iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000016908.2	ENSCJAT00000039474.2	ENSCJAP00000037366.2
ENSCJAG00000016908.2	ENSCJAT00000011901.2	ENSCJAP00000011277.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.30e-19	69.3	190	227
ULD/UDP/UBQ/UBQ_PIM	8.40e-26	90.7	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 190  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 227
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m +t+ktl++++f+++++++++v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MHVTLKTLQQRTFKIDIDPEEKVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           89*************************************************************************997 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MHVTLKTLQQ RTFKIDIDPE EKVKALKEKI ESEKGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKAV STPAPATTQQ SAPASTTAVT SSTVTTVAQA PTPAPALAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCCGGAGT CACGATGATG GCGGCCACCA TCCTGTGGTG AGCTAGCGGA TTCCTTGCTT 60
GCCTCGCAGA GCCCCTCGCC CCTCCTGCAT TCTCAGTGGC TGGCGCCCGG CAGTGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	93.67	1.00e-86	313.00
IUUC-Ath-006674	Arabidopsis thaliana	39.18	1.00e-38	153.00
IUUC-Ago-007830	Ashbya gossypii	31.47	6.00e-20	91.70
IUUC-Acl-008212	Aspergillus clavatus	47.01	4.00e-19	89.00
IUUC-Afl-008605	Aspergillus flavus	44.12	2.00e-19	90.10
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.40
IUUC-Aor-010032	Aspergillus oryzae	44.12	3.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	40.73	9.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	1.00e-33	137.00
IUUC-Bta-012922	Bos taurus	92.18	1.00e-128	452.00
IUUC-Bdi-014355	Brachypodium distachyon	30.61	1.00e-43	170.00
IUUC-Cfa-020683	Canis familiaris	93.98	2.00e-93	336.00
IUUC-Cpo-022145	Cavia porcellus	91.44	3.00e-131	461.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.87	1.00e-29	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	97.07	2.00e-148	518.00
IUUC-Cin-025741	Ciona intestinalis	41.28	4.00e-36	145.00
IUUC-Csv-025823	Ciona savignyi	38.34	5.00e-40	157.00
IUUC-Cne-027056	Cryptococcus neoformans	46.15	5.00e-15	75.50
IUUC-Dre-028369	Danio rerio	73.66	2.00e-81	296.00
IUUC-Dno-029543	Dasypus novemcinctus	89.98	5.00e-134	470.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Ete-032583	Echinops telfairi	84.68	5.00e-66	244.00
IUUC-Eca-034243	Equus caballus	98.30	8.00e-93	333.00
IUUC-Eeu-034721	Erinaceus europaeus	86.32	3.00e-69	255.00
IUUC-Fca-035679	Felis catus	92.18	3.00e-132	464.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	1.00e-15	77.40
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	4.00e-16	79.00
IUUC-Gga-040544	Gallus gallus	71.94	5.00e-120	424.00
IUUC-Gma-043743	Glycine max	36.14	1.00e-38	154.00
IUUC-Ggo-045125	Gorilla gorilla	99.58	1.00e-96	346.00
IUUC-Hsa-046519	Homo sapiens	99.58	1.00e-96	346.00
IUUC-Hvu-047832	Hordeum vulgare	37.05	2.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	90.71	7.00e-126	443.00
IUUC-Kpa-049314	Komagataella pastoris	37.66	4.00e-30	125.00
IUUC-Lch-050553	Latimeria chalumnae	67.50	2.00e-96	345.00
IUUC-Lpe-050801	Leersia perrieri	36.82	5.00e-34	138.00
IUUC-Lma-053328	Leptosphaeria maculans	47.37	1.00e-12	63.90
IUUC-Laf-054293	Loxodonta africana	94.83	1.00e-122	432.00
IUUC-Mcc-055600	Macaca mulatta	98.87	2.00e-103	368.00
IUUC-Meu-056082	Macropus eugenii	66.79	7.00e-69	254.00
IUUC-Mor-057287	Magnaporthe oryzae	48.72	2.00e-15	77.00
IUUC-Mpo-057609	Magnaporthe poae	46.51	2.00e-15	76.30
IUUC-Mtr-058148	Medicago truncatula	38.22	6.00e-40	158.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	4.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	48.37	1.00e-15	76.60
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.10
IUUC-Mmr-061159	Microcebus murinus	97.06	2.00e-95	342.00
IUUC-Mdo-061967	Monodelphis domestica	83.98	6.00e-119	420.00
IUUC-Mmu-063258	Mus musculus	89.71	3.00e-102	365.00
IUUC-Mpu-066389	Mustela putorius furo	94.09	4.00e-87	314.00
IUUC-Mlu-067999	Myotis lucifugus	89.97	1.00e-117	416.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	9.00e-19	87.40
IUUC-Ncr-068685	Neurospora crassa	44.78	3.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	96.58	1.00e-141	495.00
IUUC-Opr-070234	Ochotona princeps	84.57	9.00e-29	120.00
IUUC-Ont-072484	Oreochromis niloticus	57.04	4.00e-101	361.00
IUUC-Ocu-074831	Oryctolagus cuniculus	82.68	6.00e-130	457.00
IUUC-Ogl-077067	Oryza glaberrima	32.72	5.00e-51	194.00
IUUC-Oin-079203	Oryza indica	32.79	8.00e-51	194.00
IUUC-Opu-083963	Oryza punctata	37.50	2.00e-36	146.00
IUUC-Osa-085951	Oryza sativa	32.79	8.00e-51	194.00
IUUC-Ola-086540	Oryzias latipes	61.94	6.00e-64	238.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.36	3.00e-38	152.00
IUUC-Oga-088023	Otolemur garnettii	88.38	6.00e-134	470.00
IUUC-Oar-089964	Ovis aries	92.51	5.00e-116	410.00
IUUC-Ptr-091165	Pan troglodytes	99.58	2.00e-96	345.00
IUUC-Pan-092009	Papio anubis	96.36	6.00e-141	493.00
IUUC-Psi-093477	Pelodiscus sinensis	85.98	5.00e-82	298.00
IUUC-Ppa-095964	Physcomitrella patens	43.61	1.00e-27	117.00
IUUC-Pfo-097385	Poecilia formosa	64.71	8.00e-70	257.00
IUUC-Pab-097868	Pongo abelii	99.58	6.00e-96	343.00
IUUC-Pop-099774	Populus trichocarpa	37.01	4.00e-37	147.00
IUUC-Pca-100652	Procavia capensis	96.50	7.00e-70	257.00
IUUC-Pva-102137	Pteropus vampyrus	98.31	8.00e-95	340.00
IUUC-Ptt-103717	Puccinia triticina	45.93	1.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	7.00e-20	91.30
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	9.00e-20	91.30
IUUC-Rno-104844	Rattus norvegicus	87.02	7.00e-141	493.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	5.00e-13	68.90
IUUC-Sha-107073	Sarcophilus harrisii	89.83	2.00e-86	312.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.62	2.00e-38	152.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	7.00e-17	81.60
IUUC-Sar-112925	Sorex araneus	88.01	1.00e-84	306.00
IUUC-Sre-114894	Sporisorium reilianum	54.24	2.00e-11	63.20
IUUC-Ssc-116329	Sus scrofa	93.89	3.00e-134	471.00
IUUC-Tru-118651	Takifugu rubripes	62.76	4.00e-72	265.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	1.00e-48	187.00
IUUC-Tvi-122617	Trichoderma virens	52.56	3.00e-18	86.30
IUUC-Tae-125620	Triticum aestivum	35.25	2.00e-36	146.00
IUUC-Tbe-127493	Tupaia belangeri	83.70	1.00e-71	263.00
IUUC-Ttr-128464	Tursiops truncatus	97.74	1.00e-99	356.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.30
IUUC-Vpa-130357	Vicugna pacos	86.57	2.00e-87	315.00
IUUC-Vvi-131039	Vitis vinifera	37.65	1.00e-39	157.00
IUUC-Xtr-132679	Xenopus tropicalis	83.40	8.00e-68	250.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	4.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence