iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107435

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01108893

Gene Name

WDR33

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000003914.1	ENSSHAT00000004497.1	ENSSHAP00000004451.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-30	101.9	203	233
UBD/Beta-Prp	9.00e-65	218.9	199	405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H++ ++  +f  +d+ ++++sdDgt+++WD+
   Q: 203  HKEAIREASFspTDNKFATCSDDGTVRIWDF 233
           999999999**555****************6 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlk 91
           ++++hk+ i+   fsp ++ +at s+dgt+++wd+ +    r l gh a v++v+++p++ + v+gs+D  + ik wd++tg+ + tl+
   Q: 199  MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDsqQPIKFWDPKTGQSLATLH 287
           6789999******************************9*9*****************************9999**************** PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           +h+++v+ ++++ +g++l+++s+d   +++d+++ ++  ++++gh++  + v++hp    l++sG+ D+ + +W +  +k +  ++ +h
   Q: 288  AHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHeGLFASGGSDGSLLFWHVGVEKEVGGMEMAH 376
           ************************************9999************************************************* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwd 208
           ++++ sl++++ g  l sgs+d t k+w 
   Q: 377  EGMIWSLAWHPLGHILCSGSNDHTSKFWT 405
           ****************************6 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MATEIGSPPR FFHMPRFQHQ APRQLFYKRP DFAQQQAMQQ LTFDGKRMRK AVNRKTIDYN 60
PSVIKYLEPK NRVWQRDQRD MRAIQPDAGY YNDLVPPIGM LNNPMNAVTT KFVRTSTNKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCCTAGAA GGAAAACATC ACCATGGCTA CAGAAATTGG GTCTCCACCT CGTTTTTTCC 60
ATATGCCACG GTTCCAGCAC CAGGCACCAA GGCAGCTCTT TTACAAACGA CCAGACTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR016133--Insect_antifreeze_prot
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0005654--C:nucleoplasm
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	49.52	1.00e-119	423.00
IUUC-Aml-001363	Ailuropoda melanoleuca	99.13	0.00e+00	1142.00
IUUC-Atr-003030	Amborella trichopoda	55.97	6.00e-133	468.00
IUUC-Apl-003409	Anas platyrhynchos	97.33	0.00e+00	1110.00
IUUC-Aca-004694	Anolis carolinensis	97.73	0.00e+00	1097.00
IUUC-Aly-006063	Arabidopsis lyrata	54.37	4.00e-133	468.00
IUUC-Ath-006583	Arabidopsis thaliana	50.69	7.00e-129	454.00
IUUC-Ago-007805	Ashbya gossypii	41.25	4.00e-80	291.00
IUUC-Acl-008075	Aspergillus clavatus	40.75	3.00e-92	332.00
IUUC-Afl-008582	Aspergillus flavus	41.82	7.00e-90	324.00
IUUC-Afu-008817	Aspergillus fumigatus	41.01	3.00e-79	289.00
IUUC-Ani-009391	Aspergillus nidulans	39.39	1.00e-83	303.00
IUUC-Ang-009750	Aspergillus niger	42.44	2.00e-75	275.00
IUUC-Aor-010085	Aspergillus oryzae	40.25	8.00e-92	331.00
IUUC-Ate-010397	Aspergillus terreus	40.50	2.00e-91	329.00
IUUC-Ame-010741	Astyanax mexicanus	85.54	4.00e-170	592.00
IUUC-Bgr-012169	Blumeria graminis	48.90	9.00e-98	350.00
IUUC-Bta-013265	Bos taurus	98.22	0.00e+00	1137.00
IUUC-Bci-013762	Botrytis cinerea	45.45	2.00e-101	363.00
IUUC-Bdi-014849	Brachypodium distachyon	55.44	1.00e-130	460.00
IUUC-Bol-015325	Brassica oleracea	54.13	2.00e-137	483.00
IUUC-Bra-017187	Brassica rapa	54.01	2.00e-137	482.00
IUUC-Cel-018378	Caenorhabditis elegans	50.51	3.00e-142	498.00
IUUC-Cja-019547	Callithrix jacchus	98.33	0.00e+00	1148.00
IUUC-Cfa-020031	Canis familiaris	99.13	0.00e+00	1138.00
IUUC-Cpo-021554	Cavia porcellus	98.10	0.00e+00	1027.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	41.98	6.00e-69	254.00
IUUC-Csa-023146	Chlorocebus sabaeus	98.61	0.00e+00	1134.00
IUUC-Cho-024679	Choloepus hoffmanni	88.85	0.00e+00	991.00
IUUC-Cin-025415	Ciona intestinalis	59.16	2.00e-168	586.00
IUUC-Csv-026003	Ciona savignyi	60.00	3.00e-172	597.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	46.85	4.00e-99	355.00
IUUC-Cne-026983	Cryptococcus neoformans	42.79	3.00e-95	342.00
IUUC-Cme-027147	Cyanidioschyzon merolae	50.62	3.00e-116	411.00
IUUC-Dre-028545	Danio rerio	90.56	0.00e+00	1078.00
IUUC-Dno-029677	Dasypus novemcinctus	98.78	0.00e+00	1136.00
IUUC-Dse-031371	Dothistroma septosporum	43.32	3.00e-86	312.00
IUUC-Dme-031663	Drosophila melanogaster	67.16	0.00e+00	678.00
IUUC-Ete-032511	Echinops telfairi	90.65	0.00e+00	1035.00
IUUC-Eca-034152	Equus caballus	99.13	0.00e+00	1139.00
IUUC-Eeu-034560	Erinaceus europaeus	85.60	3.00e-119	423.00
IUUC-Fca-035820	Felis catus	98.95	0.00e+00	1137.00
IUUC-Fox-037958	Fusarium oxysporum	45.90	4.00e-97	348.00
IUUC-Fso-038162	Fusarium solani	45.63	1.00e-95	343.00
IUUC-Gmo-039708	Gadus morhua	88.73	0.00e+00	1044.00
IUUC-Ggr-040031	Gaeumannomyces graminis	39.60	2.00e-83	302.00
IUUC-Gga-040963	Gallus gallus	97.32	0.00e+00	1113.00
IUUC-Gac-041541	Gasterosteus aculeatus	87.04	0.00e+00	1041.00
IUUC-Gma-044352	Glycine max	55.82	1.00e-131	463.00
IUUC-Ggo-045564	Gorilla gorilla	98.61	0.00e+00	1131.00
IUUC-Hsa-045833	Homo sapiens	98.95	0.00e+00	1136.00
IUUC-Hvu-047848	Hordeum vulgare	52.48	5.00e-92	331.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	99.13	0.00e+00	1137.00
IUUC-Kpa-049308	Komagataella pastoris	40.41	5.00e-82	298.00
IUUC-Lch-050525	Latimeria chalumnae	93.98	0.00e+00	1039.00
IUUC-Lpe-051364	Leersia perrieri	50.26	8.00e-115	407.00
IUUC-Loc-052696	Lepisosteus oculatus	92.32	0.00e+00	1046.00
IUUC-Lma-052951	Leptosphaeria maculans	47.70	5.00e-103	368.00
IUUC-Laf-053653	Loxodonta africana	99.13	0.00e+00	1135.00
IUUC-Mcc-055797	Macaca mulatta	98.95	0.00e+00	1136.00
IUUC-Meu-056331	Macropus eugenii	93.13	0.00e+00	707.00
IUUC-Mor-057168	Magnaporthe oryzae	41.06	6.00e-92	331.00
IUUC-Mpo-057510	Magnaporthe poae	46.49	4.00e-62	231.00
IUUC-Mtr-058032	Medicago truncatula	55.58	1.00e-130	460.00
IUUC-Mla-058852	Melampsora laricipopulina	47.21	1.00e-111	396.00
IUUC-Mga-059311	Meleagris gallopavo	96.99	0.00e+00	1108.00
IUUC-Mvi-060544	Microbotryum violaceum	50.79	5.00e-113	401.00
IUUC-Mmr-061143	Microcebus murinus	99.13	0.00e+00	1138.00
IUUC-Mdo-061977	Monodelphis domestica	99.48	0.00e+00	1139.00
IUUC-Mmu-063922	Mus musculus	98.33	0.00e+00	1147.00
IUUC-Mac-064961	Musa acuminata	57.55	4.00e-136	478.00
IUUC-Mpu-066079	Mustela putorius furo	99.58	0.00e+00	942.00
IUUC-Mlu-067247	Myotis lucifugus	99.13	0.00e+00	1142.00
IUUC-Nfi-068255	Neosartorya fischeri	41.94	3.00e-86	312.00
IUUC-Ncr-068909	Neurospora crassa	43.69	3.00e-98	352.00
IUUC-Nle-068994	Nomascus leucogenys	98.95	0.00e+00	1136.00
IUUC-Opr-071079	Ochotona princeps	96.76	0.00e+00	1104.00
IUUC-Ont-071971	Oreochromis niloticus	89.53	0.00e+00	1079.00
IUUC-Oan-073135	Ornithorhynchus anatinus	99.60	0.00e+00	979.00
IUUC-Ocu-073982	Oryctolagus cuniculus	98.95	0.00e+00	1137.00
IUUC-Oba-075297	Oryza barthii	51.46	1.00e-117	416.00
IUUC-Obr-076641	Oryza brachyantha	55.65	6.00e-129	454.00
IUUC-Ogl-077539	Oryza glaberrima	58.78	2.00e-94	339.00
IUUC-Ogu-078807	Oryza glumaepatula	51.46	2.00e-117	416.00
IUUC-Oin-079229	Oryza indica	55.70	1.00e-130	460.00
IUUC-Olo-080371	Oryza longistaminata	51.34	2.00e-115	409.00
IUUC-Ome-081149	Oryza meridionalis	51.46	4.00e-117	415.00
IUUC-Oni-082970	Oryza nivara	51.46	2.00e-117	416.00
IUUC-Opu-083415	Oryza punctata	50.93	4.00e-115	408.00
IUUC-Oru-085236	Oryza rufipogon	51.46	9.00e-118	417.00
IUUC-Ola-087421	Oryzias latipes	90.88	0.00e+00	1075.00
IUUC-Olu-087821	Ostreococcus lucimarinus	49.46	6.00e-102	363.00
IUUC-Oga-088132	Otolemur garnettii	99.13	0.00e+00	1137.00
IUUC-Oar-089513	Ovis aries	98.22	0.00e+00	1137.00
IUUC-Ptr-090717	Pan troglodytes	98.95	0.00e+00	1137.00
IUUC-Pan-092108	Papio anubis	98.95	0.00e+00	1136.00
IUUC-Psi-093892	Pelodiscus sinensis	98.94	0.00e+00	1117.00
IUUC-Pma-094561	Petromyzon marinus	80.35	0.00e+00	934.00
IUUC-Pno-094943	Phaeosphaeria nodorum	44.81	2.00e-102	365.00
IUUC-Ppa-095359	Physcomitrella patens	60.90	2.00e-142	499.00
IUUC-Pfo-096516	Poecilia formosa	90.55	0.00e+00	1040.00
IUUC-Pab-097759	Pongo abelii	98.95	0.00e+00	1136.00
IUUC-Pop-098892	Populus trichocarpa	56.61	2.00e-135	476.00
IUUC-Pca-100405	Procavia capensis	80.52	3.00e-102	367.00
IUUC-Ppe-101957	Prunus persica	54.92	6.00e-133	468.00
IUUC-Pva-102918	Pteropus vampyrus	99.13	0.00e+00	1139.00
IUUC-Pgr-103594	Puccinia graminis	50.53	1.00e-114	407.00
IUUC-Ptt-103879	Puccinia triticina	54.52	6.00e-101	361.00
IUUC-Pte-104419	Pyrenophora teres	45.45	4.00e-103	368.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	47.80	2.00e-102	366.00
IUUC-Rno-105838	Rattus norvegicus	97.62	0.00e+00	1159.00
IUUC-Sce-106331	Saccharomyces cerevisiae	40.71	4.00e-76	278.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	44.55	1.00e-98	353.00
IUUC-Spo-108163	Schizosaccharomyces pombe	44.31	1.00e-101	363.00
IUUC-Smo-109602	Selaginella moellendorffii	57.03	3.00e-133	468.00
IUUC-Sit-109729	Setaria italica	57.03	2.00e-132	466.00
IUUC-Sly-111679	Solanum lycopersicum	57.52	3.00e-136	479.00
IUUC-Sar-113157	Sorex araneus	99.13	0.00e+00	1142.00
IUUC-Sbi-114853	Sorghum bicolor	53.41	3.00e-131	462.00
IUUC-Sre-115085	Sporisorium reilianum	41.14	8.00e-101	360.00
IUUC-Ssc-116286	Sus scrofa	98.61	0.00e+00	1135.00
IUUC-Tgu-117219	Taeniopygia guttata	97.49	0.00e+00	1112.00
IUUC-Tru-117550	Takifugu rubripes	89.91	0.00e+00	1050.00
IUUC-Tsy-119294	Tarsius syrichta	99.13	0.00e+00	1140.00
IUUC-Tni-120561	Tetraodon nigroviridis	88.85	0.00e+00	1063.00
IUUC-Tca-121347	Theobroma cacao	55.82	3.00e-133	469.00
IUUC-Tre-122018	Trichoderma reesei	43.72	2.00e-97	349.00
IUUC-Tvi-122413	Trichoderma virens	43.72	2.00e-96	346.00
IUUC-Tae-123904	Triticum aestivum	51.67	1.00e-129	457.00
IUUC-Tme-127077	Tuber melanosporum	50.54	1.00e-105	377.00
IUUC-Tbe-127744	Tupaia belangeri	73.75	8.00e-159	554.00
IUUC-Ttr-128777	Tursiops truncatus	89.55	0.00e+00	1003.00
IUUC-Uma-129568	Ustilago maydis	39.36	2.00e-98	352.00
IUUC-Vda-129834	Verticillium dahliae	43.97	6.00e-95	341.00
IUUC-Vpa-130563	Vicugna pacos	84.04	2.00e-75	276.00
IUUC-Vvi-131360	Vitis vinifera	56.73	8.00e-135	474.00
IUUC-Xtr-132630	Xenopus tropicalis	89.08	0.00e+00	1038.00
IUUC-Xma-133665	Xiphophorus maculatus	91.07	0.00e+00	1051.00
IUUC-Yli-134556	Yarrowia lipolytica	37.11	6.00e-85	307.00
IUUC-Zma-135787	Zea mays	55.10	3.00e-133	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence