iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114539

UUCD1 version

UUC-SoB-01330

Ensembl Protein ID

Sb09g030580.1

UniProt Accession

A0A1B6PAL8; A0A1B6PAL8_SORBI

Genbank Protein ID

KXG22678.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G255600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g030580	Sb09g030580.1	Sb09g030580.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	80.51	0.00e+00	1835.00	IUUC-Ath-006658
E3 adaptor/Cullin RING/DCX/DDB1	33.77	2.00e-172	604.00	IUUC-Cel-018239
E3 adaptor/Cullin RING/DCX/DDB1	45.64	0.00e+00	969.00	IUUC-Dme-031940
E3 adaptor/Cullin RING/DCX/DDB1	52.73	0.00e+00	1162.00	IUUC-Hsa-046709

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSVWNYVVTA HKPTSVSHSC VGNFTSPNQL NLIIAKCTRI EIHLLTPQGL QPMLDVPIYG 60
RIATIELFRP HNETQDFLFI ATERYKFCVL QWDAEKSELI TRAMGDVSDR IGRPTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGTCTCCT TCACCGCCAC CACCACCACC TCCTTTTCCC TCACCTTCCA GAGCCCACTG 60
CTCTCCGGCG GCGGCGGCGG CAGCGGCAGC GGAGATGAGC GTGTGGAACT ACGTCGTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	88.33	0.00e+00	2043.00
IUUC-Aml-002096	Ailuropoda melanoleuca	52.55	0.00e+00	1171.00
IUUC-Atr-002742	Amborella trichopoda	80.79	0.00e+00	1825.00
IUUC-Apl-003624	Anas platyrhynchos	51.31	0.00e+00	1127.00
IUUC-Aca-005085	Anolis carolinensis	51.69	0.00e+00	1158.00
IUUC-Aly-005857	Arabidopsis lyrata	80.78	0.00e+00	1862.00
IUUC-Ath-006658	Arabidopsis thaliana	80.51	0.00e+00	1855.00
IUUC-Acl-008149	Aspergillus clavatus	29.61	5.00e-123	434.00
IUUC-Afl-008549	Aspergillus flavus	29.59	2.00e-120	426.00
IUUC-Afu-009076	Aspergillus fumigatus	29.68	1.00e-133	470.00
IUUC-Ani-009302	Aspergillus nidulans	27.68	1.00e-106	380.00
IUUC-Ang-009636	Aspergillus niger	29.20	7.00e-108	384.00
IUUC-Aor-010073	Aspergillus oryzae	29.86	4.00e-128	452.00
IUUC-Ate-010422	Aspergillus terreus	29.83	2.00e-129	456.00
IUUC-Ame-011643	Astyanax mexicanus	44.90	0.00e+00	939.00
IUUC-Bgr-012164	Blumeria graminis	28.17	3.00e-116	412.00
IUUC-Bta-012494	Bos taurus	52.55	0.00e+00	1170.00
IUUC-Bci-013957	Botrytis cinerea	29.14	2.00e-114	406.00
IUUC-Bdi-014186	Brachypodium distachyon	90.44	0.00e+00	2031.00
IUUC-Bol-015922	Brassica oleracea	79.69	0.00e+00	1840.00
IUUC-Bra-017300	Brassica rapa	79.69	0.00e+00	1833.00
IUUC-Cel-018239	Caenorhabditis elegans	33.66	2.00e-173	602.00
IUUC-Cja-019165	Callithrix jacchus	52.46	0.00e+00	1168.00
IUUC-Cfa-020406	Canis familiaris	52.55	0.00e+00	1171.00
IUUC-Cpo-022154	Cavia porcellus	52.46	0.00e+00	1169.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	49.18	0.00e+00	997.00
IUUC-Csa-024061	Chlorocebus sabaeus	52.46	0.00e+00	1168.00
IUUC-Cho-024554	Choloepus hoffmanni	46.00	1.00e-130	460.00
IUUC-Cin-025466	Ciona intestinalis	47.90	0.00e+00	1049.00
IUUC-Csv-026370	Ciona savignyi	46.88	0.00e+00	942.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	28.36	3.00e-116	412.00
IUUC-Cme-027342	Cyanidioschyzon merolae	31.01	9.00e-110	391.00
IUUC-Dre-027448	Danio rerio	49.03	9.00e-154	536.00
IUUC-Dno-029794	Dasypus novemcinctus	52.04	0.00e+00	1118.00
IUUC-Dor-030789	Dipodomys ordii	46.84	7.00e-121	427.00
IUUC-Dse-031491	Dothistroma septosporum	28.96	2.00e-125	442.00
IUUC-Dme-031940	Drosophila melanogaster	45.55	0.00e+00	959.00
IUUC-Ete-032913	Echinops telfairi	55.42	3.00e-81	296.00
IUUC-Eca-033777	Equus caballus	52.29	0.00e+00	1161.00
IUUC-Eeu-034900	Erinaceus europaeus	47.50	2.00e-160	559.00
IUUC-Fca-035869	Felis catus	52.55	0.00e+00	1171.00
IUUC-Fal-036777	Ficedula albicollis	51.60	0.00e+00	1154.00
IUUC-Fox-037954	Fusarium oxysporum	28.35	4.00e-120	425.00
IUUC-Fso-038292	Fusarium solani	28.07	6.00e-120	424.00
IUUC-Gmo-038815	Gadus morhua	44.75	7.00e-146	510.00
IUUC-Ggr-039907	Gaeumannomyces graminis	27.54	4.00e-117	415.00
IUUC-Gga-040995	Gallus gallus	51.73	0.00e+00	1162.00
IUUC-Gac-042390	Gasterosteus aculeatus	51.03	0.00e+00	1094.00
IUUC-Gma-042904	Glycine max	81.61	0.00e+00	1821.00
IUUC-Ggo-044891	Gorilla gorilla	52.33	0.00e+00	1165.00
IUUC-Hsa-046709	Homo sapiens	52.46	0.00e+00	1168.00
IUUC-Hvu-047504	Hordeum vulgare	90.98	0.00e+00	2054.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	52.64	0.00e+00	1171.00
IUUC-Lch-050565	Latimeria chalumnae	52.11	0.00e+00	1165.00
IUUC-Lpe-051260	Leersia perrieri	91.88	0.00e+00	2066.00
IUUC-Loc-052091	Lepisosteus oculatus	46.59	0.00e+00	766.00
IUUC-Lma-053246	Leptosphaeria maculans	28.86	9.00e-121	427.00
IUUC-Laf-053502	Loxodonta africana	52.64	0.00e+00	1171.00
IUUC-Mcc-054802	Macaca mulatta	52.46	0.00e+00	1169.00
IUUC-Meu-056808	Macropus eugenii	55.49	0.00e+00	792.00
IUUC-Mor-057253	Magnaporthe oryzae	28.06	1.00e-107	384.00
IUUC-Mpo-057562	Magnaporthe poae	26.69	4.00e-109	388.00
IUUC-Mtr-057743	Medicago truncatula	81.15	0.00e+00	1847.00
IUUC-Mla-059154	Melampsora laricipopulina	26.09	6.00e-83	301.00
IUUC-Mga-059824	Meleagris gallopavo	51.28	0.00e+00	1079.00
IUUC-Mvi-060279	Microbotryum violaceum	27.13	7.00e-110	391.00
IUUC-Mmr-061215	Microcebus murinus	52.20	0.00e+00	1156.00
IUUC-Mdo-062028	Monodelphis domestica	50.36	0.00e+00	927.00
IUUC-Mmu-064327	Mus musculus	52.46	0.00e+00	1168.00
IUUC-Mac-065445	Musa acuminata	82.60	0.00e+00	1844.00
IUUC-Mpu-065814	Mustela putorius furo	50.62	0.00e+00	1104.00
IUUC-Mlu-067136	Myotis lucifugus	52.38	0.00e+00	1162.00
IUUC-Nfi-068355	Neosartorya fischeri	29.82	2.00e-127	449.00
IUUC-Ncr-068620	Neurospora crassa	28.56	3.00e-119	422.00
IUUC-Nle-069566	Nomascus leucogenys	52.38	0.00e+00	1158.00
IUUC-Opr-070915	Ochotona princeps	50.61	0.00e+00	880.00
IUUC-Ont-071753	Oreochromis niloticus	51.47	0.00e+00	1150.00
IUUC-Oan-073187	Ornithorhynchus anatinus	52.05	0.00e+00	1060.00
IUUC-Ocu-074619	Oryctolagus cuniculus	52.55	0.00e+00	1172.00
IUUC-Oba-075091	Oryza barthii	75.67	0.00e+00	2157.00
IUUC-Obr-076425	Oryza brachyantha	84.44	0.00e+00	2959.00
IUUC-Ogu-078794	Oryza glumaepatula	92.25	0.00e+00	2073.00
IUUC-Oin-079725	Oryza indica	90.71	0.00e+00	2028.00
IUUC-Olo-080842	Oryza longistaminata	78.58	0.00e+00	2687.00
IUUC-Ome-081818	Oryza meridionalis	92.16	0.00e+00	2072.00
IUUC-Oni-082879	Oryza nivara	91.43	0.00e+00	2048.00
IUUC-Opu-083361	Oryza punctata	91.37	0.00e+00	2070.00
IUUC-Oru-084781	Oryza rufipogon	92.25	0.00e+00	2076.00
IUUC-Osa-086293	Oryza sativa	92.25	0.00e+00	2076.00
IUUC-Ola-086881	Oryzias latipes	51.13	0.00e+00	1135.00
IUUC-Olu-087674	Ostreococcus lucimarinus	53.37	0.00e+00	1136.00
IUUC-Oga-089056	Otolemur garnettii	52.46	0.00e+00	1169.00
IUUC-Oar-089457	Ovis aries	52.55	0.00e+00	1167.00
IUUC-Ptr-091179	Pan troglodytes	52.42	0.00e+00	1148.00
IUUC-Pan-092019	Papio anubis	52.23	0.00e+00	1159.00
IUUC-Psi-093407	Pelodiscus sinensis	51.49	0.00e+00	1137.00
IUUC-Pma-094272	Petromyzon marinus	51.91	0.00e+00	1067.00
IUUC-Pno-094864	Phaeosphaeria nodorum	29.75	5.00e-130	458.00
IUUC-Ppa-095885	Physcomitrella patens	74.44	0.00e+00	1652.00
IUUC-Pfo-096083	Poecilia formosa	51.88	0.00e+00	1150.00
IUUC-Pab-098652	Pongo abelii	50.53	0.00e+00	1065.00
IUUC-Pop-099593	Populus trichocarpa	80.78	0.00e+00	1804.00
IUUC-Pca-100189	Procavia capensis	49.70	0.00e+00	642.00
IUUC-Ppe-101987	Prunus persica	80.61	0.00e+00	1765.00
IUUC-Pva-102605	Pteropus vampyrus	52.38	0.00e+00	1165.00
IUUC-Pgr-103659	Puccinia graminis	24.94	2.00e-77	283.00
IUUC-Ptt-103884	Puccinia triticina	23.94	2.00e-59	224.00
IUUC-Pte-104233	Pyrenophora teres	29.91	5.00e-134	471.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	30.05	2.00e-130	459.00
IUUC-Rno-106004	Rattus norvegicus	52.55	0.00e+00	1170.00
IUUC-Sha-106726	Sarcophilus harrisii	50.98	0.00e+00	1041.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	24.31	7.00e-80	291.00
IUUC-Spo-108029	Schizosaccharomyces pombe	26.09	8.00e-112	397.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	28.37	3.00e-107	382.00
IUUC-Smo-108808	Selaginella moellendorffii	74.50	0.00e+00	1735.00
IUUC-Sit-109735	Setaria italica	91.47	0.00e+00	3212.00
IUUC-Sly-111520	Solanum lycopersicum	80.09	0.00e+00	1829.00
IUUC-Sar-113606	Sorex araneus	53.31	2.00e-66	246.00
IUUC-Sre-114936	Sporisorium reilianum	25.83	3.00e-68	253.00
IUUC-Ssc-116038	Sus scrofa	52.46	0.00e+00	1168.00
IUUC-Tgu-117512	Taeniopygia guttata	51.56	0.00e+00	1154.00
IUUC-Tru-117593	Takifugu rubripes	50.82	0.00e+00	1132.00
IUUC-Tsy-119513	Tarsius syrichta	51.50	1.00e-178	619.00
IUUC-Tni-120551	Tetraodon nigroviridis	47.84	0.00e+00	895.00
IUUC-Tca-121505	Theobroma cacao	81.77	0.00e+00	1820.00
IUUC-Tre-122136	Trichoderma reesei	27.19	4.00e-113	402.00
IUUC-Tvi-122512	Trichoderma virens	28.18	3.00e-122	432.00
IUUC-Tae-124186	Triticum aestivum	90.90	0.00e+00	2056.00
IUUC-Tur-126451	Triticum urartu	90.50	0.00e+00	1843.00
IUUC-Tme-127057	Tuber melanosporum	30.29	1.00e-122	433.00
IUUC-Ttr-128891	Tursiops truncatus	49.93	0.00e+00	722.00
IUUC-Uma-129583	Ustilago maydis	27.64	5.00e-69	256.00
IUUC-Vda-129870	Verticillium dahliae	26.56	2.00e-106	380.00
IUUC-Vpa-130117	Vicugna pacos	50.33	0.00e+00	891.00
IUUC-Vvi-131033	Vitis vinifera	81.24	0.00e+00	1848.00
IUUC-Xtr-131987	Xenopus tropicalis	50.95	0.00e+00	1132.00
IUUC-Xma-134117	Xiphophorus maculatus	51.05	0.00e+00	1119.00
IUUC-Zma-134758	Zea mays	96.39	0.00e+00	2149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence