iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100074

Ensembl Protein ID

POPTR_0018s01580.1

UniProt Accession

U5FFG4; U5FFG4_POPTR

Genbank Protein ID

ERP49535.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTR_0018s01580g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s01580	POPTR_0018s01580.1	POPTR_0018s01580.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	38.89	4.70e-02	33.10	IUUC-Sce-106336

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQIQNTKSVK SLLIHTTTST TRHQPPRRPE TQEWRGRACK SLQNNPFVLT KCAATSSDLQ 60
AMNYATSFLF SPESDTSQYD IFLYNTTIRA YAQTSDLKAK AIDLYNNREG GVELPRKVLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAATCC AAAACACCAA AAGTGTTAAA TCACTGCTAA TCCATACAAC AACCAGCACC 60
ACCAGGCACC AACCACCAAG GCGGCCGGAA ACACAAGAAT GGCGGGGCAG AGCCTGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom

PROSITE

PS51375--PPR

Pfam

PF01535--PPR

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0004519--F:endonuclease activity
GO:0003723--F:RNA binding
GO:0009451--P:RNA modification

KEGG

pop:POPTR_0018s01580g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002827	Amborella trichopoda	25.94	6.00e-11	62.00
IUUC-Ath-006990	Arabidopsis thaliana	25.13	1.00e-12	68.60
IUUC-Bdi-014037	Brachypodium distachyon	24.85	7.00e-06	45.10
IUUC-Bol-016246	Brassica oleracea	29.28	2.00e-18	87.80
IUUC-Cre-022907	Chlamydomonas reinhardtii	46.67	1.30e+00	26.90
IUUC-Lpe-050946	Leersia perrieri	26.52	6.00e-17	82.40
IUUC-Lma-052976	Leptosphaeria maculans	36.59	1.50e+00	26.90
IUUC-Mtr-058695	Medicago truncatula	25.97	4.00e-17	82.80
IUUC-Mmr-060598	Microcebus murinus	34.33	3.00e-03	37.00
IUUC-Oba-075207	Oryza barthii	32.60	3.00e-16	80.50
IUUC-Ppe-101884	Prunus persica	25.84	3.00e-23	102.00
IUUC-Sce-106336	Saccharomyces cerevisiae	38.89	2.60e-02	33.10
IUUC-Smo-109647	Selaginella moellendorffii	27.96	2.00e-14	73.60
IUUC-Tca-121040	Theobroma cacao	29.10	7.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence