSRPVPYD TEQRYSRLQR DGLVSRRDKS VTHFQEETQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGATCTTCT CTTTTTCCTG CTGCCTAACG TTAGCCTCCC TTTTATTTTT ATTTTTGTCA 60
TTATCATGAA TCAGGTTTCT TTTTCTCAGA AAATTTGAAC TTCCGGATTC AGTCAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003101	Amborella trichopoda	59.11	2.00e-70	258.00
IUUC-Bdi-014305	Brachypodium distachyon	56.47	5.00e-72	262.00
IUUC-Cre-022854	Chlamydomonas reinhardtii	61.54	3.00e-17	78.60
IUUC-Hvu-047238	Hordeum vulgare	56.71	1.00e-74	271.00
IUUC-Lpe-050881	Leersia perrieri	56.02	1.00e-58	218.00
IUUC-Mac-065567	Musa acuminata	64.22	5.00e-83	299.00
IUUC-Oba-075350	Oryza barthii	49.33	8.00e-59	218.00
IUUC-Obr-076662	Oryza brachyantha	55.84	4.00e-71	259.00
IUUC-Ogl-076952	Oryza glaberrima	56.28	7.00e-75	272.00
IUUC-Ogu-078019	Oryza glumaepatula	49.33	7.00e-59	219.00
IUUC-Oin-079155	Oryza indica	56.28	7.00e-75	272.00
IUUC-Olo-080258	Oryza longistaminata	55.50	8.00e-59	219.00
IUUC-Ome-081642	Oryza meridionalis	55.16	2.00e-70	257.00
IUUC-Oni-082523	Oryza nivara	49.33	1.00e-58	218.00
IUUC-Opu-083941	Oryza punctata	55.50	8.00e-58	215.00
IUUC-Oru-084804	Oryza rufipogon	55.50	8.00e-59	218.00
IUUC-Osa-085985	Oryza sativa	56.28	7.00e-75	272.00
IUUC-Pop-099363	Populus trichocarpa	75.76	4.00e-106	376.00
IUUC-Ppe-101954	Prunus persica	72.29	7.00e-101	358.00
IUUC-Pgr-103691	Puccinia graminis	53.49	8.00e-09	53.90
IUUC-Smo-109167	Selaginella moellendorffii	67.92	1.00e-19	86.70
IUUC-Sit-109989	Setaria italica	58.01	5.00e-77	279.00
IUUC-Sbi-113909	Sorghum bicolor	55.41	1.00e-68	251.00
IUUC-Tae-124969	Triticum aestivum	55.41	1.00e-72	265.00
IUUC-Tur-126641	Triticum urartu	55.50	4.00e-57	213.00
IUUC-Vvi-131562	Vitis vinifera	75.43	8.00e-105	372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence