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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-104852
UUCD1 version UUC-RaN-00663
Ensembl Protein ID ENSRNOP00000002180.6
UniProt Accession F1M9Q3; F1M9Q3_RAT
Genbank Protein ID ENSRNOP00000002180
Protein Name Listerin E3 ubiquitin protein ligase 1
Genbank Nucleotide ID AABR07033551
Gene Name Ltn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000001602.8 ENSRNOT00000002180.7 ENSRNOP00000002180.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 85.50 0.00e+00 2973.00 IUUC-Hsa-047016
E3 activity/RING/RING 92.82 0.00e+00 3207.00 IUUC-Mmu-064389
E3 activity/RING/RING 32.20 6.00e-46 182.00 IUUC-Sce-106305
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSPLPARGTG SCGPAVSTSP LQTETPAATA TMGGKNKQRT KGNLRPSNSG RAAELLAKEQ 60
GTVPGFIGFG TSHSDLGYVP AIQGAEDIDS LVDSDFRMVL RKLSKKDVTT KLKAMQEFGT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104852|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAGGCTGGG AGGGCGAGGG GGAAGTGGCT ACAATGAGTC CCCTTCCGGC GCGAGGGACC 60
GGAAGTTGTG GTCCGGCGGT GTCAACTTCG CCTCTGCAGA CTGAGACCCC GGCCGCCACC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104852|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF13639--zf-RING_2
SMART

SM00744--RINGv
Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000717 Aegilops tauschii 41.67 2.00e-47 185.00
IUUC-Aml-002311 Ailuropoda melanoleuca 84.62 0.00e+00 2870.00
IUUC-Atr-002905 Amborella trichopoda 40.48 2.00e-48 189.00
IUUC-Apl-003323 Anas platyrhynchos 65.52 0.00e+00 2106.00
IUUC-Aca-004616 Anolis carolinensis 63.15 0.00e+00 2086.00
IUUC-Aly-006145 Arabidopsis lyrata 39.80 4.00e-44 174.00
IUUC-Ath-006844 Arabidopsis thaliana 41.29 9.00e-47 183.00
IUUC-Ago-007750 Ashbya gossypii 32.33 7.00e-45 176.00
IUUC-Acl-008369 Aspergillus clavatus 29.50 5.00e-40 160.00
IUUC-Afl-008540 Aspergillus flavus 33.44 1.00e-40 162.00
IUUC-Afu-009089 Aspergillus fumigatus 32.23 3.00e-41 164.00
IUUC-Ani-009292 Aspergillus nidulans 32.11 3.00e-39 158.00
IUUC-Ang-009715 Aspergillus niger 30.05 2.00e-37 151.00
IUUC-Aor-009887 Aspergillus oryzae 33.44 9.00e-41 162.00
IUUC-Ate-010308 Aspergillus terreus 28.33 1.00e-30 129.00
IUUC-Ame-011345 Astyanax mexicanus 52.41 0.00e+00 1658.00
IUUC-Bgr-012196 Blumeria graminis 26.89 4.00e-19 91.30
IUUC-Bta-012535 Bos taurus 84.00 0.00e+00 2879.00
IUUC-Bci-013630 Botrytis cinerea 32.33 2.00e-41 165.00
IUUC-Bdi-014142 Brachypodium distachyon 43.63 5.00e-50 194.00
IUUC-Bol-015333 Brassica oleracea 40.00 6.00e-46 180.00
IUUC-Cel-018254 Caenorhabditis elegans 40.95 2.00e-44 175.00
IUUC-Cja-019469 Callithrix jacchus 85.60 0.00e+00 2964.00
IUUC-Cfa-020640 Canis familiaris 84.30 0.00e+00 2880.00
IUUC-Cpo-021322 Cavia porcellus 81.78 0.00e+00 2446.00
IUUC-Cre-022677 Chlamydomonas reinhardtii 37.98 9.00e-36 145.00
IUUC-Csa-024234 Chlorocebus sabaeus 86.53 0.00e+00 2899.00
IUUC-Cho-024709 Choloepus hoffmanni 74.18 0.00e+00 1900.00
IUUC-Csv-026100 Ciona savignyi 26.28 9.00e-70 259.00
IUUC-Cgl-026482 Colletotrichum gloeosporioides 25.70 2.00e-13 72.80
IUUC-Cne-026789 Cryptococcus neoformans 32.47 3.00e-37 151.00
IUUC-Cme-027135 Cyanidioschyzon merolae 33.78 3.00e-12 68.90
IUUC-Dre-027405 Danio rerio 51.82 0.00e+00 1612.00
IUUC-Dno-029874 Dasypus novemcinctus 80.40 0.00e+00 2229.00
IUUC-Dor-030589 Dipodomys ordii 89.99 0.00e+00 1328.00
IUUC-Dse-031427 Dothistroma septosporum 30.87 9.00e-41 163.00
IUUC-Dme-031827 Drosophila melanogaster 30.45 1.00e-72 268.00
IUUC-Ete-032459 Echinops telfairi 66.30 0.00e+00 810.00
IUUC-Eca-033218 Equus caballus 85.64 0.00e+00 2909.00
IUUC-Eeu-035299 Erinaceus europaeus 70.76 0.00e+00 1829.00
IUUC-Fca-036081 Felis catus 84.72 0.00e+00 2874.00
IUUC-Fal-037561 Ficedula albicollis 65.48 0.00e+00 2105.00
IUUC-Fox-037930 Fusarium oxysporum 29.00 6.00e-40 160.00
IUUC-Fso-038413 Fusarium solani 26.84 3.00e-38 154.00
IUUC-Gmo-039359 Gadus morhua 48.66 0.00e+00 1527.00
IUUC-Ggr-039744 Gaeumannomyces graminis 30.10 3.00e-38 154.00
IUUC-Gga-041175 Gallus gallus 65.37 0.00e+00 2164.00
IUUC-Gac-041943 Gasterosteus aculeatus 47.66 0.00e+00 1507.00
IUUC-Gma-043888 Glycine max 39.61 1.00e-47 186.00
IUUC-Ggo-044912 Gorilla gorilla 82.20 0.00e+00 1735.00
IUUC-Hsa-047016 Homo sapiens 85.99 0.00e+00 2971.00
IUUC-Hvu-047059 Hordeum vulgare 42.65 7.00e-49 190.00
IUUC-Itr-048789 Ictidomys tridecemlineatus 91.18 0.00e+00 1417.00
IUUC-Kpa-049133 Komagataella pastoris 30.56 3.00e-38 154.00
IUUC-Lch-049879 Latimeria chalumnae 52.23 0.00e+00 1531.00
IUUC-Lpe-051455 Leersia perrieri 42.11 2.00e-49 192.00
IUUC-Loc-052799 Lepisosteus oculatus 54.23 0.00e+00 1853.00
IUUC-Lma-052972 Leptosphaeria maculans 29.55 9.00e-39 156.00
IUUC-Laf-053479 Loxodonta africana 79.86 0.00e+00 2736.00
IUUC-Mcc-055120 Macaca mulatta 86.70 0.00e+00 2954.00
IUUC-Meu-055932 Macropus eugenii 71.96 0.00e+00 739.00
IUUC-Mor-057209 Magnaporthe oryzae 33.66 1.00e-41 166.00
IUUC-Mpo-057581 Magnaporthe poae 29.80 7.00e-35 143.00
IUUC-Mtr-058499 Medicago truncatula 41.06 7.00e-49 190.00
IUUC-Mla-059169 Melampsora laricipopulina 46.97 7.00e-37 145.00
IUUC-Mga-059800 Meleagris gallopavo 65.41 0.00e+00 2134.00
IUUC-Mvi-060350 Microbotryum violaceum 36.16 7.00e-54 206.00
IUUC-Mmr-061548 Microcebus murinus 85.13 0.00e+00 2971.00
IUUC-Mdo-062405 Monodelphis domestica 68.50 0.00e+00 2268.00
IUUC-Mmu-064389 Mus musculus 92.71 0.00e+00 3139.00
IUUC-Mac-064596 Musa acuminata 32.32 3.00e-51 197.00
IUUC-Mpu-065687 Mustela putorius furo 84.95 0.00e+00 2902.00
IUUC-Mlu-067591 Myotis lucifugus 79.59 0.00e+00 2637.00
IUUC-Nfi-068298 Neosartorya fischeri 28.76 7.00e-41 163.00
IUUC-Ncr-068876 Neurospora crassa 32.67 1.00e-42 169.00
IUUC-Nle-069799 Nomascus leucogenys 85.83 0.00e+00 2948.00
IUUC-Opr-071155 Ochotona princeps 68.76 0.00e+00 1139.00
IUUC-Ont-071290 Oreochromis niloticus 48.86 0.00e+00 1593.00
IUUC-Ocu-074947 Oryctolagus cuniculus 85.88 0.00e+00 2918.00
IUUC-Oba-075986 Oryza barthii 42.11 9.00e-50 193.00
IUUC-Obr-076304 Oryza brachyantha 43.14 3.00e-49 191.00
IUUC-Ogl-077600 Oryza glaberrima 42.11 1.00e-49 192.00
IUUC-Ogu-078079 Oryza glumaepatula 42.11 1.00e-49 192.00
IUUC-Oin-079935 Oryza indica 42.11 9.00e-50 193.00
IUUC-Olo-080897 Oryza longistaminata 42.11 1.00e-49 192.00
IUUC-Ome-081777 Oryza meridionalis 42.11 1.00e-49 192.00
IUUC-Oni-082298 Oryza nivara 42.11 9.00e-50 193.00
IUUC-Opu-083156 Oryza punctata 42.11 2.00e-49 192.00
IUUC-Oru-085243 Oryza rufipogon 42.11 8.00e-50 193.00
IUUC-Osa-086219 Oryza sativa 42.11 1.00e-49 192.00
IUUC-Ola-087202 Oryzias latipes 47.28 0.00e+00 1524.00
IUUC-Olu-087800 Ostreococcus lucimarinus 34.73 3.00e-42 168.00
IUUC-Oga-088962 Otolemur garnettii 85.51 0.00e+00 3004.00
IUUC-Oar-089858 Ovis aries 83.89 0.00e+00 2893.00
IUUC-Ptr-090958 Pan troglodytes 86.27 0.00e+00 2978.00
IUUC-Pan-092712 Papio anubis 86.17 0.00e+00 3007.00
IUUC-Psi-093557 Pelodiscus sinensis 66.57 0.00e+00 2311.00
IUUC-Pma-094131 Petromyzon marinus 56.14 2.00e-127 449.00
IUUC-Pno-094947 Phaeosphaeria nodorum 28.84 2.00e-37 152.00
IUUC-Ppa-095258 Physcomitrella patens 43.14 3.00e-52 201.00
IUUC-Pfo-097035 Poecilia formosa 48.64 0.00e+00 1522.00
IUUC-Pab-097897 Pongo abelii 86.07 0.00e+00 2807.00
IUUC-Pop-099487 Populus trichocarpa 40.00 4.00e-47 184.00
IUUC-Pca-100688 Procavia capensis 63.74 0.00e+00 1307.00
IUUC-Ppe-101821 Prunus persica 39.52 4.00e-48 187.00
IUUC-Pva-102632 Pteropus vampyrus 83.13 0.00e+00 1904.00
IUUC-Pgr-103311 Puccinia graminis 36.95 6.00e-53 203.00
IUUC-Ptt-103825 Puccinia triticina 35.14 2.00e-44 175.00
IUUC-Pte-104036 Pyrenophora teres 29.43 1.00e-38 155.00
IUUC-Pyt-104460 Pyrenophora triticirepentis 28.76 3.00e-39 157.00
IUUC-Sce-106305 Saccharomyces cerevisiae 32.20 1.00e-46 182.00
IUUC-Sja-107896 Schizosaccharomyces japonicus 39.71 4.00e-44 174.00
IUUC-Spo-108267 Schizosaccharomyces pombe 36.61 9.00e-47 183.00
IUUC-Smo-109180 Selaginella moellendorffii 27.27 2.00e-48 189.00
IUUC-Sit-110615 Setaria italica 31.60 2.00e-50 195.00
IUUC-Sly-111861 Solanum lycopersicum 41.43 2.00e-49 191.00
IUUC-Stu-112373 Solanum tuberosum 41.43 1.00e-49 192.00
IUUC-Sar-113666 Sorex araneus 77.82 0.00e+00 2130.00
IUUC-Sbi-114597 Sorghum bicolor 43.63 3.00e-50 194.00
IUUC-Sre-114965 Sporisorium reilianum 32.20 2.00e-46 182.00
IUUC-Ssc-115866 Sus scrofa 85.80 0.00e+00 2957.00
IUUC-Tgu-117521 Taeniopygia guttata 65.35 0.00e+00 2163.00
IUUC-Tru-117803 Takifugu rubripes 46.33 0.00e+00 1470.00
IUUC-Tsy-119135 Tarsius syrichta 81.03 0.00e+00 2166.00
IUUC-Tni-119807 Tetraodon nigroviridis 46.49 0.00e+00 1451.00
IUUC-Tca-121036 Theobroma cacao 40.48 1.00e-48 189.00
IUUC-Tre-121942 Trichoderma reesei 29.33 4.00e-39 157.00
IUUC-Tvi-122453 Trichoderma virens 28.67 5.00e-38 154.00
IUUC-Tae-123061 Triticum aestivum 41.67 2.00e-47 185.00
IUUC-Tur-126021 Triticum urartu 41.67 1.00e-47 186.00
IUUC-Tme-126889 Tuber melanosporum 34.29 3.00e-46 181.00
IUUC-Tbe-127297 Tupaia belangeri 72.98 0.00e+00 1160.00
IUUC-Ttr-128745 Tursiops truncatus 84.27 0.00e+00 2927.00
IUUC-Uma-129552 Ustilago maydis 32.88 1.00e-47 186.00
IUUC-Vda-129838 Verticillium dahliae 30.67 2.00e-41 165.00
IUUC-Vpa-130567 Vicugna pacos 85.90 0.00e+00 1534.00
IUUC-Vvi-131418 Vitis vinifera 40.95 8.00e-51 196.00
IUUC-Xtr-132926 Xenopus tropicalis 57.38 0.00e+00 1982.00
IUUC-Xma-134278 Xiphophorus maculatus 48.41 0.00e+00 1516.00
IUUC-Yli-134476 Yarrowia lipolytica 38.10 2.00e-50 195.00
IUUC-Zma-135611 Zea mays 42.31 1.00e-49 192.00
Created Date 25-Jun-2017

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