iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-130009

Ensembl Protein ID

EGY16036

UniProt Accession

G2XB62; G2XB62_VERDV

Genbank Protein ID

EGY16036.1

Protein Name

SCF E3 ubiquitin ligase complex F-box protein grrA

Genbank Nucleotide ID

DS572710

Gene Name

VDAG_07200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_07200	EGY16036	EGY16036

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	37.63	3.00e-96	348.00	IUUC-Sce-106382
E3 adaptor/Cullin RING/SCF/F-box	30.43	4.00e-57	217.00	IUUC-Spo-108376
E3 adaptor/Cullin RING/SCF/F-box	43.18	2.00e-112	401.00	IUUC-Ots-000001

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MIAAQSSGSG GAPLHPEDSR SSSSTNSPAP ADNEESDFFH GGNDSVSSLG VPNIEDMQVS 60
DVDDECLTGI ALLPNEIIIS VFAKLNTTSD LFHCMLVSKR WAKNAVDLLW HRPACTNWRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAGCCG CCCAGTCATC GGGCAGCGGT GGCGCGCCCC TCCACCCCGA AGACTCTCGA 60
TCTTCCTCCT CGACAAACTC GCCTGCTCCG GCTGATAACG AAGAATCCGA CTTTTTCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like
PF13516--LRR_6

SMART

SM00367--LRR_CC

Gene Ontology

GO:0016874--F:ligase activity

KEGG

vda:VDAG_07200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000881	Aegilops tauschii	22.46	1.00e-22	100.00
IUUC-Atr-002749	Amborella trichopoda	30.04	4.00e-29	121.00
IUUC-Aly-006077	Arabidopsis lyrata	24.75	2.00e-28	119.00
IUUC-Ath-006696	Arabidopsis thaliana	29.35	1.00e-30	125.00
IUUC-Ago-007921	Ashbya gossypii	38.51	4.00e-96	344.00
IUUC-Acl-008301	Aspergillus clavatus	55.90	2.00e-161	560.00
IUUC-Afl-008738	Aspergillus flavus	55.64	1.00e-162	564.00
IUUC-Afu-009085	Aspergillus fumigatus	56.78	1.00e-164	570.00
IUUC-Ani-009369	Aspergillus nidulans	55.34	4.00e-162	562.00
IUUC-Ang-009719	Aspergillus niger	57.06	1.00e-163	567.00
IUUC-Aor-009957	Aspergillus oryzae	55.64	9.00e-163	565.00
IUUC-Ate-010490	Aspergillus terreus	56.37	2.00e-161	560.00
IUUC-Ame-011331	Astyanax mexicanus	27.61	2.00e-37	148.00
IUUC-Bgr-011980	Blumeria graminis	55.70	3.00e-157	546.00
IUUC-Bci-013599	Botrytis cinerea	63.96	0.00e+00	680.00
IUUC-Bdi-015021	Brachypodium distachyon	26.50	7.00e-31	126.00
IUUC-Bol-016495	Brassica oleracea	27.59	4.00e-29	121.00
IUUC-Bra-016960	Brassica rapa	25.85	3.00e-27	114.00
IUUC-Cin-025116	Ciona intestinalis	28.24	1.00e-32	132.00
IUUC-Cgl-026645	Colletotrichum gloeosporioides	82.36	0.00e+00	881.00
IUUC-Cne-027024	Cryptococcus neoformans	36.58	6.00e-88	317.00
IUUC-Cme-027303	Cyanidioschyzon merolae	23.33	5.00e-19	87.80
IUUC-Dor-031069	Dipodomys ordii	25.45	2.00e-19	88.60
IUUC-Dse-031403	Dothistroma septosporum	50.83	5.00e-154	536.00
IUUC-Dme-032125	Drosophila melanogaster	28.50	3.00e-34	137.00
IUUC-Ete-033027	Echinops telfairi	32.92	5.00e-33	133.00
IUUC-Eeu-035124	Erinaceus europaeus	26.91	5.00e-25	107.00
IUUC-Fox-037823	Fusarium oxysporum	68.03	0.00e+00	840.00
IUUC-Fso-038381	Fusarium solani	74.86	0.00e+00	842.00
IUUC-Ggr-039725	Gaeumannomyces graminis	69.68	0.00e+00	744.00
IUUC-Gma-043454	Glycine max	25.93	3.00e-26	111.00
IUUC-Hvu-047403	Hordeum vulgare	26.84	3.00e-25	107.00
IUUC-Kpa-049356	Komagataella pastoris	39.26	7.00e-109	386.00
IUUC-Lpe-051315	Leersia perrieri	27.82	7.00e-23	99.80
IUUC-Loc-052210	Lepisosteus oculatus	28.12	1.00e-35	142.00
IUUC-Lma-053046	Leptosphaeria maculans	59.31	8.00e-167	578.00
IUUC-Meu-056341	Macropus eugenii	27.48	5.00e-31	127.00
IUUC-Mor-057058	Magnaporthe oryzae	67.44	0.00e+00	721.00
IUUC-Mpo-057320	Magnaporthe poae	70.08	0.00e+00	749.00
IUUC-Mtr-058356	Medicago truncatula	27.51	8.00e-28	116.00
IUUC-Mla-058932	Melampsora laricipopulina	41.68	2.00e-103	368.00
IUUC-Mvi-060464	Microbotryum violaceum	40.68	1.00e-95	342.00
IUUC-Mac-064776	Musa acuminata	29.03	9.00e-32	129.00
IUUC-Nfi-068473	Neosartorya fischeri	56.40	6.00e-164	568.00
IUUC-Ncr-068681	Neurospora crassa	68.81	0.00e+00	721.00
IUUC-Opr-070457	Ochotona princeps	26.97	3.00e-31	127.00
IUUC-Oba-075119	Oryza barthii	28.05	2.00e-25	108.00
IUUC-Obr-076836	Oryza brachyantha	26.12	8.00e-27	113.00
IUUC-Ogl-077393	Oryza glaberrima	28.05	2.00e-25	108.00
IUUC-Ogu-078431	Oryza glumaepatula	26.12	2.00e-27	115.00
IUUC-Oin-079776	Oryza indica	28.21	4.00e-27	114.00
IUUC-Olo-080891	Oryza longistaminata	26.21	1.00e-25	109.00
IUUC-Ome-081750	Oryza meridionalis	28.21	9.00e-27	113.00
IUUC-Oni-082538	Oryza nivara	28.05	5.00e-26	110.00
IUUC-Opu-083682	Oryza punctata	26.54	1.00e-26	112.00
IUUC-Oru-084309	Oryza rufipogon	28.38	5.00e-26	110.00
IUUC-Osa-085423	Oryza sativa	28.21	1.00e-26	112.00
IUUC-Olu-087859	Ostreococcus lucimarinus	25.47	6.00e-07	47.00
IUUC-Pma-094114	Petromyzon marinus	28.15	4.00e-36	144.00
IUUC-Pno-095105	Phaeosphaeria nodorum	50.19	1.00e-141	494.00
IUUC-Ppa-096002	Physcomitrella patens	24.46	1.00e-18	86.70
IUUC-Pfo-097333	Poecilia formosa	30.08	9.00e-39	152.00
IUUC-Pop-099344	Populus trichocarpa	24.81	2.00e-17	82.00
IUUC-Ppe-101524	Prunus persica	25.95	7.00e-32	130.00
IUUC-Pgr-103540	Puccinia graminis	29.80	8.00e-62	230.00
IUUC-Pte-104086	Pyrenophora teres	59.34	5.00e-164	569.00
IUUC-Pyt-104451	Pyrenophora triticirepentis	59.75	6.00e-165	572.00
IUUC-Sce-106382	Saccharomyces cerevisiae	37.63	3.00e-95	341.00
IUUC-Sja-107860	Schizosaccharomyces japonicus	28.14	4.00e-48	184.00
IUUC-Spo-108376	Schizosaccharomyces pombe	30.43	3.00e-54	204.00
IUUC-Ssl-108476	Sclerotinia sclerotiorum	57.44	4.00e-118	416.00
IUUC-Smo-109364	Selaginella moellendorffii	27.08	4.00e-30	124.00
IUUC-Sit-110254	Setaria italica	27.53	1.00e-29	122.00
IUUC-Sly-111351	Solanum lycopersicum	29.32	3.00e-31	127.00
IUUC-Stu-112243	Solanum tuberosum	29.32	4.00e-31	127.00
IUUC-Sar-113053	Sorex araneus	28.12	7.00e-35	139.00
IUUC-Sbi-114065	Sorghum bicolor	27.27	1.00e-26	113.00
IUUC-Sre-115053	Sporisorium reilianum	34.63	7.00e-92	330.00
IUUC-Tsy-119203	Tarsius syrichta	30.59	5.00e-32	130.00
IUUC-Tca-121600	Theobroma cacao	27.82	1.00e-30	125.00
IUUC-Tre-122026	Trichoderma reesei	75.00	0.00e+00	817.00
IUUC-Tvi-122487	Trichoderma virens	73.79	0.00e+00	822.00
IUUC-Tae-123291	Triticum aestivum	27.85	2.00e-23	102.00
IUUC-Tur-126530	Triticum urartu	26.84	1.00e-21	95.90
IUUC-Tme-127056	Tuber melanosporum	53.78	4.00e-149	519.00
IUUC-Tbe-127372	Tupaia belangeri	26.97	2.00e-30	124.00
IUUC-Uma-129602	Ustilago maydis	37.28	8.00e-102	363.00
IUUC-Vvi-130903	Vitis vinifera	28.14	3.00e-31	127.00
IUUC-Xma-133204	Xiphophorus maculatus	30.08	9.00e-39	152.00
IUUC-Yli-134644	Yarrowia lipolytica	43.92	5.00e-121	426.00
IUUC-Zma-134868	Zea mays	26.06	7.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence