iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048298

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01043908

Gene Name

RNF20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000027656.1	ENSSTOT00000029313.1	ENSSTOP00000020788.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.50	5.00e-37	153.00	IUUC-Cel-018659
E3 activity/RING/RING	98.54	0.00e+00	1597.00	IUUC-Hsa-046462
E3 activity/RING/RING	43.08	2.00e-14	75.90	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MPPEKKAAVE DSGTTVETIK LGGVSSTEEL DIRTLQTKNR KLAEMLDQRQ AIEDELREHI 60
EKLERRQATD DASLLIVNRY WSQFDENIRI ILKRYDLEQG LGDLLTERKA LVVPEPEPDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCAGAGGT GAGGGATGGG CGGCCTGCGC GGGCCTAGGT GAATAACTGC CCCGAGGTGT 60
GTTCCCTGTG GCGCGAGGTT AAGATGCCAG CTTAGGTGTC TGCTGTGTGC CTTGGCGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0003730--F:mRNA 3'-UTR binding
GO:0003713--F:transcription coactivator activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0030336--P:negative regulation of cell migration
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination
GO:0031062--P:positive regulation of histone methylation
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000858	Aegilops tauschii	45.45	9.00e-10	56.60
IUUC-Aml-001976	Ailuropoda melanoleuca	98.23	0.00e+00	1635.00
IUUC-Apl-003407	Anas platyrhynchos	87.16	0.00e+00	914.00
IUUC-Aca-004246	Anolis carolinensis	87.68	0.00e+00	913.00
IUUC-Ago-007988	Ashbya gossypii	32.24	2.00e-15	77.40
IUUC-Acl-008319	Aspergillus clavatus	25.09	4.00e-14	73.20
IUUC-Aor-010142	Aspergillus oryzae	28.62	3.00e-15	77.00
IUUC-Ate-010547	Aspergillus terreus	26.15	3.00e-14	73.60
IUUC-Ame-011916	Astyanax mexicanus	78.21	4.00e-144	505.00
IUUC-Bgr-012245	Blumeria graminis	41.51	4.00e-10	59.70
IUUC-Bta-012357	Bos taurus	98.23	0.00e+00	1606.00
IUUC-Bdi-015006	Brachypodium distachyon	26.72	2.00e-24	107.00
IUUC-Bra-017335	Brassica rapa	30.69	1.00e-24	108.00
IUUC-Cel-018659	Caenorhabditis elegans	34.68	3.00e-40	160.00
IUUC-Cja-019244	Callithrix jacchus	98.08	0.00e+00	976.00
IUUC-Cfa-020320	Canis familiaris	98.33	0.00e+00	1622.00
IUUC-Cpo-021617	Cavia porcellus	95.31	0.00e+00	1648.00
IUUC-Csa-023509	Chlorocebus sabaeus	98.54	0.00e+00	1564.00
IUUC-Cho-024616	Choloepus hoffmanni	80.83	0.00e+00	980.00
IUUC-Cme-027134	Cyanidioschyzon merolae	39.06	1.00e-13	71.60
IUUC-Dno-029537	Dasypus novemcinctus	97.91	0.00e+00	990.00
IUUC-Dor-030250	Dipodomys ordii	95.62	0.00e+00	1522.00
IUUC-Dse-031300	Dothistroma septosporum	38.46	2.00e-15	77.80
IUUC-Ete-033164	Echinops telfairi	93.99	0.00e+00	1233.00
IUUC-Eca-033347	Equus caballus	98.02	0.00e+00	1593.00
IUUC-Eeu-034801	Erinaceus europaeus	93.83	0.00e+00	643.00
IUUC-Fca-036024	Felis catus	98.23	0.00e+00	1643.00
IUUC-Fal-037622	Ficedula albicollis	88.44	0.00e+00	925.00
IUUC-Gmo-039446	Gadus morhua	77.84	9.00e-133	467.00
IUUC-Ggr-040117	Gaeumannomyces graminis	45.28	2.00e-11	64.30
IUUC-Gga-040412	Gallus gallus	89.27	0.00e+00	892.00
IUUC-Ggo-044703	Gorilla gorilla	98.44	0.00e+00	1563.00
IUUC-Hsa-046462	Homo sapiens	98.54	0.00e+00	1564.00
IUUC-Lch-049505	Latimeria chalumnae	74.22	0.00e+00	681.00
IUUC-Loc-051951	Lepisosteus oculatus	63.73	2.00e-112	400.00
IUUC-Lma-053312	Leptosphaeria maculans	28.71	4.00e-15	76.60
IUUC-Laf-054122	Loxodonta africana	97.08	0.00e+00	1575.00
IUUC-Mcc-054647	Macaca mulatta	98.54	0.00e+00	1564.00
IUUC-Meu-056559	Macropus eugenii	91.88	0.00e+00	1434.00
IUUC-Mpo-057568	Magnaporthe poae	45.28	2.00e-11	64.30
IUUC-Mga-059731	Meleagris gallopavo	94.90	5.00e-173	601.00
IUUC-Mmr-061495	Microcebus murinus	98.54	0.00e+00	1639.00
IUUC-Mdo-062599	Monodelphis domestica	93.22	0.00e+00	943.00
IUUC-Mmu-063278	Mus musculus	97.60	0.00e+00	1580.00
IUUC-Mpu-065910	Mustela putorius furo	97.91	0.00e+00	1634.00
IUUC-Mlu-067040	Myotis lucifugus	97.08	0.00e+00	1558.00
IUUC-Ncr-068695	Neurospora crassa	27.31	3.00e-12	67.00
IUUC-Nle-069058	Nomascus leucogenys	98.85	0.00e+00	985.00
IUUC-Opr-071149	Ochotona princeps	97.91	0.00e+00	979.00
IUUC-Ont-072543	Oreochromis niloticus	75.28	7.00e-134	471.00
IUUC-Oan-072996	Ornithorhynchus anatinus	96.69	0.00e+00	644.00
IUUC-Ocu-074773	Oryctolagus cuniculus	98.64	0.00e+00	1566.00
IUUC-Ola-087287	Oryzias latipes	62.47	0.00e+00	892.00
IUUC-Olu-087683	Ostreococcus lucimarinus	36.36	8.00e-14	68.60
IUUC-Oga-088961	Otolemur garnettii	98.44	0.00e+00	1615.00
IUUC-Oar-089755	Ovis aries	97.91	0.00e+00	1584.00
IUUC-Ptr-091602	Pan troglodytes	98.54	0.00e+00	1564.00
IUUC-Pan-092263	Papio anubis	98.54	0.00e+00	1564.00
IUUC-Psi-093554	Pelodiscus sinensis	89.11	0.00e+00	926.00
IUUC-Pab-098598	Pongo abelii	98.33	0.00e+00	1561.00
IUUC-Pca-100157	Procavia capensis	96.04	0.00e+00	962.00
IUUC-Pva-102720	Pteropus vampyrus	97.81	0.00e+00	1570.00
IUUC-Rno-104996	Rattus norvegicus	97.03	0.00e+00	1002.00
IUUC-Sha-107000	Sarcophilus harrisii	94.49	0.00e+00	922.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	45.00	1.00e-12	68.20
IUUC-Spo-108304	Schizosaccharomyces pombe	43.08	5.00e-15	75.90
IUUC-Sar-113349	Sorex araneus	97.78	0.00e+00	924.00
IUUC-Ssc-115723	Sus scrofa	98.33	0.00e+00	1597.00
IUUC-Tgu-116549	Taeniopygia guttata	87.88	0.00e+00	884.00
IUUC-Tsy-118808	Tarsius syrichta	95.82	0.00e+00	1187.00
IUUC-Tni-120790	Tetraodon nigroviridis	61.55	0.00e+00	941.00
IUUC-Ttr-128266	Tursiops truncatus	97.81	0.00e+00	1589.00
IUUC-Vpa-130237	Vicugna pacos	98.23	0.00e+00	1638.00
IUUC-Xtr-132589	Xenopus tropicalis	73.91	0.00e+00	1209.00
IUUC-Zma-135805	Zea mays	27.42	2.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence