iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095604

Ensembl Protein ID

PP1S127_93V6.1

UniProt Accession

Q33BN2; A9SW71; E1C9V4; Q33BN2_PHYPA

Genbank Protein ID

BAE48267.1; BAE48268.1; EDQ64613.1

Protein Name

Predicted protein; Putative polyubiquitin

Genbank Nucleotide ID

AB240583; AB240584; DS545016

Gene Name

ubq1; PHYPADRAFT_189028

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S127_93V6	PP1S127_93V6.1	PP1S127_93V6.1
PP1S127_93V6	PP1S127_93V6.2	PP1S127_93V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	9.20e-85	279.7	78	152
ULD/UDP/UBQ/UBQ_PIM	2.10e-52	175.7	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 2    likvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           +ikvktLtgkeiei+ie+ dtierikerveekeGiPP+qqrli+aGkq++ddkta+dyn+e+gsvLhLvLaLrGG
   Q: 78   MIKVKTLTGKEIEIDIEPYDTIERIKERVEEKEGIPPVQQRLIFAGKQMNDDKTAKDYNIEGGSVLHLVLALRGG 152
           8*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++d+++++K ki+++ g+pp+qq+LI+aGk+L+D++tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDSIQNVKTKIQDKEGIPPDQQRLIFAGKQLEDERTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DSIQNVKTKI QDKEGIPPDQ QRLIFAGKQL EDERTLADYN 60
IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPYDTIE RIKERVEEKE GIPPVQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCTGCTC CACTCCTCAT AAGTGGCAAT TTAGCCTCCA TTTGGTTTTA TGGGTCTGTG 60
CCCATTGTGT GTACTTTGCG GTATTCGAGA GGCTTTGAGT GTTTACAGGG TGCTCGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

KEGG

ppp:PHYPADRAFT_189028

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006536	Arabidopsis lyrata	93.42	8.00e-69	251.00
IUUC-Ath-006811	Arabidopsis thaliana	94.08	1.00e-69	254.00
IUUC-Bdi-014903	Brachypodium distachyon	94.08	1.00e-69	254.00
IUUC-Bol-015848	Brassica oleracea	94.08	1.00e-69	254.00
IUUC-Cre-022655	Chlamydomonas reinhardtii	94.77	2.00e-72	263.00
IUUC-Gma-042815	Glycine max	92.81	4.00e-69	252.00
IUUC-Mtr-058632	Medicago truncatula	78.02	2.00e-64	237.00
IUUC-Mac-064804	Musa acuminata	92.81	1.00e-69	254.00
IUUC-Obr-076856	Oryza brachyantha	94.08	1.00e-69	254.00
IUUC-Ogl-077789	Oryza glaberrima	94.08	1.00e-69	254.00
IUUC-Oin-079241	Oryza indica	94.08	1.00e-69	254.00
IUUC-Oru-084544	Oryza rufipogon	94.08	1.00e-69	254.00
IUUC-Osa-085863	Oryza sativa	94.08	1.00e-69	254.00
IUUC-Pop-098831	Populus trichocarpa	93.46	7.00e-80	288.00
IUUC-Ppe-101565	Prunus persica	93.46	4.00e-79	285.00
IUUC-Sly-111900	Solanum lycopersicum	94.08	9.00e-70	254.00
IUUC-Stu-112424	Solanum tuberosum	94.08	9.00e-70	254.00
IUUC-Sbi-113864	Sorghum bicolor	94.08	1.00e-69	254.00
IUUC-Tae-124695	Triticum aestivum	94.08	1.00e-69	254.00
IUUC-Tur-126750	Triticum urartu	94.08	1.00e-69	254.00
IUUC-Vpa-130121	Vicugna pacos	79.69	2.00e-17	79.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence