iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099333

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific protease 8 family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_171961; POPTR_0001s22200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s22200	POPTR_0001s22200.1	POPTR_0001s22200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.10e-110	368.9	50	644

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           tGl+NlgNtC+mNS++QcL+++p+l +++l  + +++n++np +++ge++ ++ +l++ lw    + v+pr+++++l+++a++fsg++q+D
   Q: 50   TGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGREVNHKNPLGMNGEIALAFGDLLRRLWAPGATPVAPRTFKSKLARFAPQFSGFNQHD 140
           7****************************************************************************************** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedk...selsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           +qE+laflld+l+e+l++ k+kp+ e+++e++   +e  de ++++  +n+s+i+d+ qgq+ks+++c++c++vs++++pf++lslp+p+ 
   Q: 141  SQELLAFLLDGLHEDLNRVKSKPYVEAKDEESrpdEEVADEYWQNHVARNDSVIVDVCQGQYKSTLVCPDCRKVSVTFDPFMYLSLPLPST 231
           ************************999988851113455559***********************************************99 PP
   S: 180  eetkke..................................................................................... 185
           +++ ++                                                                                     
   Q: 232  NTRTMTltvvsadgsiqpssytisvpkfgkcedlihalsiacslgidetllvaevynnriirfleepadylslirdndrlvayrlkkdfdn 322
           9887779************************************************************************************ PP
   S: 186  ........................................................................................... 185
                                                                                                      
   Q: 323  splvvfmhqhmeehyfhgkltsswkafgiplvgnvhnfvsgsdihnlylqlvapfrippdgtldndldsttieevegmvdntssspdgdak 413
           ******************************************************************************************* PP
   S: 186  .....................................................................................slqdcL 191
                                                                                                sl +cL
   Q: 414  pcsakgvelpsdselqfyltdekgmvkdenivmnepvpkiglhrrfnvlvcwpekltkqydtsllsslpeifksgffakrpqesvSLYNCL 504
           ******************************************************************************************* PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLi 281
           e+f kee l  e+++yc++ck++++a+kkl+l++lPe+L++hLkRfs+++  + ++k++++v+fp   Ldls +++ ++ +   +++Y L+
   Q: 505  EAFLKEEPLGPEDMWYCPSCKQHRQASKKLDLWRLPEILVIHLKRFSYTH--SAKNKLETYVDFPVDdLDLSTHLSYKNGQL--SHRYMLY 591
           **********************************************9988..5889*********999*******9988877..9****** PP
   S: 282  avvvHsGslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           a+ +H+Gs+++GHY+a++    ++W+ fdDs+V+++++e++++   s aYvlfY+r
   Q: 592  AISNHYGSMGGGHYTAFIHYGGDQWYDFDDSHVSPISQEKIKT---SAAYVLFYRR 644
           *******************************************...********98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAVQNYNGIH SSGTSTAMNG NAGNTSTSIF RSNSSAFFGR SGEAGSLGLT GLQNLGNTCF 60
MNSAIQCLAH TPKLVDYFLG DYGREVNHKN PLGMNGEIAL AFGDLLRRLW APGATPVAPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTCCTGG AGTTGCAAAT TTATGGATTA TCTGATAGCA TTAAGTGCAG AGAAGGGAAG 60
AAAGCTGATA TGGCTGTACA AAATTATAAC GGAATACATT CTTCTGGAAC TTCAACTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s22200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000425	Aegilops tauschii	60.47	0.00e+00	667.00
IUUC-Atr-002955	Amborella trichopoda	63.59	0.00e+00	772.00
IUUC-Aly-005456	Arabidopsis lyrata	69.09	0.00e+00	837.00
IUUC-Ath-007677	Arabidopsis thaliana	69.04	0.00e+00	816.00
IUUC-Bdi-014404	Brachypodium distachyon	58.69	0.00e+00	733.00
IUUC-Bol-015699	Brassica oleracea	66.77	0.00e+00	840.00
IUUC-Bra-017554	Brassica rapa	68.41	0.00e+00	840.00
IUUC-Cre-022582	Chlamydomonas reinhardtii	62.50	3.00e-68	251.00
IUUC-Ete-032970	Echinops telfairi	60.75	2.00e-73	270.00
IUUC-Fox-037986	Fusarium oxysporum	41.43	1.00e-55	212.00
IUUC-Fso-038291	Fusarium solani	40.00	4.00e-60	226.00
IUUC-Gma-043629	Glycine max	69.92	0.00e+00	871.00
IUUC-Hvu-047108	Hordeum vulgare	56.88	0.00e+00	716.00
IUUC-Lpe-051047	Leersia perrieri	63.43	0.00e+00	788.00
IUUC-Mtr-058489	Medicago truncatula	70.62	0.00e+00	872.00
IUUC-Mac-065227	Musa acuminata	53.33	0.00e+00	700.00
IUUC-Oba-075553	Oryza barthii	54.25	0.00e+00	713.00
IUUC-Obr-076416	Oryza brachyantha	63.53	0.00e+00	773.00
IUUC-Ogl-077583	Oryza glaberrima	54.25	0.00e+00	713.00
IUUC-Ogu-078391	Oryza glumaepatula	56.47	0.00e+00	743.00
IUUC-Oin-079768	Oryza indica	58.83	0.00e+00	760.00
IUUC-Olo-080319	Oryza longistaminata	57.61	0.00e+00	702.00
IUUC-Ome-081819	Oryza meridionalis	61.46	0.00e+00	758.00
IUUC-Oni-082947	Oryza nivara	56.32	0.00e+00	744.00
IUUC-Opu-083770	Oryza punctata	57.28	0.00e+00	726.00
IUUC-Oru-084273	Oryza rufipogon	56.32	0.00e+00	741.00
IUUC-Osa-085641	Oryza sativa	57.12	0.00e+00	716.00
IUUC-Ppe-102062	Prunus persica	71.68	0.00e+00	904.00
IUUC-Spo-108291	Schizosaccharomyces pombe	36.70	6.00e-108	384.00
IUUC-Smo-108736	Selaginella moellendorffii	51.86	1.00e-163	569.00
IUUC-Sit-109930	Setaria italica	60.59	0.00e+00	793.00
IUUC-Sly-111891	Solanum lycopersicum	69.37	0.00e+00	863.00
IUUC-Sbi-114549	Sorghum bicolor	61.92	0.00e+00	742.00
IUUC-Tni-120107	Tetraodon nigroviridis	51.08	6.00e-87	315.00
IUUC-Tca-121598	Theobroma cacao	73.71	0.00e+00	927.00
IUUC-Tae-125811	Triticum aestivum	62.18	0.00e+00	750.00
IUUC-Tur-126149	Triticum urartu	60.47	0.00e+00	665.00
IUUC-Vda-129781	Verticillium dahliae	37.50	7.00e-55	209.00
IUUC-Vvi-131066	Vitis vinifera	72.73	0.00e+00	942.00
IUUC-Yli-134392	Yarrowia lipolytica	43.57	1.00e-60	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence