iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S90_225V6	PP1S90_225V6.3	PP1S90_225V6.3
PP1S90_225V6	PP1S90_225V6.4	PP1S90_225V6.4
PP1S90_225V6	PP1S90_225V6.2	PP1S90_225V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-08	33.9	226	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle   +g   ++lpC H+fha C+  w       +++++CP+C+
   Q: 226  CSVCLEQVVEGeiIRTLPCVHQFHAACIDLW------LRQQATCPVCK 267
           9*****995555599****************......**********7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSFVFRGARP DLEGGLAGLM PDRRYVSGHG FHGTVRHVNT NSMAFLISVA LLYMILSSEQ 60
MSLNLMIWVG MGVLFLASSL RMYSICHQLQ AQAQAAAAAA TAGGFLSHAE LRLRMHPTLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAAGAAGG TTGGGTTCGA AGTGGGAGGT TGTTGACGAG AGGGTGATTG ATCGATCCTC 60
GGTGGAATTG AGTCGTGAGA ATTCTGGAGG AGACGACACG GCTCATGACT TCGACCGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_186213

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025569	Ciona intestinalis	41.54	2.00e-12	67.00
IUUC-Cme-027166	Cyanidioschyzon merolae	50.85	1.00e-12	65.50
IUUC-Mor-056917	Magnaporthe oryzae	39.47	1.00e-12	67.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence