iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099344

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_570757; POPTR_0013s01460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s01460	POPTR_0013s01460.1	POPTR_0013s01460.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	23.71	8.00e-13	70.50	IUUC-Sce-106382
E3 adaptor/Cullin RING/SCF/F-box	22.67	1.00e-07	53.10	IUUC-Spo-108376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTQSTPILS VLTEDLLIRV NEKLVQDSDR KTWRLICKEF HRVDSITRKT LRVLHVEFLP 60
TLLKNYTNLL TLDLSVCPCI EDGTITLLLH RVDHSMWARN LKFLNLRRAN GLKFAGLEML 120

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Nucleotide Sequence
(Fasta)

ATTGTGGTCA GCCGTACACT AAACCATTCC TTCATCTTCT CCATCTCCTC CACTTCTTCA 60
TTACAATACA AACATTTTCC ATTTTCCTCT GCAACTGTTT CATCACCACC AACCTCATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF13516--LRR_6

SMART

SM00367--LRR_CC

KEGG

pop:POPTR_0013s01460g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004693	Anolis carolinensis	32.42	2.00e-33	136.00
IUUC-Acl-008301	Aspergillus clavatus	28.84	6.00e-25	108.00
IUUC-Afl-008738	Aspergillus flavus	26.50	3.00e-24	106.00
IUUC-Afu-009085	Aspergillus fumigatus	27.02	7.00e-24	105.00
IUUC-Ang-009719	Aspergillus niger	26.39	5.00e-25	108.00
IUUC-Aor-009957	Aspergillus oryzae	26.86	2.00e-24	106.00
IUUC-Ate-010490	Aspergillus terreus	26.08	2.00e-23	103.00
IUUC-Bgr-012097	Blumeria graminis	31.69	1.00e-23	104.00
IUUC-Bci-013923	Botrytis cinerea	27.88	3.00e-19	90.50
IUUC-Bra-017778	Brassica rapa	61.53	0.00e+00	715.00
IUUC-Cin-025116	Ciona intestinalis	32.43	2.00e-29	123.00
IUUC-Cgl-026645	Colletotrichum gloeosporioides	29.12	2.00e-24	107.00
IUUC-Cme-027303	Cyanidioschyzon merolae	29.03	9.00e-20	91.30
IUUC-Dor-030835	Dipodomys ordii	29.21	1.00e-16	80.90
IUUC-Dme-032125	Drosophila melanogaster	28.95	2.00e-27	117.00
IUUC-Ete-033027	Echinops telfairi	27.87	4.00e-28	118.00
IUUC-Hvu-047284	Hordeum vulgare	50.57	1.00e-102	365.00
IUUC-Lma-053046	Leptosphaeria maculans	27.36	2.00e-28	120.00
IUUC-Meu-056341	Macropus eugenii	30.90	5.00e-28	118.00
IUUC-Mpo-057320	Magnaporthe poae	28.18	2.00e-25	110.00
IUUC-Mtr-058542	Medicago truncatula	63.23	0.00e+00	666.00
IUUC-Mla-058932	Melampsora laricipopulina	28.44	5.00e-22	99.40
IUUC-Mga-060160	Meleagris gallopavo	32.76	2.00e-34	139.00
IUUC-Mdo-062490	Monodelphis domestica	32.08	4.00e-33	135.00
IUUC-Nfi-068473	Neosartorya fischeri	27.02	6.00e-24	105.00
IUUC-Ncr-068681	Neurospora crassa	30.08	2.00e-23	103.00
IUUC-Oan-073599	Ornithorhynchus anatinus	31.74	1.00e-32	133.00
IUUC-Osa-085879	Oryza sativa	49.86	8.00e-85	306.00
IUUC-Pno-095105	Phaeosphaeria nodorum	29.74	3.00e-27	115.00
IUUC-Pca-100228	Procavia capensis	30.56	1.00e-26	113.00
IUUC-Pgr-103540	Puccinia graminis	33.74	5.00e-19	89.70
IUUC-Sce-106382	Saccharomyces cerevisiae	24.66	8.00e-21	95.90
IUUC-Sha-107652	Sarcophilus harrisii	32.08	4.00e-33	134.00
IUUC-Sja-107860	Schizosaccharomyces japonicus	25.00	5.00e-20	92.00
IUUC-Spo-108376	Schizosaccharomyces pombe	25.94	1.00e-11	63.50
IUUC-Ssl-108575	Sclerotinia sclerotiorum	32.05	2.00e-19	90.90
IUUC-Sit-110171	Setaria italica	43.45	8.00e-102	364.00
IUUC-Tgu-117483	Taeniopygia guttata	31.86	2.00e-30	125.00
IUUC-Tsy-119203	Tarsius syrichta	30.90	1.00e-32	133.00
IUUC-Tme-127056	Tuber melanosporum	28.31	2.00e-26	113.00
IUUC-Tbe-127372	Tupaia belangeri	31.56	3.00e-28	119.00
IUUC-Vda-130009	Verticillium dahliae	24.48	3.00e-23	103.00
IUUC-Xtr-131847	Xenopus tropicalis	25.75	9.00e-28	117.00
IUUC-Yli-134644	Yarrowia lipolytica	27.95	7.00e-22	99.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence