iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076716

Ensembl Protein ID

OB09G24500.1

UniProt Accession

J3MZM1; J3MZM1_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB09G24500	OB09G24500.1	OB09G24500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	2.00e-29	102.2	128	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqW 47
           k+LLdl c++V+dmikgktpe+iR+tFnienDftpeEe+++R+EnqW
   Q: 128  KGLLDLICQAVSDMIKGKTPEQIRETFNIENDFTPEEEEEIRRENQW 174
           89********************************************* PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MADAAVSKAK SITLRSCEGE VFEVAEIVAM ESQTIRHMIE DKCTDNGIPL PNVSANILCK 60
VIEYCNKHVE ARRGVAADGR ASGTAVEADT GLSKAIKEEL KTFDAEFVKV DQTTLFDLIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGACG CGGCTGTGTC GAAGGCGAAA TCAATCACCC TCCGTAGCTG CGAAGGTGAG 60
GTGTTTGAGG TGGCGGAGAT TGTGGCGATG GAGTCACAAA CCATTAGGCA CATGATTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

obr:102704733

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cme-027174	Cyanidioschyzon merolae	46.43	3.00e-34	136.00
IUUC-Oba-075368	Oryza barthii	76.57	5.00e-63	232.00
IUUC-Ogl-077679	Oryza glaberrima	76.27	6.00e-63	232.00
IUUC-Ogu-078125	Oryza glumaepatula	76.84	8.00e-64	234.00
IUUC-Oin-079779	Oryza indica	76.84	3.00e-63	233.00
IUUC-Ome-081330	Oryza meridionalis	76.27	5.00e-64	235.00
IUUC-Oni-082143	Oryza nivara	76.84	3.00e-63	233.00
IUUC-Opu-083714	Oryza punctata	69.49	1.00e-59	220.00
IUUC-Oru-085023	Oryza rufipogon	70.06	4.00e-56	209.00
IUUC-Osa-085416	Oryza sativa	76.84	3.00e-63	233.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence