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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105925
UUCD1 version UUC-RaN-00759
Ensembl Protein ID ENSRNOP00000011579.1
UniProt Accession P24392; Q63733; PEX2_RAT
Genbank Protein ID CAA41054.1; BAA06306.1; BAA06307.1; AAH63169.1
Protein Name Peroxisome biogenesis factor 2; Peroxin-2; Peroxisomal membrane protein 3; Peroxisome assembly factor 1
Genbank Nucleotide ID X57988; D30616; D30617; BC063169
Gene Name Pex2; Paf1; Pmp35; Pxmp3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000008748.4 ENSRNOT00000011579.2 ENSRNOP00000011579.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 29.37 1.00e-33 140.00 IUUC-Ath-006880
E3 activity/RING/RING 87.87 5.00e-162 567.00 IUUC-Hsa-046307
E3 activity/RING/RING 93.44 2.00e-170 595.00 IUUC-Mmu-063391
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Functional Description
(View)

Functional Description


     Belongs to the pex2/pex10/pex12 family.
 Belongs to the pex2/pex10/pex12 family.
Protein Sequence
(Fasta)
MAAREESTQS ANRVLRISQL DALELNKALE QLVWSQFTQC FHGFKPGLLA RFEPEVKAFL 60
WLFLWRFTIY SKNATVGQSV LNIQYKNDSS PNPVYQPPSK NQKLLYAVCT IGGRWLEERC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105925|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCCATCGTCC CTTCGGTTCC TCGGCTCCTC GGCTCCTCGG CATTTTCCGC CGTTGGGCCG 60
TATGCAGCTT TCCTCTAAAC CACTGACTGT AATTTCCCAG GTTTCTTTCA GCCACTTCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105925|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0576--Peroxisome
KW-0962--Peroxisome biogenesis
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR006845--Pex_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF04757--Pex2_Pex12
PF00097--zf-C3HC4
SMART

SM00184--RING
Gene Ontology

GO:0016593--C:Cdc73/Paf1 complex
GO:0005779--C:integral component of peroxisomal membrane
GO:0016020--C:membrane
GO:0005778--C:peroxisomal membrane
GO:0005777--C:peroxisome
GO:0008270--F:zinc ion binding
GO:0006635--P:fatty acid beta-oxidation
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0048147--P:negative regulation of fibroblast proliferation
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0031648--P:protein destabilization
GO:0016558--P:protein import into peroxisome matrix
GO:0000038--P:very long-chain fatty acid metabolic process
KEGG rno:29534
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000106 Aegilops tauschii 29.62 2.00e-22 99.80
IUUC-Aml-001595 Ailuropoda melanoleuca 87.54 1.00e-158 551.00
IUUC-Atr-002766 Amborella trichopoda 29.83 8.00e-34 137.00
IUUC-Apl-004019 Anas platyrhynchos 73.36 1.00e-134 472.00
IUUC-Aca-004791 Anolis carolinensis 71.19 1.00e-118 419.00
IUUC-Aly-005607 Arabidopsis lyrata 29.67 5.00e-36 144.00
IUUC-Ath-006880 Arabidopsis thaliana 29.37 8.00e-35 140.00
IUUC-Ago-007841 Ashbya gossypii 25.00 2.00e-09 55.80
IUUC-Acl-008272 Aspergillus clavatus 31.60 3.00e-27 116.00
IUUC-Afl-008698 Aspergillus flavus 31.28 5.00e-27 115.00
IUUC-Afu-008859 Aspergillus fumigatus 32.23 2.00e-27 117.00
IUUC-Ani-009210 Aspergillus nidulans 32.04 1.00e-26 114.00
IUUC-Ang-009515 Aspergillus niger 30.88 5.00e-26 112.00
IUUC-Aor-009913 Aspergillus oryzae 31.28 5.00e-27 115.00
IUUC-Ate-010581 Aspergillus terreus 31.07 7.00e-27 115.00
IUUC-Ame-010951 Astyanax mexicanus 55.48 2.00e-90 325.00
IUUC-Bgr-012274 Blumeria graminis 27.03 1.00e-23 104.00
IUUC-Bta-012949 Bos taurus 86.51 2.00e-155 541.00
IUUC-Bci-013654 Botrytis cinerea 30.58 2.00e-19 90.10
IUUC-Bdi-014062 Brachypodium distachyon 32.78 1.00e-38 153.00
IUUC-Bra-016860 Brassica rapa 29.47 4.00e-34 138.00
IUUC-Cel-018250 Caenorhabditis elegans 25.35 2.00e-19 89.40
IUUC-Cja-019623 Callithrix jacchus 86.89 3.00e-162 563.00
IUUC-Cfa-020899 Canis familiaris 87.54 2.00e-162 564.00
IUUC-Cpo-021971 Cavia porcellus 88.85 1.00e-163 568.00
IUUC-Cre-022853 Chlamydomonas reinhardtii 36.07 7.00e-05 41.20
IUUC-Csa-023552 Chlorocebus sabaeus 89.18 3.00e-166 577.00
IUUC-Cho-024309 Choloepus hoffmanni 88.52 2.00e-165 574.00
IUUC-Csv-025909 Ciona savignyi 29.05 4.00e-27 115.00
IUUC-Cgl-026469 Colletotrichum gloeosporioides 26.90 3.00e-24 106.00
IUUC-Cne-027011 Cryptococcus neoformans 25.79 2.00e-16 80.10
IUUC-Cme-027206 Cyanidioschyzon merolae 28.32 1.00e-18 87.00
IUUC-Dre-027627 Danio rerio 59.15 3.00e-97 347.00
IUUC-Dno-029220 Dasypus novemcinctus 89.51 1.00e-166 578.00
IUUC-Dor-030828 Dipodomys ordii 89.51 2.00e-166 577.00
IUUC-Dse-031469 Dothistroma septosporum 30.69 2.00e-16 80.90
IUUC-Dme-031865 Drosophila melanogaster 29.23 7.00e-36 144.00
IUUC-Ete-033020 Echinops telfairi 67.21 7.00e-104 370.00
IUUC-Eca-034078 Equus caballus 88.20 8.00e-165 572.00
IUUC-Fca-036406 Felis catus 87.87 2.00e-162 564.00
IUUC-Fal-037365 Ficedula albicollis 71.71 2.00e-123 434.00
IUUC-Fox-037825 Fusarium oxysporum 32.14 5.00e-21 95.50
IUUC-Fso-038458 Fusarium solani 33.33 5.00e-22 98.60
IUUC-Gmo-038729 Gadus morhua 57.14 4.00e-26 111.00
IUUC-Ggr-039992 Gaeumannomyces graminis 30.64 2.00e-15 77.40
IUUC-Gga-040364 Gallus gallus 73.68 7.00e-136 476.00
IUUC-Gac-041501 Gasterosteus aculeatus 48.84 3.00e-70 258.00
IUUC-Gma-044174 Glycine max 30.67 9.00e-34 137.00
IUUC-Ggo-045248 Gorilla gorilla 87.87 4.00e-164 570.00
IUUC-Hsa-046307 Homo sapiens 87.87 2.00e-163 567.00
IUUC-Hvu-047618 Hordeum vulgare 33.11 6.00e-38 150.00
IUUC-Itr-048006 Ictidomys tridecemlineatus 88.16 2.00e-163 567.00
IUUC-Kpa-049382 Komagataella pastoris 25.16 2.00e-13 70.10
IUUC-Lch-049694 Latimeria chalumnae 69.61 5.00e-120 423.00
IUUC-Lpe-050779 Leersia perrieri 31.93 7.00e-31 127.00
IUUC-Loc-052253 Lepisosteus oculatus 56.48 3.00e-99 354.00
IUUC-Lma-053100 Leptosphaeria maculans 33.33 4.00e-14 72.80
IUUC-Laf-053543 Loxodonta africana 87.21 5.00e-162 563.00
IUUC-Mcc-055435 Macaca mulatta 88.85 4.00e-165 573.00
IUUC-Meu-056096 Macropus eugenii 83.55 4.00e-154 536.00
IUUC-Mor-057285 Magnaporthe oryzae 30.84 3.00e-24 106.00
IUUC-Mtr-058501 Medicago truncatula 30.87 3.00e-29 122.00
IUUC-Mla-059178 Melampsora laricipopulina 24.89 3.00e-14 72.80
IUUC-Mga-060125 Meleagris gallopavo 72.70 3.00e-135 474.00
IUUC-Mvi-060252 Microbotryum violaceum 28.16 1.00e-20 94.40
IUUC-Mmr-061696 Microcebus murinus 88.52 2.00e-163 568.00
IUUC-Mdo-062789 Monodelphis domestica 83.22 7.00e-154 536.00
IUUC-Mmu-063391 Mus musculus 93.44 9.00e-172 595.00
IUUC-Mac-064555 Musa acuminata 32.88 2.00e-37 149.00
IUUC-Mpu-065832 Mustela putorius furo 87.21 1.00e-162 565.00
IUUC-Mlu-067811 Myotis lucifugus 85.57 1.00e-159 555.00
IUUC-Nfi-068362 Neosartorya fischeri 32.56 9.00e-23 101.00
IUUC-Ncr-068621 Neurospora crassa 27.45 3.00e-22 100.00
IUUC-Nle-069980 Nomascus leucogenys 88.20 4.00e-164 570.00
IUUC-Opr-070196 Ochotona princeps 88.85 5.00e-164 570.00
IUUC-Ont-071826 Oreochromis niloticus 52.90 4.00e-79 287.00
IUUC-Oan-072999 Ornithorhynchus anatinus 56.98 5.00e-26 109.00
IUUC-Ocu-074466 Oryctolagus cuniculus 89.18 7.00e-164 569.00
IUUC-Oba-075893 Oryza barthii 32.60 5.00e-31 128.00
IUUC-Obr-076621 Oryza brachyantha 32.21 7.00e-38 150.00
IUUC-Ogl-077881 Oryza glaberrima 32.11 6.00e-37 147.00
IUUC-Ogu-078407 Oryza glumaepatula 32.43 3.00e-37 149.00
IUUC-Oin-080063 Oryza indica 32.11 5.00e-37 148.00
IUUC-Olo-080529 Oryza longistaminata 32.52 7.00e-27 114.00
IUUC-Ome-081350 Oryza meridionalis 32.60 7.00e-31 127.00
IUUC-Oni-082647 Oryza nivara 32.52 7.00e-27 114.00
IUUC-Opu-083358 Oryza punctata 32.25 2.00e-30 126.00
IUUC-Oru-084263 Oryza rufipogon 30.68 1.00e-27 116.00
IUUC-Osa-085561 Oryza sativa 32.11 5.00e-37 148.00
IUUC-Ola-087048 Oryzias latipes 48.69 7.00e-68 250.00
IUUC-Olu-087782 Ostreococcus lucimarinus 29.80 6.00e-16 77.80
IUUC-Oga-088107 Otolemur garnettii 87.87 2.00e-162 565.00
IUUC-Oar-089967 Ovis aries 86.18 1.00e-154 538.00
IUUC-Ptr-091627 Pan troglodytes 87.87 5.00e-164 569.00
IUUC-Pan-091754 Papio anubis 88.52 4.00e-165 573.00
IUUC-Psi-093286 Pelodiscus sinensis 72.46 3.00e-127 447.00
IUUC-Pma-094543 Petromyzon marinus 45.99 3.00e-65 241.00
IUUC-Pno-094850 Phaeosphaeria nodorum 31.10 2.00e-18 87.00
IUUC-Ppa-095816 Physcomitrella patens 30.98 5.00e-32 131.00
IUUC-Pfo-097377 Poecilia formosa 50.17 1.00e-77 283.00
IUUC-Pab-097671 Pongo abelii 88.52 4.00e-164 570.00
IUUC-Pop-099692 Populus trichocarpa 32.20 4.00e-36 145.00
IUUC-Ppe-101194 Prunus persica 30.07 4.00e-29 122.00
IUUC-Pva-102697 Pteropus vampyrus 85.25 3.00e-157 547.00
IUUC-Pgr-103472 Puccinia graminis 50.00 1.00e-06 47.40
IUUC-Pte-104058 Pyrenophora teres 27.83 8.00e-25 108.00
IUUC-Pyt-104435 Pyrenophora triticirepentis 29.13 7.00e-22 98.60
IUUC-Sce-106321 Saccharomyces cerevisiae 22.26 4.00e-08 52.00
IUUC-Sha-106928 Sarcophilus harrisii 83.55 1.00e-153 535.00
IUUC-Sja-107666 Schizosaccharomyces japonicus 26.09 3.00e-04 38.50
IUUC-Ssl-108434 Sclerotinia sclerotiorum 27.10 8.00e-19 88.60
IUUC-Smo-109238 Selaginella moellendorffii 27.69 2.00e-30 126.00
IUUC-Sit-110018 Setaria italica 31.63 2.00e-36 146.00
IUUC-Sly-111670 Solanum lycopersicum 32.09 5.00e-37 148.00
IUUC-Stu-112190 Solanum tuberosum 31.54 1.00e-36 147.00
IUUC-Sar-112920 Sorex araneus 80.53 6.00e-150 523.00
IUUC-Sbi-114300 Sorghum bicolor 31.85 2.00e-37 149.00
IUUC-Sre-115019 Sporisorium reilianum 27.59 4.00e-12 66.20
IUUC-Ssc-116289 Sus scrofa 83.61 9.00e-152 529.00
IUUC-Tgu-116936 Taeniopygia guttata 72.04 4.00e-133 467.00
IUUC-Tru-118611 Takifugu rubripes 47.49 2.00e-80 292.00
IUUC-Tsy-119073 Tarsius syrichta 86.89 4.00e-162 563.00
IUUC-Tni-119824 Tetraodon nigroviridis 46.54 3.00e-71 261.00
IUUC-Tca-121117 Theobroma cacao 31.13 6.00e-35 141.00
IUUC-Tre-122081 Trichoderma reesei 26.19 2.00e-26 113.00
IUUC-Tvi-122454 Trichoderma virens 26.98 5.00e-28 118.00
IUUC-Tae-123108 Triticum aestivum 33.11 6.00e-38 150.00
IUUC-Tur-125989 Triticum urartu 32.35 2.00e-22 98.60
IUUC-Tme-127082 Tuber melanosporum 29.29 1.00e-25 111.00
IUUC-Tbe-127229 Tupaia belangeri 88.85 9.00e-164 568.00
IUUC-Ttr-129251 Tursiops truncatus 85.90 5.00e-160 556.00
IUUC-Vda-130008 Verticillium dahliae 33.73 1.00e-15 77.80
IUUC-Vpa-130084 Vicugna pacos 85.90 8.00e-152 529.00
IUUC-Vvi-130953 Vitis vinifera 31.06 5.00e-36 144.00
IUUC-Xtr-132429 Xenopus tropicalis 66.67 5.00e-123 433.00
IUUC-Xma-133897 Xiphophorus maculatus 50.99 8.00e-74 270.00
IUUC-Yli-134504 Yarrowia lipolytica 27.85 1.00e-16 80.50
IUUC-Zma-135123 Zea mays 30.06 5.00e-35 141.00
Created Date 25-Jun-2017

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