iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088361

Ensembl Protein ID

ENSOGAP00000006400.2

UniProt Accession

H0WVQ2; H0WVQ2_OTOGA

Genbank Protein ID

ENSOGAP00000006400

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03049356

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000007145.2	ENSOGAT00000007146.2	ENSOGAP00000006400.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 82
           *************************87777777888899977777899********8 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCA CAGTGGGTTT CAAGCCGCTG CTAGGGGATG CACACAGCAT GGACAACCTG 60
GAGAAGCAGC TCATCTGCCC CATCTGCCTG GAGATGTTCT CCAAACCGGT GGTGATCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	97.83	2.00e-134	471.00
IUUC-Bta-013385	Bos taurus	97.90	2.00e-178	618.00
IUUC-Cja-019697	Callithrix jacchus	78.61	2.00e-139	488.00
IUUC-Cfa-020995	Canis familiaris	98.48	4.00e-170	590.00
IUUC-Cpo-021913	Cavia porcellus	95.87	0.00e+00	674.00
IUUC-Cre-022560	Chlamydomonas reinhardtii	44.44	8.00e-06	45.80
IUUC-Csa-023342	Chlorocebus sabaeus	98.06	0.00e+00	651.00
IUUC-Cin-025224	Ciona intestinalis	52.75	4.00e-95	341.00
IUUC-Csv-026374	Ciona savignyi	52.33	6.00e-82	296.00
IUUC-Dre-027562	Danio rerio	69.30	9.00e-146	509.00
IUUC-Dno-029582	Dasypus novemcinctus	98.18	7.00e-172	596.00
IUUC-Dor-031139	Dipodomys ordii	94.46	0.00e+00	644.00
IUUC-Ete-032346	Echinops telfairi	99.51	2.00e-109	388.00
IUUC-Eca-033645	Equus caballus	97.90	3.00e-179	620.00
IUUC-Eeu-035333	Erinaceus europaeus	69.12	8.00e-116	409.00
IUUC-Fca-035865	Felis catus	98.48	0.00e+00	634.00
IUUC-Fal-036978	Ficedula albicollis	73.61	5.00e-168	583.00
IUUC-Gga-040452	Gallus gallus	78.18	6.00e-165	573.00
IUUC-Ggo-044467	Gorilla gorilla	86.57	7.00e-174	603.00
IUUC-Hsa-046379	Homo sapiens	96.39	3.00e-179	620.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	96.42	0.00e+00	644.00
IUUC-Lch-050029	Latimeria chalumnae	78.66	9.00e-154	536.00
IUUC-Loc-051801	Lepisosteus oculatus	80.97	3.00e-136	477.00
IUUC-Laf-054215	Loxodonta africana	96.41	0.00e+00	669.00
IUUC-Mcc-055027	Macaca mulatta	88.06	0.00e+00	635.00
IUUC-Meu-056412	Macropus eugenii	94.15	6.00e-169	586.00
IUUC-Mmr-060920	Microcebus murinus	97.78	0.00e+00	668.00
IUUC-Mdo-062832	Monodelphis domestica	96.35	5.00e-165	573.00
IUUC-Mmu-063707	Mus musculus	94.54	2.00e-180	624.00
IUUC-Mlu-067653	Myotis lucifugus	81.54	9.00e-139	486.00
IUUC-Nle-069020	Nomascus leucogenys	97.50	0.00e+00	643.00
IUUC-Opr-070577	Ochotona princeps	79.78	4.00e-145	507.00
IUUC-Ont-072491	Oreochromis niloticus	62.25	1.00e-120	426.00
IUUC-Oan-073101	Ornithorhynchus anatinus	96.06	7.00e-174	602.00
IUUC-Ocu-074454	Oryctolagus cuniculus	96.16	0.00e+00	638.00
IUUC-Oar-089950	Ovis aries	81.38	1.00e-140	492.00
IUUC-Ptr-090785	Pan troglodytes	86.32	2.00e-173	601.00
IUUC-Pan-092344	Papio anubis	98.33	0.00e+00	654.00
IUUC-Pab-098322	Pongo abelii	94.17	1.00e-175	608.00
IUUC-Pca-100385	Procavia capensis	75.47	5.00e-122	430.00
IUUC-Rno-105134	Rattus norvegicus	94.75	0.00e+00	683.00
IUUC-Sha-106768	Sarcophilus harrisii	96.05	6.00e-178	616.00
IUUC-Tgu-117494	Taeniopygia guttata	80.43	1.00e-158	551.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence