iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012353

Ensembl Protein ID

ENSBTAP00000040137.3

UniProt Accession

G3X7P1; G3X7P1_BOVIN

Genbank Protein ID

ENSBTAP00000040137

Protein Name

General transcription factor IIH subunit 2

Genbank Nucleotide ID

DAAA02050051

Gene Name

GTF2H2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000027983.3	ENSBTAT00000040362.3	ENSBTAP00000040137.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	39.64	4.00e-75	276.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Bos taurus

Protein Sequence
(Fasta)

MDEEPERTKR WEGGYERTWE ILKEDESGSL KATIEDILFK AKRKRVFEHH GQVRLGMMRH 60
LYVVVDGSRT MEDQDLKPNR LTCTLKLLEY FVEEYFDQNP ISQIGIIVTK SKRAEKLTEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCTCGGC AGGACAGGTA AGTCAGTGGT AGAGGATTTC CCGGAGCCGC GGCGGACGAC 60
CGCCGCCTAG GAAGCAAGGC GGCGGGAGGG GCCTTCGCGG CTGGGAGCGG AGGCTGAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	35.14	2.00e-47	183.00
IUUC-Aml-002041	Ailuropoda melanoleuca	96.96	0.00e+00	756.00
IUUC-Atr-003056	Amborella trichopoda	44.41	1.00e-73	270.00
IUUC-Apl-003464	Anas platyrhynchos	88.17	0.00e+00	635.00
IUUC-Aca-004745	Anolis carolinensis	88.24	0.00e+00	672.00
IUUC-Aly-005559	Arabidopsis lyrata	40.97	2.00e-81	295.00
IUUC-Ath-007556	Arabidopsis thaliana	40.97	3.00e-81	295.00
IUUC-Ago-007851	Ashbya gossypii	39.13	2.00e-81	296.00
IUUC-Acl-008100	Aspergillus clavatus	39.81	6.00e-81	294.00
IUUC-Afl-008649	Aspergillus flavus	40.91	7.00e-12	61.20
IUUC-Afu-009066	Aspergillus fumigatus	38.76	3.00e-82	298.00
IUUC-Ani-009372	Aspergillus nidulans	39.47	2.00e-79	289.00
IUUC-Ang-009726	Aspergillus niger	39.13	2.00e-84	305.00
IUUC-Aor-010135	Aspergillus oryzae	39.41	9.00e-81	293.00
IUUC-Ate-010399	Aspergillus terreus	37.66	2.00e-24	105.00
IUUC-Ame-011618	Astyanax mexicanus	82.22	0.00e+00	688.00
IUUC-Bgr-012154	Blumeria graminis	37.53	6.00e-79	288.00
IUUC-Bci-013932	Botrytis cinerea	38.85	2.00e-82	299.00
IUUC-Bdi-014391	Brachypodium distachyon	39.70	2.00e-77	283.00
IUUC-Bol-015128	Brassica oleracea	41.41	2.00e-82	299.00
IUUC-Bra-017932	Brassica rapa	41.40	2.00e-82	299.00
IUUC-Cel-018649	Caenorhabditis elegans	42.16	5.00e-87	314.00
IUUC-Cja-018776	Callithrix jacchus	96.71	0.00e+00	752.00
IUUC-Cfa-020584	Canis familiaris	97.72	0.00e+00	759.00
IUUC-Cpo-021300	Cavia porcellus	96.20	0.00e+00	753.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	41.42	1.00e-73	270.00
IUUC-Csa-024092	Chlorocebus sabaeus	96.96	0.00e+00	756.00
IUUC-Cho-024919	Choloepus hoffmanni	89.09	9.00e-105	372.00
IUUC-Cin-025386	Ciona intestinalis	54.29	3.00e-113	401.00
IUUC-Csv-026295	Ciona savignyi	50.62	1.00e-106	379.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	34.68	8.00e-70	257.00
IUUC-Cne-026956	Cryptococcus neoformans	34.15	2.00e-77	283.00
IUUC-Cme-027150	Cyanidioschyzon merolae	31.61	5.00e-47	182.00
IUUC-Dre-027962	Danio rerio	82.17	0.00e+00	692.00
IUUC-Dno-029979	Dasypus novemcinctus	95.52	0.00e+00	642.00
IUUC-Dse-031405	Dothistroma septosporum	36.19	8.00e-68	251.00
IUUC-Dme-031710	Drosophila melanogaster	50.24	4.00e-113	401.00
IUUC-Ete-032631	Echinops telfairi	90.23	0.00e+00	700.00
IUUC-Eca-034054	Equus caballus	95.38	0.00e+00	747.00
IUUC-Fca-035724	Felis catus	92.41	0.00e+00	729.00
IUUC-Fal-036987	Ficedula albicollis	88.46	0.00e+00	741.00
IUUC-Fox-037692	Fusarium oxysporum	36.65	2.00e-73	269.00
IUUC-Fso-038442	Fusarium solani	38.29	7.00e-74	271.00
IUUC-Gmo-039273	Gadus morhua	77.24	0.00e+00	659.00
IUUC-Ggr-040009	Gaeumannomyces graminis	35.20	8.00e-58	218.00
IUUC-Gga-041089	Gallus gallus	87.69	0.00e+00	734.00
IUUC-Gac-041978	Gasterosteus aculeatus	77.84	0.00e+00	627.00
IUUC-Gma-043371	Glycine max	41.98	1.00e-89	323.00
IUUC-Hsa-046001	Homo sapiens	96.71	0.00e+00	754.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	96.46	0.00e+00	777.00
IUUC-Kpa-049235	Komagataella pastoris	40.84	3.00e-76	278.00
IUUC-Lch-049926	Latimeria chalumnae	85.13	0.00e+00	690.00
IUUC-Lpe-051352	Leersia perrieri	40.00	7.00e-75	274.00
IUUC-Loc-051987	Lepisosteus oculatus	84.24	0.00e+00	703.00
IUUC-Lma-053171	Leptosphaeria maculans	32.83	4.00e-60	225.00
IUUC-Laf-054372	Loxodonta africana	97.69	0.00e+00	775.00
IUUC-Mcc-055108	Macaca mulatta	97.22	0.00e+00	757.00
IUUC-Mor-056990	Magnaporthe oryzae	34.76	2.00e-72	266.00
IUUC-Mtr-058401	Medicago truncatula	40.95	9.00e-88	317.00
IUUC-Mla-059186	Melampsora laricipopulina	40.54	2.00e-86	312.00
IUUC-Mvi-060262	Microbotryum violaceum	38.37	8.00e-85	307.00
IUUC-Mmr-061688	Microcebus murinus	88.64	0.00e+00	688.00
IUUC-Mdo-062154	Monodelphis domestica	92.91	0.00e+00	754.00
IUUC-Mmu-064232	Mus musculus	95.70	0.00e+00	741.00
IUUC-Mac-065091	Musa acuminata	41.83	2.00e-81	295.00
IUUC-Mpu-066747	Mustela putorius furo	90.38	0.00e+00	687.00
IUUC-Mlu-067799	Myotis lucifugus	87.88	0.00e+00	668.00
IUUC-Nfi-068371	Neosartorya fischeri	32.69	4.00e-18	83.60
IUUC-Ncr-068704	Neurospora crassa	38.58	9.00e-72	264.00
IUUC-Nle-069054	Nomascus leucogenys	96.96	0.00e+00	754.00
IUUC-Ont-071624	Oreochromis niloticus	78.09	0.00e+00	641.00
IUUC-Oan-072898	Ornithorhynchus anatinus	92.15	0.00e+00	740.00
IUUC-Ocu-074289	Oryctolagus cuniculus	98.06	8.00e-178	615.00
IUUC-Oba-075985	Oryza barthii	39.49	8.00e-74	270.00
IUUC-Obr-076887	Oryza brachyantha	40.36	3.00e-77	281.00
IUUC-Ogl-077823	Oryza glaberrima	39.49	8.00e-74	270.00
IUUC-Ogu-078412	Oryza glumaepatula	41.14	2.00e-67	249.00
IUUC-Oin-079569	Oryza indica	36.62	9.00e-50	191.00
IUUC-Olo-080249	Oryza longistaminata	36.75	9.00e-49	187.00
IUUC-Ome-081240	Oryza meridionalis	41.14	4.00e-67	248.00
IUUC-Oni-082152	Oryza nivara	41.14	3.00e-67	249.00
IUUC-Opu-084011	Oryza punctata	39.24	2.00e-73	269.00
IUUC-Oru-084719	Oryza rufipogon	40.40	2.00e-68	253.00
IUUC-Osa-085286	Oryza sativa	39.75	5.00e-75	275.00
IUUC-Ola-086525	Oryzias latipes	67.61	4.00e-152	530.00
IUUC-Olu-087876	Ostreococcus lucimarinus	41.75	1.00e-69	257.00
IUUC-Oga-088125	Otolemur garnettii	95.95	0.00e+00	765.00
IUUC-Oar-089701	Ovis aries	98.73	0.00e+00	787.00
IUUC-Ptr-091218	Pan troglodytes	96.96	0.00e+00	756.00
IUUC-Pan-091755	Papio anubis	97.22	0.00e+00	757.00
IUUC-Psi-094061	Pelodiscus sinensis	92.56	0.00e+00	748.00
IUUC-Pma-094430	Petromyzon marinus	77.47	1.00e-120	425.00
IUUC-Pno-094900	Phaeosphaeria nodorum	31.05	4.00e-25	109.00
IUUC-Ppa-095895	Physcomitrella patens	42.04	6.00e-85	307.00
IUUC-Pfo-096297	Poecilia formosa	80.24	7.00e-125	439.00
IUUC-Pab-097717	Pongo abelii	97.22	0.00e+00	757.00
IUUC-Pop-098938	Populus trichocarpa	41.86	4.00e-84	305.00
IUUC-Pca-100389	Procavia capensis	86.57	1.00e-172	598.00
IUUC-Ppe-102045	Prunus persica	41.28	1.00e-81	296.00
IUUC-Pva-102357	Pteropus vampyrus	93.75	4.00e-102	363.00
IUUC-Pgr-103399	Puccinia graminis	42.40	3.00e-92	332.00
IUUC-Ptt-103872	Puccinia triticina	43.14	4.00e-92	331.00
IUUC-Pte-104092	Pyrenophora teres	32.97	2.00e-52	200.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	33.51	6.00e-53	201.00
IUUC-Rno-105515	Rattus norvegicus	95.20	0.00e+00	763.00
IUUC-Sce-106434	Saccharomyces cerevisiae	39.59	1.00e-82	300.00
IUUC-Sha-106808	Sarcophilus harrisii	93.67	0.00e+00	758.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	42.60	3.00e-81	295.00
IUUC-Spo-108044	Schizosaccharomyces pombe	40.56	1.00e-82	300.00
IUUC-Smo-109581	Selaginella moellendorffii	42.03	3.00e-84	305.00
IUUC-Sit-110704	Setaria italica	39.65	8.00e-78	284.00
IUUC-Sly-110990	Solanum lycopersicum	44.48	4.00e-71	261.00
IUUC-Stu-112542	Solanum tuberosum	42.01	5.00e-46	177.00
IUUC-Sar-113766	Sorex araneus	96.28	8.00e-179	619.00
IUUC-Sbi-114016	Sorghum bicolor	40.46	2.00e-76	279.00
IUUC-Sre-115099	Sporisorium reilianum	38.65	3.00e-82	299.00
IUUC-Ssc-115277	Sus scrofa	97.22	0.00e+00	741.00
IUUC-Tgu-117343	Taeniopygia guttata	87.92	0.00e+00	735.00
IUUC-Tru-118397	Takifugu rubripes	76.80	4.00e-179	620.00
IUUC-Tni-120272	Tetraodon nigroviridis	75.38	3.00e-176	610.00
IUUC-Tca-121514	Theobroma cacao	42.89	3.00e-91	328.00
IUUC-Tre-121990	Trichoderma reesei	37.23	6.00e-71	261.00
IUUC-Tvi-122504	Trichoderma virens	38.63	8.00e-71	260.00
IUUC-Tae-123153	Triticum aestivum	39.59	1.00e-76	280.00
IUUC-Tur-126693	Triticum urartu	43.30	4.00e-62	231.00
IUUC-Tme-127011	Tuber melanosporum	38.93	2.00e-78	286.00
IUUC-Tbe-127939	Tupaia belangeri	97.22	0.00e+00	754.00
IUUC-Ttr-128889	Tursiops truncatus	88.35	0.00e+00	696.00
IUUC-Uma-129450	Ustilago maydis	37.89	3.00e-81	296.00
IUUC-Vda-129919	Verticillium dahliae	37.38	2.00e-67	249.00
IUUC-Vpa-130419	Vicugna pacos	32.73	6.40e-02	32.00
IUUC-Vvi-130928	Vitis vinifera	43.40	2.00e-86	312.00
IUUC-Xtr-131891	Xenopus tropicalis	72.22	8.00e-175	606.00
IUUC-Xma-133260	Xiphophorus maculatus	79.45	1.00e-123	435.00
IUUC-Yli-134578	Yarrowia lipolytica	37.53	9.00e-76	277.00
IUUC-Zma-135427	Zea mays	40.56	3.00e-77	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence