iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104823

Ensembl Protein ID

EDU41877

UniProt Accession

B2WFX0; B2WFX0_PYRTR

Genbank Protein ID

EDU41877.1

Protein Name

Postreplication repair E3 ubiquitin-protein ligase rad18

Genbank Nucleotide ID

DS231624

Gene Name

PTRG_08826

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_08826	EDU41877	EDU41877

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-08	34.1	26	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           ++++C I +e  ++Pv++ + +t+   +I++++  +gk cP +++  ++++l Pn+++r+++ ++ 
   Q: 26   AALRCEICKEFYNNPVITLCHHTFCSICIRRCITMDGK-CPSCMSVCSSDKLGPNIAIREVVIRFQ 90
           6799**********************************.*********************987775 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MDSSFDLPDS TDWIQTTLPS FEPLEAALRC EICKEFYNNP VITLCHHTFC SICIRRCITM 60
DGKCPSCMSV CSSDKLGPNI AIREVVIRFQ EARPKAMELA RADKEAADAD RKKKRKLEDM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCTT CTTTCGATCT CCCTGATTCC ACCGATTGGA TACAAACGAC GCTGCCTTCG 60
TTTGAACCGC TCGAGGCTGC TTTGCGCTGC GAAATCTGCA AGGAATTCTA CAACAACCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR004580--Rad18
IPR003034--SAP_dom
IPR006642--Znf_Rad18_put
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50800--SAP
PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING
SM00513--SAP
SM00734--ZnF_Rad18

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002718	Amborella trichopoda	36.71	5.00e-11	61.60
IUUC-Apl-003657	Anas platyrhynchos	24.74	3.00e-10	58.20
IUUC-Aca-005369	Anolis carolinensis	27.69	4.00e-12	62.00
IUUC-Ath-006986	Arabidopsis thaliana	40.43	1.00e-07	50.80
IUUC-Ago-007876	Ashbya gossypii	34.74	5.00e-17	80.50
IUUC-Acl-008246	Aspergillus clavatus	40.74	4.00e-72	263.00
IUUC-Afl-008666	Aspergillus flavus	41.87	1.00e-76	278.00
IUUC-Afu-009052	Aspergillus fumigatus	42.59	6.00e-75	272.00
IUUC-Ani-009488	Aspergillus nidulans	42.30	1.00e-74	271.00
IUUC-Ang-009681	Aspergillus niger	44.60	3.00e-78	283.00
IUUC-Aor-010037	Aspergillus oryzae	43.85	1.00e-77	281.00
IUUC-Ate-010516	Aspergillus terreus	48.75	7.00e-36	141.00
IUUC-Ame-010630	Astyanax mexicanus	35.96	3.00e-11	61.20
IUUC-Bgr-012178	Blumeria graminis	36.34	5.00e-53	199.00
IUUC-Bci-013680	Botrytis cinerea	36.60	2.00e-56	211.00
IUUC-Bdi-014168	Brachypodium distachyon	36.36	1.00e-08	53.50
IUUC-Bol-016476	Brassica oleracea	36.17	5.00e-07	48.50
IUUC-Bra-017176	Brassica rapa	36.17	6.00e-07	48.10
IUUC-Cja-019453	Callithrix jacchus	30.23	3.00e-09	54.70
IUUC-Cfa-020856	Canis familiaris	29.76	6.00e-09	53.90
IUUC-Cpo-021950	Cavia porcellus	30.95	1.00e-09	55.80
IUUC-Csa-023997	Chlorocebus sabaeus	30.95	2.00e-09	55.50
IUUC-Cho-024771	Choloepus hoffmanni	32.05	7.00e-09	53.50
IUUC-Cin-025364	Ciona intestinalis	34.25	2.00e-08	51.60
IUUC-Cgl-026668	Colletotrichum gloeosporioides	36.54	8.00e-51	192.00
IUUC-Cme-027202	Cyanidioschyzon merolae	34.41	4.00e-14	70.90
IUUC-Dre-028479	Danio rerio	27.32	1.00e-15	75.50
IUUC-Dor-031046	Dipodomys ordii	25.56	1.00e-05	42.70
IUUC-Dse-031235	Dothistroma septosporum	32.78	6.00e-40	156.00
IUUC-Ete-032890	Echinops telfairi	33.80	7.00e-07	46.20
IUUC-Eca-033725	Equus caballus	30.95	2.00e-09	55.10
IUUC-Eeu-034573	Erinaceus europaeus	34.33	3.00e-07	48.10
IUUC-Fca-036495	Felis catus	32.14	2.00e-09	55.50
IUUC-Fal-036791	Ficedula albicollis	22.51	7.00e-14	70.10
IUUC-Fox-037868	Fusarium oxysporum	53.12	9.00e-28	115.00
IUUC-Fso-038144	Fusarium solani	39.04	7.00e-56	209.00
IUUC-Gmo-039152	Gadus morhua	23.17	8.00e-14	69.70
IUUC-Ggr-039737	Gaeumannomyces graminis	35.95	3.00e-50	191.00
IUUC-Gga-040788	Gallus gallus	35.29	1.00e-10	59.70
IUUC-Gac-041993	Gasterosteus aculeatus	25.26	4.00e-12	64.30
IUUC-Ggo-044889	Gorilla gorilla	30.95	2.00e-09	55.80
IUUC-Hsa-045957	Homo sapiens	30.95	2.00e-09	55.50
IUUC-Itr-048998	Ictidomys tridecemlineatus	30.95	2.00e-09	55.50
IUUC-Kpa-049300	Komagataella pastoris	25.95	5.00e-25	106.00
IUUC-Lch-049828	Latimeria chalumnae	40.00	2.00e-10	58.90
IUUC-Loc-052609	Lepisosteus oculatus	32.47	4.00e-09	54.30
IUUC-Lma-053037	Leptosphaeria maculans	67.16	6.00e-123	432.00
IUUC-Laf-053889	Loxodonta africana	31.03	4.00e-10	57.40
IUUC-Mcc-055853	Macaca mulatta	32.14	8.00e-10	56.60
IUUC-Meu-056866	Macropus eugenii	21.80	2.00e-06	45.10
IUUC-Mor-057071	Magnaporthe oryzae	40.50	1.00e-64	238.00
IUUC-Mpo-057628	Magnaporthe poae	35.42	2.00e-28	118.00
IUUC-Mla-058953	Melampsora laricipopulina	35.59	3.00e-13	68.60
IUUC-Mga-059687	Meleagris gallopavo	34.29	8.00e-09	53.10
IUUC-Mvi-060412	Microbotryum violaceum	26.58	1.00e-20	92.80
IUUC-Mmr-061563	Microcebus murinus	30.95	4.00e-09	54.30
IUUC-Mdo-062655	Monodelphis domestica	32.47	6.00e-09	53.90
IUUC-Mmu-063647	Mus musculus	32.14	2.00e-09	55.80
IUUC-Mpu-065778	Mustela putorius furo	30.95	3.00e-09	54.70
IUUC-Mlu-068205	Myotis lucifugus	31.33	4.00e-09	54.30
IUUC-Nfi-068501	Neosartorya fischeri	44.92	2.00e-75	274.00
IUUC-Ncr-068917	Neurospora crassa	34.90	7.00e-55	206.00
IUUC-Nle-068990	Nomascus leucogenys	30.95	2.00e-09	55.50
IUUC-Opr-071146	Ochotona princeps	33.33	5.00e-11	60.50
IUUC-Ont-071835	Oreochromis niloticus	24.21	8.00e-18	83.20
IUUC-Oan-072827	Ornithorhynchus anatinus	30.97	2.00e-11	60.50
IUUC-Ocu-073986	Oryctolagus cuniculus	30.95	6.00e-09	53.90
IUUC-Ola-086997	Oryzias latipes	31.58	2.00e-10	58.20
IUUC-Olu-087771	Ostreococcus lucimarinus	42.11	8.00e-13	66.20
IUUC-Oga-088092	Otolemur garnettii	30.95	6.00e-10	57.40
IUUC-Ptr-091103	Pan troglodytes	30.95	2.00e-09	55.50
IUUC-Pan-092478	Papio anubis	30.95	2.00e-09	55.50
IUUC-Psi-093356	Pelodiscus sinensis	29.76	2.00e-09	55.50
IUUC-Pfo-096663	Poecilia formosa	23.24	6.00e-10	57.00
IUUC-Pab-098515	Pongo abelii	30.95	2.00e-09	55.80
IUUC-Pva-102377	Pteropus vampyrus	31.17	2.00e-08	51.60
IUUC-Pgr-103556	Puccinia graminis	23.18	4.00e-20	90.90
IUUC-Pte-104362	Pyrenophora teres	88.89	0.00e+00	656.00
IUUC-Rno-105866	Rattus norvegicus	32.14	5.00e-10	57.40
IUUC-Sce-106454	Saccharomyces cerevisiae	33.70	2.00e-14	72.40
IUUC-Sha-107515	Sarcophilus harrisii	32.10	2.00e-10	58.20
IUUC-Sja-107689	Schizosaccharomyces japonicus	26.88	2.00e-17	81.60
IUUC-Spo-108248	Schizosaccharomyces pombe	27.86	1.00e-36	145.00
IUUC-Ssl-108430	Sclerotinia sclerotiorum	36.19	3.00e-54	204.00
IUUC-Sly-110850	Solanum lycopersicum	34.04	4.00e-10	58.20
IUUC-Stu-111929	Solanum tuberosum	38.24	1.00e-08	53.50
IUUC-Sar-113591	Sorex araneus	41.18	3.00e-07	49.70
IUUC-Sre-115123	Sporisorium reilianum	30.04	1.00e-15	76.30
IUUC-Tgu-117286	Taeniopygia guttata	33.78	6.00e-10	57.00
IUUC-Tru-117959	Takifugu rubripes	28.19	2.00e-13	68.20
IUUC-Tni-120570	Tetraodon nigroviridis	25.82	5.00e-11	60.10
IUUC-Tre-121893	Trichoderma reesei	42.08	8.00e-65	239.00
IUUC-Tvi-122405	Trichoderma virens	41.37	2.00e-68	250.00
IUUC-Tbe-127758	Tupaia belangeri	32.05	6.00e-09	53.90
IUUC-Uma-129563	Ustilago maydis	28.23	4.00e-12	64.30
IUUC-Vda-130021	Verticillium dahliae	40.31	9.00e-23	98.60
IUUC-Vpa-130169	Vicugna pacos	32.05	1.00e-08	52.40
IUUC-Xtr-132308	Xenopus tropicalis	27.81	3.00e-11	60.80
IUUC-Xma-133868	Xiphophorus maculatus	25.56	2.00e-10	58.20
IUUC-Yli-134474	Yarrowia lipolytica	26.42	2.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence