iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114779

UUCD1 version

UUC-SoB-00216

Ensembl Protein ID

Sb01g032050.1

UniProt Accession

A0A1B6QMF0; A0A1B6QMF0_SORBI

Genbank Protein ID

KXG39102.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G331600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g032050	Sb01g032050.1	Sb01g032050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-06	29.4	187	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl 50
            ++f C++ ++l  +Pv++p+G+++ rs++++ +++g+k cP++r+ l
   Q: 187  TDDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNK-CPMCRTVL 233
           589***********************************9.****9877 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTSPGGVFST ALVAEDFPWV EREEEMGMAP DTYSEVFGLA QRGTLAFRDR RFDEAISCYT 60
KAQNLRPDPI ILGNRSLAFC RLSQLLRERS AADSEYQPLN GLDPTTHAEL ALKDAEKILS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAATCCCA ACCCTACTCC CTCGCCTCCC GCCCCAATGA CGTCGCCGGG CGGCGTCTTC 60
TCCACCGCGC TCGTCGCCGA GGACTTCCCG TGGGTGCGTC GCTCGTGCCG GTCCAGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13181--TPR_8

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	28.16	5.00e-30	124.00
IUUC-Atr-002972	Amborella trichopoda	54.06	2.00e-122	431.00
IUUC-Apl-003355	Anas platyrhynchos	39.78	5.00e-32	131.00
IUUC-Aca-004822	Anolis carolinensis	28.71	1.00e-30	127.00
IUUC-Aly-005476	Arabidopsis lyrata	47.52	1.00e-112	399.00
IUUC-Ath-006654	Arabidopsis thaliana	47.52	2.00e-112	398.00
IUUC-Acl-008224	Aspergillus clavatus	34.17	4.00e-20	92.00
IUUC-Afu-008802	Aspergillus fumigatus	33.78	3.00e-20	92.80
IUUC-Ani-009473	Aspergillus nidulans	37.82	9.00e-22	97.80
IUUC-Ang-009643	Aspergillus niger	37.70	6.00e-21	94.70
IUUC-Ate-010489	Aspergillus terreus	35.90	3.00e-18	85.90
IUUC-Ame-010916	Astyanax mexicanus	42.42	1.00e-32	134.00
IUUC-Bta-012903	Bos taurus	28.57	6.00e-30	124.00
IUUC-Bdi-014333	Brachypodium distachyon	75.62	1.00e-170	591.00
IUUC-Bol-016150	Brassica oleracea	47.72	4.00e-110	390.00
IUUC-Bra-017878	Brassica rapa	48.78	2.00e-117	415.00
IUUC-Cel-018356	Caenorhabditis elegans	36.59	7.00e-12	62.40
IUUC-Cja-019312	Callithrix jacchus	28.16	5.00e-30	125.00
IUUC-Cfa-020159	Canis familiaris	28.16	1.00e-29	124.00
IUUC-Cpo-022528	Cavia porcellus	37.50	4.00e-29	122.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	30.77	2.00e-10	58.90
IUUC-Csa-023361	Chlorocebus sabaeus	27.18	4.00e-29	122.00
IUUC-Cho-024549	Choloepus hoffmanni	37.71	5.00e-29	121.00
IUUC-Cin-025668	Ciona intestinalis	37.70	2.00e-20	93.20
IUUC-Csv-026364	Ciona savignyi	33.15	9.00e-24	103.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	35.22	4.00e-21	95.50
IUUC-Cne-026875	Cryptococcus neoformans	33.33	3.00e-10	59.70
IUUC-Cme-027153	Cyanidioschyzon merolae	48.05	2.00e-21	96.30
IUUC-Dre-028195	Danio rerio	40.12	6.00e-31	128.00
IUUC-Dno-029284	Dasypus novemcinctus	28.57	4.00e-30	125.00
IUUC-Dor-031132	Dipodomys ordii	26.80	2.00e-26	113.00
IUUC-Dse-031331	Dothistroma septosporum	40.16	2.00e-18	85.90
IUUC-Dme-031919	Drosophila melanogaster	26.64	2.00e-14	73.90
IUUC-Ete-032455	Echinops telfairi	29.18	7.00e-31	127.00
IUUC-Eca-033248	Equus caballus	38.51	3.00e-28	118.00
IUUC-Eeu-034441	Erinaceus europaeus	27.83	1.00e-29	122.00
IUUC-Fca-035551	Felis catus	28.57	2.00e-29	122.00
IUUC-Fal-036731	Ficedula albicollis	31.03	1.00e-30	127.00
IUUC-Fso-038334	Fusarium solani	34.04	3.00e-21	95.90
IUUC-Gmo-038475	Gadus morhua	37.50	9.00e-30	123.00
IUUC-Gga-040888	Gallus gallus	28.34	3.00e-31	128.00
IUUC-Gac-041944	Gasterosteus aculeatus	41.21	4.00e-30	124.00
IUUC-Gma-042919	Glycine max	50.33	2.00e-121	427.00
IUUC-Ggo-044985	Gorilla gorilla	28.16	5.00e-30	125.00
IUUC-Hsa-046592	Homo sapiens	28.16	8.00e-30	124.00
IUUC-Hvu-047145	Hordeum vulgare	79.41	2.00e-144	503.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	28.57	2.00e-29	123.00
IUUC-Lch-049788	Latimeria chalumnae	28.29	2.00e-28	120.00
IUUC-Loc-052858	Lepisosteus oculatus	42.51	1.00e-32	133.00
IUUC-Lma-053145	Leptosphaeria maculans	36.97	1.00e-16	80.50
IUUC-Laf-053431	Loxodonta africana	29.05	1.00e-30	127.00
IUUC-Mcc-055751	Macaca mulatta	27.55	8.00e-29	121.00
IUUC-Meu-055901	Macropus eugenii	30.62	1.00e-17	84.00
IUUC-Mor-056963	Magnaporthe oryzae	30.06	4.00e-18	85.50
IUUC-Mtr-058075	Medicago truncatula	51.53	2.00e-124	438.00
IUUC-Mla-058946	Melampsora laricipopulina	23.91	2.00e-20	92.40
IUUC-Mga-059760	Meleagris gallopavo	39.23	1.00e-31	130.00
IUUC-Mvi-060228	Microbotryum violaceum	34.48	1.00e-22	101.00
IUUC-Mmr-061283	Microcebus murinus	28.16	7.00e-30	124.00
IUUC-Mdo-062203	Monodelphis domestica	38.12	5.00e-28	119.00
IUUC-Mmu-063169	Mus musculus	28.48	1.00e-29	124.00
IUUC-Mac-065566	Musa acuminata	58.00	8.00e-105	373.00
IUUC-Mpu-066537	Mustela putorius furo	36.93	1.00e-28	120.00
IUUC-Mlu-067497	Myotis lucifugus	28.57	8.00e-30	124.00
IUUC-Nfi-068337	Neosartorya fischeri	34.69	5.00e-22	98.60
IUUC-Nle-068971	Nomascus leucogenys	28.16	4.00e-30	125.00
IUUC-Opr-070791	Ochotona princeps	28.16	9.00e-30	124.00
IUUC-Ont-072148	Oreochromis niloticus	38.34	3.00e-31	129.00
IUUC-Oan-072747	Ornithorhynchus anatinus	30.56	1.00e-32	133.00
IUUC-Ocu-074928	Oryctolagus cuniculus	28.16	1.00e-29	123.00
IUUC-Oba-075239	Oryza barthii	75.05	0.00e+00	654.00
IUUC-Obr-076158	Oryza brachyantha	74.84	0.00e+00	650.00
IUUC-Ogu-078154	Oryza glumaepatula	73.02	5.00e-124	437.00
IUUC-Oin-079067	Oryza indica	72.05	1.00e-130	459.00
IUUC-Olo-080663	Oryza longistaminata	75.16	3.00e-178	616.00
IUUC-Oni-082119	Oryza nivara	74.64	0.00e+00	672.00
IUUC-Opu-083266	Oryza punctata	79.09	0.00e+00	630.00
IUUC-Oru-085190	Oryza rufipogon	70.16	0.00e+00	628.00
IUUC-Ola-087198	Oryzias latipes	41.14	1.00e-34	139.00
IUUC-Olu-087810	Ostreococcus lucimarinus	20.47	4.00e-06	46.20
IUUC-Oga-088719	Otolemur garnettii	28.16	9.00e-30	124.00
IUUC-Oar-089577	Ovis aries	28.57	4.00e-30	125.00
IUUC-Ptr-090711	Pan troglodytes	28.16	7.00e-30	125.00
IUUC-Pan-092587	Papio anubis	27.18	5.00e-29	122.00
IUUC-Psi-093128	Pelodiscus sinensis	27.24	5.00e-31	128.00
IUUC-Pma-094231	Petromyzon marinus	39.01	1.00e-29	122.00
IUUC-Pno-094889	Phaeosphaeria nodorum	29.90	3.00e-20	92.00
IUUC-Pfo-096795	Poecilia formosa	42.51	2.00e-33	135.00
IUUC-Pab-097800	Pongo abelii	28.12	9.00e-30	124.00
IUUC-Pop-100044	Populus trichocarpa	52.45	2.00e-136	478.00
IUUC-Pca-100905	Procavia capensis	38.69	2.00e-23	103.00
IUUC-Ppe-101621	Prunus persica	52.16	3.00e-118	417.00
IUUC-Pva-102242	Pteropus vampyrus	25.84	2.00e-21	97.10
IUUC-Pgr-103289	Puccinia graminis	32.76	2.00e-16	79.30
IUUC-Ptt-103898	Puccinia triticina	37.93	2.00e-18	86.30
IUUC-Pte-104214	Pyrenophora teres	34.45	1.00e-15	77.40
IUUC-Pyt-104565	Pyrenophora triticirepentis	34.45	9.00e-16	77.80
IUUC-Rno-105718	Rattus norvegicus	28.48	1.00e-29	124.00
IUUC-Sha-107565	Sarcophilus harrisii	36.02	3.00e-21	96.30
IUUC-Sja-107742	Schizosaccharomyces japonicus	33.69	5.00e-21	94.70
IUUC-Spo-108344	Schizosaccharomyces pombe	29.83	2.00e-15	76.60
IUUC-Sit-110495	Setaria italica	81.58	0.00e+00	658.00
IUUC-Sly-111396	Solanum lycopersicum	49.55	1.00e-120	426.00
IUUC-Sar-113220	Sorex araneus	29.86	1.00e-28	120.00
IUUC-Sre-114977	Sporisorium reilianum	63.41	9.00e-15	75.50
IUUC-Ssc-115733	Sus scrofa	28.91	6.00e-30	125.00
IUUC-Tgu-117431	Taeniopygia guttata	28.30	4.00e-31	128.00
IUUC-Tru-118274	Takifugu rubripes	40.70	1.00e-29	124.00
IUUC-Tsy-119043	Tarsius syrichta	27.83	1.00e-29	124.00
IUUC-Tni-119913	Tetraodon nigroviridis	37.42	9.00e-29	120.00
IUUC-Tca-121632	Theobroma cacao	49.17	5.00e-121	427.00
IUUC-Tre-121992	Trichoderma reesei	28.57	8.00e-09	53.90
IUUC-Tae-125900	Triticum aestivum	71.67	0.00e+00	663.00
IUUC-Tur-126297	Triticum urartu	82.37	2.00e-144	505.00
IUUC-Tme-127112	Tuber melanosporum	36.89	5.00e-18	84.70
IUUC-Tbe-127284	Tupaia belangeri	28.66	9.00e-31	126.00
IUUC-Ttr-128875	Tursiops truncatus	28.19	9.00e-24	104.00
IUUC-Uma-129541	Ustilago maydis	63.41	2.00e-14	74.30
IUUC-Vda-129721	Verticillium dahliae	30.92	2.00e-17	82.80
IUUC-Vpa-130408	Vicugna pacos	27.21	3.00e-28	119.00
IUUC-Vvi-130910	Vitis vinifera	52.87	5.00e-135	473.00
IUUC-Xtr-132417	Xenopus tropicalis	40.99	4.00e-30	125.00
IUUC-Xma-133579	Xiphophorus maculatus	41.92	5.00e-33	135.00
IUUC-Zma-135914	Zea mays	93.44	1.00e-165	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence