iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000701

Ensembl Protein ID

EMT12074

UniProt Accession

M8BZ11; M8BZ11_AEGTA

Genbank Protein ID

EMT12074.1

Protein Name

RING-H2 finger protein ATL2L

Genbank Nucleotide ID

KD551782

Gene Name

F775_05519

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_05519	EMT12074	EMT12074

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-09	37.0	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++   d+ + lp CgH+fh++C+ +w       +++ +CPlCr
   Q: 108  CAVCLAELadGDEARELPnCGHLFHLECVDAW------LRTRTTCPLCR 150
           ********66333888889*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSGNPVAGAP GAAEPYAPQA TYNFSARLAL TVSLVLLMIT VVVVVIPLMV YLMITRSRRG 60
GGHGLAGGIL RSVGMISSRR HGLDASALSA LPVTAYRKES GAAARAECAV CLAELADGDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGGGA ACCCAGTGGC CGGCGCGCCG GGTGCCGCCG AGCCGTATGC GCCGCAGGCG 60
ACCTACAACT TCAGCGCCCG CCTCGCGCTC ACCGTCTCTT TGGTCCTCCT GATGATCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0479--Metal-binding
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_05519

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014715	Brachypodium distachyon	60.77	2.00e-36	144.00
IUUC-Bol-016026	Brassica oleracea	45.33	9.00e-20	89.70
IUUC-Bra-017164	Brassica rapa	47.83	5.00e-20	90.50
IUUC-Cre-022904	Chlamydomonas reinhardtii	57.69	1.00e-07	47.80
IUUC-Dse-031302	Dothistroma septosporum	52.17	6.00e-10	58.90
IUUC-Hvu-047599	Hordeum vulgare	59.87	3.00e-38	150.00
IUUC-Lpe-050704	Leersia perrieri	54.55	2.00e-32	130.00
IUUC-Mtr-057631	Medicago truncatula	41.18	2.00e-20	91.70
IUUC-Mac-065654	Musa acuminata	54.12	7.00e-22	96.70
IUUC-Oba-075107	Oryza barthii	79.55	3.00e-19	87.40
IUUC-Obr-076648	Oryza brachyantha	87.50	4.00e-15	72.80
IUUC-Ogl-077490	Oryza glaberrima	65.17	1.00e-27	115.00
IUUC-Ogu-078358	Oryza glumaepatula	62.89	5.00e-28	117.00
IUUC-Oin-079942	Oryza indica	65.17	2.00e-27	115.00
IUUC-Ome-082017	Oryza meridionalis	66.67	6.00e-28	116.00
IUUC-Oni-083089	Oryza nivara	44.09	1.00e-18	88.60
IUUC-Opu-083965	Oryza punctata	48.26	8.00e-30	122.00
IUUC-Oru-084479	Oryza rufipogon	65.17	1.00e-27	115.00
IUUC-Osa-085613	Oryza sativa	65.17	1.00e-27	115.00
IUUC-Ppa-095331	Physcomitrella patens	52.00	1.00e-18	86.70
IUUC-Sit-110143	Setaria italica	53.70	8.00e-25	106.00
IUUC-Sly-111815	Solanum lycopersicum	38.27	7.00e-14	68.90
IUUC-Stu-112349	Solanum tuberosum	40.48	9.00e-15	71.60
IUUC-Sbi-114595	Sorghum bicolor	48.17	1.00e-34	140.00
IUUC-Tae-123919	Triticum aestivum	99.47	2.00e-58	218.00
IUUC-Tur-126166	Triticum urartu	90.00	4.00e-37	145.00
IUUC-Vvi-130969	Vitis vinifera	46.58	1.00e-18	85.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence