iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112293

Ensembl Protein ID

PGSC0003DMT400013292

UniProt Accession

M1A2M3; M1A2M3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005186	PGSC0003DMT400013292	PGSC0003DMT400013292

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-30	104.4	264	301
UBD/Beta-Prp	7.50e-49	167.7	221	417

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v c++f  d  +l+sGs Dg+ikvW++rtg +l+
   Q: 264  HDDAVLCVDFsRDsEMLASGSQDGKIKVWRIRTGQCLR 301
           99*********777*********************986 PP

UBD/Beta-Prp

   S: 100  lsfspsgdklvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
            +fsp+g++lvs s d  i+vwd+ +g+  ++       t+  hd++v cv ++ d+ +l+sGs D+++++W+++tg++lr+l+ +h +
   Q: 221  SRFSPDGQFLVSCSVDGFIEVWDHISGKLKKDlqyqadeTFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQ 309
           57999*************************99***************************************************999*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn...... 264
            v+sl f+++g++++s s d+t ++  l++g+ +++++gh++ v++  f+ ++ r++++ssDgs+++Wd ++ ++l+t+  +       
   Q: 310  GVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTFDGSRVITASSDGSVKVWDAKTTECLQTFRPPPplrggd 398
           *******************************************************************************9887777776 PP
   S: 265  ssvisvavlsfgdnvlvlg 283
            sv sv ++  +  +++ +
   Q: 399  ASVNSVHLFPKNTDHIIVC 417
           5666665555555555555 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSTLEIEAR DVIKIVLQFC KENSLHQSFQ TLQNECQVSL NTVDSLETFI ADINSGRWDA 60
VLPQVAQLKL PRKILEDLYE QIVLEMIELR EMDTARAILR QTNVMGVMKQ EQPERYLRLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTGGCGA ATTTCAGTTC ATGGACAAAA CCCTTACATC TCTCTGTGTA TGTATTTTTG 60
TTCGTGATTA TACTCTCAAA AGCAGGGCTT AGCTACGGGA TTTTAAGCTC TCACTCTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008380--P:RNA splicing

KEGG

sot:102601072

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000857	Aegilops tauschii	89.12	5.00e-77	278.00
IUUC-Aml-001330	Ailuropoda melanoleuca	66.99	0.00e+00	738.00
IUUC-Atr-002570	Amborella trichopoda	89.84	0.00e+00	983.00
IUUC-Apl-003826	Anas platyrhynchos	67.61	0.00e+00	713.00
IUUC-Aca-005183	Anolis carolinensis	66.73	0.00e+00	733.00
IUUC-Aly-005632	Arabidopsis lyrata	85.29	0.00e+00	940.00
IUUC-Ath-007219	Arabidopsis thaliana	85.29	0.00e+00	934.00
IUUC-Ame-011374	Astyanax mexicanus	66.02	0.00e+00	732.00
IUUC-Bta-012890	Bos taurus	66.99	0.00e+00	738.00
IUUC-Bdi-014061	Brachypodium distachyon	85.38	0.00e+00	950.00
IUUC-Bol-016332	Brassica oleracea	85.66	0.00e+00	944.00
IUUC-Bra-017612	Brassica rapa	85.69	0.00e+00	947.00
IUUC-Cel-018238	Caenorhabditis elegans	53.62	1.00e-168	585.00
IUUC-Cja-019336	Callithrix jacchus	66.99	0.00e+00	738.00
IUUC-Cfa-021108	Canis familiaris	66.99	0.00e+00	738.00
IUUC-Cpo-022052	Cavia porcellus	66.99	0.00e+00	738.00
IUUC-Cre-022595	Chlamydomonas reinhardtii	67.51	0.00e+00	744.00
IUUC-Csa-023488	Chlorocebus sabaeus	66.99	0.00e+00	738.00
IUUC-Cho-025010	Choloepus hoffmanni	58.98	0.00e+00	632.00
IUUC-Cin-025251	Ciona intestinalis	63.88	0.00e+00	711.00
IUUC-Csv-026092	Ciona savignyi	61.01	0.00e+00	653.00
IUUC-Dre-027382	Danio rerio	66.41	0.00e+00	731.00
IUUC-Dno-029007	Dasypus novemcinctus	67.19	0.00e+00	739.00
IUUC-Dor-030180	Dipodomys ordii	57.11	2.00e-130	457.00
IUUC-Dme-031762	Drosophila melanogaster	62.50	0.00e+00	696.00
IUUC-Ete-032933	Echinops telfairi	65.73	2.00e-175	607.00
IUUC-Eca-033864	Equus caballus	67.26	0.00e+00	729.00
IUUC-Eeu-034635	Erinaceus europaeus	61.05	4.00e-154	536.00
IUUC-Fca-036119	Felis catus	66.99	0.00e+00	738.00
IUUC-Fal-037396	Ficedula albicollis	67.74	0.00e+00	724.00
IUUC-Gmo-038962	Gadus morhua	65.23	0.00e+00	723.00
IUUC-Gga-040134	Gallus gallus	67.19	0.00e+00	740.00
IUUC-Gac-041630	Gasterosteus aculeatus	64.84	0.00e+00	721.00
IUUC-Gma-043928	Glycine max	90.23	0.00e+00	988.00
IUUC-Ggo-045061	Gorilla gorilla	66.73	0.00e+00	733.00
IUUC-Hsa-046215	Homo sapiens	66.99	0.00e+00	738.00
IUUC-Hvu-047799	Hordeum vulgare	86.78	0.00e+00	677.00
IUUC-Itr-048826	Ictidomys tridecemlineatus	66.99	0.00e+00	738.00
IUUC-Lch-050209	Latimeria chalumnae	61.99	0.00e+00	669.00
IUUC-Lpe-050740	Leersia perrieri	87.52	0.00e+00	968.00
IUUC-Loc-052739	Lepisosteus oculatus	61.39	0.00e+00	668.00
IUUC-Laf-053895	Loxodonta africana	66.86	0.00e+00	734.00
IUUC-Mcc-055183	Macaca mulatta	66.99	0.00e+00	738.00
IUUC-Mtr-057730	Medicago truncatula	86.91	0.00e+00	940.00
IUUC-Mga-059222	Meleagris gallopavo	68.42	2.00e-177	613.00
IUUC-Mmr-061749	Microcebus murinus	67.26	0.00e+00	730.00
IUUC-Mdo-062920	Monodelphis domestica	66.80	0.00e+00	737.00
IUUC-Mmu-063228	Mus musculus	66.99	0.00e+00	738.00
IUUC-Mac-065084	Musa acuminata	89.84	0.00e+00	987.00
IUUC-Mpu-066162	Mustela putorius furo	66.99	0.00e+00	738.00
IUUC-Mlu-067471	Myotis lucifugus	66.02	0.00e+00	731.00
IUUC-Nle-070129	Nomascus leucogenys	66.99	0.00e+00	738.00
IUUC-Opr-071176	Ochotona princeps	67.26	0.00e+00	729.00
IUUC-Ont-071830	Oreochromis niloticus	65.82	0.00e+00	732.00
IUUC-Oan-072778	Ornithorhynchus anatinus	67.19	0.00e+00	739.00
IUUC-Ocu-074570	Oryctolagus cuniculus	66.99	0.00e+00	738.00
IUUC-Oba-075507	Oryza barthii	88.11	0.00e+00	971.00
IUUC-Obr-076672	Oryza brachyantha	89.28	0.00e+00	983.00
IUUC-Ogl-077110	Oryza glaberrima	88.11	0.00e+00	971.00
IUUC-Ogu-077976	Oryza glumaepatula	88.11	0.00e+00	971.00
IUUC-Oin-079525	Oryza indica	88.11	0.00e+00	971.00
IUUC-Olo-080391	Oryza longistaminata	85.61	0.00e+00	962.00
IUUC-Oni-082778	Oryza nivara	88.11	0.00e+00	971.00
IUUC-Opu-083710	Oryza punctata	88.11	0.00e+00	970.00
IUUC-Oru-084250	Oryza rufipogon	88.11	0.00e+00	971.00
IUUC-Osa-085363	Oryza sativa	88.11	0.00e+00	971.00
IUUC-Ola-087092	Oryzias latipes	65.43	0.00e+00	726.00
IUUC-Olu-087753	Ostreococcus lucimarinus	55.73	1.00e-154	538.00
IUUC-Oga-088278	Otolemur garnettii	61.32	0.00e+00	655.00
IUUC-Oar-089664	Ovis aries	66.60	0.00e+00	733.00
IUUC-Ptr-090991	Pan troglodytes	66.99	0.00e+00	738.00
IUUC-Pan-092697	Papio anubis	66.99	0.00e+00	738.00
IUUC-Psi-093204	Pelodiscus sinensis	67.54	0.00e+00	723.00
IUUC-Ppa-095325	Physcomitrella patens	83.40	0.00e+00	923.00
IUUC-Pfo-096988	Poecilia formosa	65.62	0.00e+00	729.00
IUUC-Pab-098288	Pongo abelii	66.99	0.00e+00	738.00
IUUC-Pop-098787	Populus trichocarpa	89.02	0.00e+00	973.00
IUUC-Pca-100583	Procavia capensis	62.30	0.00e+00	652.00
IUUC-Ppe-101307	Prunus persica	88.87	0.00e+00	974.00
IUUC-Pva-102711	Pteropus vampyrus	66.99	0.00e+00	738.00
IUUC-Rno-105614	Rattus norvegicus	66.99	0.00e+00	738.00
IUUC-Sha-107017	Sarcophilus harrisii	66.99	0.00e+00	739.00
IUUC-Smo-108800	Selaginella moellendorffii	76.91	0.00e+00	828.00
IUUC-Sit-110278	Setaria italica	87.91	0.00e+00	947.00
IUUC-Sly-111777	Solanum lycopersicum	99.61	0.00e+00	1072.00
IUUC-Sar-112955	Sorex araneus	60.04	0.00e+00	640.00
IUUC-Sbi-114802	Sorghum bicolor	87.33	0.00e+00	939.00
IUUC-Ssc-116054	Sus scrofa	66.99	0.00e+00	738.00
IUUC-Tgu-116909	Taeniopygia guttata	67.12	0.00e+00	731.00
IUUC-Tru-118195	Takifugu rubripes	66.41	0.00e+00	736.00
IUUC-Tsy-119420	Tarsius syrichta	61.52	0.00e+00	657.00
IUUC-Tni-120416	Tetraodon nigroviridis	65.82	0.00e+00	728.00
IUUC-Tca-121653	Theobroma cacao	90.22	0.00e+00	962.00
IUUC-Tae-125609	Triticum aestivum	87.13	0.00e+00	962.00
IUUC-Tur-126197	Triticum urartu	86.34	0.00e+00	689.00
IUUC-Tbe-128009	Tupaia belangeri	67.16	1.00e-139	488.00
IUUC-Ttr-128719	Tursiops truncatus	60.35	0.00e+00	652.00
IUUC-Vpa-130579	Vicugna pacos	66.80	0.00e+00	731.00
IUUC-Vvi-131127	Vitis vinifera	93.19	0.00e+00	1011.00
IUUC-Xtr-132950	Xenopus tropicalis	62.21	0.00e+00	674.00
IUUC-Xma-133537	Xiphophorus maculatus	65.62	0.00e+00	729.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence