iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131319

UUCD1 version

UUC-ViV-00290

Ensembl Protein ID

VIT_18s0164g00020.t01

UniProt Accession

D7TXU7; D7TXU7_VITVI

Genbank Protein ID

CBI35322.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596259

Gene Name

VIT_18s0164g00020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0164g00020	VIT_18s0164g00020.t01	VIT_18s0164g00020.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-44	146.3	102	138
UBD/Beta-Prp	2.20e-67	227.9	50	229

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+dsv++l+f  d  ll+sGs Dg +k+WD ++g+l
   Q: 102  GHKDSVCSLDFsADgQLLASGSFDGFVKIWDASSGDL 138
           8***********6669***************999886 PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           + + +h+++gh+ ++++++ sp +   +++G+ d+   +w++  g +    l gh+++v+++ ++ dg+ll+sGs D++v++Wd ++g
   Q: 50   ADDSMHIFTGHTGELYTVACSPmDARLVATGGGDDKGFIWKIFDGDWAF-ELGGHKDSVCSLDFSADGQLLASGSFDGFVKIWDASSG 136
           56789*****************5559999**************999998.9************************************* PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           +l  tl+g   + ++++ +++ g  +++gs+d tv +w+  ++  ++ + gh + v++ +f+p+++ + +gs+D ++riW+ rsg+++
   Q: 137  DLKGTLEG-PGGGIEWVRWHPRGHLVLAGSEDCTVWMWNADRSAYLNMFSGHASSVTCGNFTPDGKTICTGSDDATLRIWNPRSGENT 223
           *******9.******************************************************************************* PP
   S: 258  ktlqlh 263
           +++ +h
   Q: 224  HVVRGH 229
           *99887 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNDPAHHDED EDQGDVFIDE NDVVQEITVD DEDLPDVEGE DDDAEDFEEA DDSMHIFTGH 60
TGELYTVACS PMDARLVATG GGDDKGFIWK IFDGDWAFEL GGHKDSVCSL DFSADGQLLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTAGTTTCA ATGTTTTCCT AAACCCAACC CAAATTACAG CATCCATAAT CTCCAAAATC 60
TCGTTGGATT TGGTTCCAAA GTTTCAACCC AGTGAAGAAT CATTTTGCCC CATGAAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

vvi:100256222

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	52.57	9.00e-121	426.00
IUUC-Aml-001781	Ailuropoda melanoleuca	33.72	4.00e-57	214.00
IUUC-Atr-003169	Amborella trichopoda	70.21	4.00e-145	506.00
IUUC-Aca-004594	Anolis carolinensis	35.47	2.00e-57	215.00
IUUC-Aly-006277	Arabidopsis lyrata	65.12	3.00e-131	460.00
IUUC-Ath-007701	Arabidopsis thaliana	69.30	6.00e-143	499.00
IUUC-Ame-011651	Astyanax mexicanus	32.47	4.00e-51	194.00
IUUC-Bta-012833	Bos taurus	33.72	1.00e-56	212.00
IUUC-Bdi-014831	Brachypodium distachyon	61.76	1.00e-127	448.00
IUUC-Bol-015313	Brassica oleracea	65.66	7.00e-148	516.00
IUUC-Bra-017115	Brassica rapa	64.57	9.00e-130	455.00
IUUC-Cel-018305	Caenorhabditis elegans	26.60	4.00e-29	121.00
IUUC-Cja-019433	Callithrix jacchus	33.72	3.00e-56	211.00
IUUC-Cfa-020093	Canis familiaris	34.01	2.00e-57	215.00
IUUC-Cpo-021742	Cavia porcellus	33.72	2.00e-56	212.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	43.10	8.00e-72	263.00
IUUC-Csa-023498	Chlorocebus sabaeus	33.72	1.00e-56	212.00
IUUC-Cho-024628	Choloepus hoffmanni	34.91	5.00e-45	174.00
IUUC-Cin-025244	Ciona intestinalis	33.33	3.00e-52	197.00
IUUC-Csv-026218	Ciona savignyi	33.92	5.00e-51	194.00
IUUC-Dre-028528	Danio rerio	33.04	3.00e-53	201.00
IUUC-Dno-029297	Dasypus novemcinctus	33.72	3.00e-56	211.00
IUUC-Eca-034277	Equus caballus	33.72	4.00e-56	211.00
IUUC-Fca-036115	Felis catus	34.01	3.00e-57	214.00
IUUC-Fal-036864	Ficedula albicollis	36.34	1.00e-62	232.00
IUUC-Gmo-039090	Gadus morhua	32.35	1.00e-38	152.00
IUUC-Gga-040545	Gallus gallus	36.63	4.00e-63	234.00
IUUC-Gac-042027	Gasterosteus aculeatus	36.95	1.00e-62	233.00
IUUC-Gma-044168	Glycine max	66.84	2.00e-143	500.00
IUUC-Ggo-045036	Gorilla gorilla	33.72	3.00e-56	211.00
IUUC-Hsa-046749	Homo sapiens	33.72	3.00e-56	211.00
IUUC-Hvu-047217	Hordeum vulgare	58.61	5.00e-127	446.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	33.72	2.00e-56	212.00
IUUC-Kpa-049147	Komagataella pastoris	25.83	2.00e-24	106.00
IUUC-Lch-049747	Latimeria chalumnae	31.68	2.00e-46	179.00
IUUC-Lpe-051433	Leersia perrieri	61.05	2.00e-127	447.00
IUUC-Loc-052406	Lepisosteus oculatus	36.26	9.00e-62	229.00
IUUC-Laf-053901	Loxodonta africana	33.72	4.00e-56	211.00
IUUC-Mcc-054990	Macaca mulatta	33.72	3.00e-56	211.00
IUUC-Meu-056844	Macropus eugenii	34.88	6.00e-56	210.00
IUUC-Mtr-057759	Medicago truncatula	67.46	4.00e-130	456.00
IUUC-Mla-058856	Melampsora laricipopulina	32.30	2.00e-47	182.00
IUUC-Mga-059749	Meleagris gallopavo	36.34	6.00e-62	230.00
IUUC-Mvi-060237	Microbotryum violaceum	32.10	1.00e-51	196.00
IUUC-Mmr-061270	Microcebus murinus	32.41	3.00e-53	201.00
IUUC-Mdo-062965	Monodelphis domestica	34.01	2.00e-56	212.00
IUUC-Mmu-064081	Mus musculus	33.72	3.00e-56	211.00
IUUC-Mpu-066355	Mustela putorius furo	34.01	3.00e-57	214.00
IUUC-Mlu-067630	Myotis lucifugus	33.62	5.00e-55	207.00
IUUC-Nle-069701	Nomascus leucogenys	33.72	3.00e-56	211.00
IUUC-Ont-072614	Oreochromis niloticus	34.02	2.00e-58	219.00
IUUC-Ocu-073912	Oryctolagus cuniculus	34.01	1.00e-56	213.00
IUUC-Oba-075195	Oryza barthii	62.08	1.00e-125	441.00
IUUC-Obr-076059	Oryza brachyantha	60.77	7.00e-129	452.00
IUUC-Ogl-077318	Oryza glaberrima	61.36	8.00e-129	452.00
IUUC-Ogu-078579	Oryza glumaepatula	61.70	2.00e-126	444.00
IUUC-Oin-079340	Oryza indica	61.36	8.00e-129	452.00
IUUC-Olo-080813	Oryza longistaminata	62.61	3.00e-127	447.00
IUUC-Ome-081420	Oryza meridionalis	62.69	5.00e-126	442.00
IUUC-Oni-082650	Oryza nivara	62.08	1.00e-125	441.00
IUUC-Opu-083832	Oryza punctata	62.08	2.00e-125	441.00
IUUC-Oru-084207	Oryza rufipogon	62.08	1.00e-125	441.00
IUUC-Osa-085708	Oryza sativa	61.36	8.00e-129	452.00
IUUC-Ola-087164	Oryzias latipes	34.60	3.00e-58	218.00
IUUC-Olu-087824	Ostreococcus lucimarinus	44.85	7.00e-67	246.00
IUUC-Oar-090115	Ovis aries	33.72	2.00e-56	212.00
IUUC-Ptr-091398	Pan troglodytes	33.72	3.00e-56	211.00
IUUC-Pan-092002	Papio anubis	33.72	2.00e-56	211.00
IUUC-Psi-093979	Pelodiscus sinensis	37.20	5.00e-31	126.00
IUUC-Pma-094618	Petromyzon marinus	31.14	8.00e-50	190.00
IUUC-Ppa-095351	Physcomitrella patens	54.14	6.00e-123	432.00
IUUC-Pfo-097078	Poecilia formosa	34.90	3.00e-58	218.00
IUUC-Pab-098540	Pongo abelii	33.72	3.00e-56	211.00
IUUC-Pop-099140	Populus trichocarpa	71.83	6.00e-160	555.00
IUUC-Pca-101072	Procavia capensis	34.32	2.00e-54	205.00
IUUC-Ptt-103756	Puccinia triticina	33.47	5.00e-35	140.00
IUUC-Rno-105672	Rattus norvegicus	33.72	2.00e-56	212.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	30.81	2.00e-46	178.00
IUUC-Spo-108208	Schizosaccharomyces pombe	29.19	2.00e-50	192.00
IUUC-Smo-109093	Selaginella moellendorffii	52.31	2.00e-107	381.00
IUUC-Sit-109978	Setaria italica	64.01	8.00e-135	472.00
IUUC-Sly-111316	Solanum lycopersicum	74.34	3.00e-152	530.00
IUUC-Stu-111956	Solanum tuberosum	73.75	1.00e-150	524.00
IUUC-Sbi-114189	Sorghum bicolor	63.13	6.00e-129	452.00
IUUC-Sre-115029	Sporisorium reilianum	36.80	2.00e-53	202.00
IUUC-Tgu-117514	Taeniopygia guttata	36.05	4.00e-62	231.00
IUUC-Tru-117851	Takifugu rubripes	34.29	6.00e-59	220.00
IUUC-Tsy-119140	Tarsius syrichta	31.50	2.00e-48	185.00
IUUC-Tni-120248	Tetraodon nigroviridis	35.69	1.00e-60	226.00
IUUC-Tae-123968	Triticum aestivum	58.87	2.00e-127	447.00
IUUC-Tur-126174	Triticum urartu	56.10	6.00e-123	432.00
IUUC-Ttr-128182	Tursiops truncatus	33.14	3.00e-55	208.00
IUUC-Uma-129624	Ustilago maydis	35.59	3.00e-52	198.00
IUUC-Vpa-130605	Vicugna pacos	31.60	1.00e-41	163.00
IUUC-Xtr-132193	Xenopus tropicalis	35.92	4.00e-63	234.00
IUUC-Xma-133880	Xiphophorus maculatus	34.90	2.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence