iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_3B_TGACv1_220852_AA0721370	TRIAE_CS42_3B_TGACv1_220852_AA0721370.1	TRIAE_CS42_3B_TGACv1_220852_AA0721370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-24	85.4	334	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
           +v+c+++  d t+lvsGsdD ++++W 
   Q: 334  RVFCVKYtYDgTYLVSGSDDTNLRLWK 360
           69*****9556***************8 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MRVKVISRST DDFTRERSQD LQKVFRNYDP ALRSQEKAVE YTRALNAAKL EKIFARPFIG 60
AMDGHIDAVS CMAKNMNYVK AMFSGSMDGD IRLWDIAARK TVCQFPGHQG AVRGLATSTD 120

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Nucleotide Sequence
(Fasta)

CTGTTGTTTT CTACGGCCGC CGATCTTTGC TTCGAAGCCT TCTACTCCTC TCTCCCTTTT 60
GTTCCCCCTC GACGGCGGCG GCGGCGGCGG CGGCAACCAG GGTTTAGAGG AGGAGAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009370	Aspergillus nidulans	43.64	3.00e-103	369.00
IUUC-Ate-010434	Aspergillus terreus	44.84	1.00e-87	317.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	62.58	1.00e-60	225.00
IUUC-Csv-026197	Ciona savignyi	46.44	2.00e-124	439.00
IUUC-Mvi-060370	Microbotryum violaceum	41.69	2.00e-67	250.00
IUUC-Ncr-068848	Neurospora crassa	40.09	2.00e-94	340.00
IUUC-Tre-122243	Trichoderma reesei	40.75	3.00e-96	346.00
IUUC-Tvi-122293	Trichoderma virens	43.02	3.00e-98	352.00
IUUC-Vda-129768	Verticillium dahliae	39.78	1.00e-90	327.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence