iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130946

UUCD1 version

UUC-ViV-01131

Ensembl Protein ID

VIT_18s0001g07370.t01

UniProt Accession

A5B0M8; A5B0M8_VITVI

Genbank Protein ID

CAN74012.1; CCB45644.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM442522; FN595227

Gene Name

UBP16; VIT_18s0001g07370; VITISV_003549

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g07370	VIT_18s0001g07370.t01	VIT_18s0001g07370.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.10e-76	257.9	661	965

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgy 87
           +Gl N gN+CY N+vLQcL+++p+l++++l+  +++     +  +++ ++++++++l+ +  k+ ++  sp  +l++++++ +++ + 
   Q: 661  CGLMNCGNSCYANAVLQCLAFTPPLTSYFLQgLHSK-----SCLKKEWCFTCEFESLILKA-KEGNSPLSPLGILSQIRNIGSHLGNG 742
           7******************************44444.....4466789**********988.99999********************* PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           +++Da+Efl++ +d++++ +         +e           + +   ++++sli  +F+g l+s+ikc +c+ +s+r+e ++dl+++
   Q: 743  KEEDAHEFLRYAIDAMQSVC--------LKEA--------GVNASGSLEEETSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVE 814
           ********************........2222........334677889999************************************ PP
   S: 176  vpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           ++g+      +l+++L++ft++e l+genky+c++ck++ +a+kkl++++ P++L++ LkRf   ++ ++  k+nk++ fp+ Ldl+p
   Q: 815  IEGDIG----TLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRF---QS-GKFGKLNKSIRFPEILDLAP 894
           *****5....8***************************************************...33.4557**************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           f++ +++k   + +Y+L+avvvH      + sGHYv+yvkn ++kW+++dDs+V++v+ e+vl+   + aY+l+Y r
   Q: 895  FMSGTSDK---SPIYRLYAVVVHLDimnAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLT---KGAYMLLYAR 965
           ****6655...79**********873325569********************************...********87 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MLVPGDLGFS CLALLSLFFP VIGLVIRHKW RVAVARKEEI KRLLILASEE AARAELETAA 60
VSVSPQFQCA VCYCPTTTRC ARCKAVRYCS GKCQIIHWRQ GHKEECNPPS ITHQIIDESI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGTTC CTGGGGATCT TGGGTTTTCG TGCCTGGCCC TGCTGTCGTT GTTTTTCCCC 60
GTAATCGGAT TGGTTATCCG GCACAAATGG CGGGTAGCCG TTGCGAGGAA GGAGGAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008283--P:cell proliferation
GO:0009908--P:flower development
GO:0048366--P:leaf development
GO:0016579--P:protein deubiquitination
GO:1901000--P:regulation of response to salt stress
GO:0009651--P:response to salt stress
GO:0048364--P:root development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100257420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	63.85	3.00e-148	518.00
IUUC-Atr-002920	Amborella trichopoda	71.07	2.00e-174	605.00
IUUC-Aly-005811	Arabidopsis lyrata	67.83	4.00e-153	534.00
IUUC-Ath-006972	Arabidopsis thaliana	67.56	5.00e-152	531.00
IUUC-Bdi-014317	Brachypodium distachyon	64.47	1.00e-151	530.00
IUUC-Bol-015264	Brassica oleracea	54.91	3.00e-156	545.00
IUUC-Bra-018079	Brassica rapa	67.38	2.00e-153	535.00
IUUC-Cne-027049	Cryptococcus neoformans	33.33	1.00e-35	143.00
IUUC-Gma-043905	Glycine max	50.70	0.00e+00	822.00
IUUC-Hvu-047748	Hordeum vulgare	61.69	7.00e-147	514.00
IUUC-Lpe-051561	Leersia perrieri	60.00	4.00e-146	511.00
IUUC-Mtr-058629	Medicago truncatula	46.79	0.00e+00	790.00
IUUC-Mac-065141	Musa acuminata	51.82	4.00e-167	581.00
IUUC-Oba-075163	Oryza barthii	62.06	6.00e-147	514.00
IUUC-Obr-076357	Oryza brachyantha	69.08	1.00e-149	523.00
IUUC-Ogl-077565	Oryza glaberrima	62.06	7.00e-147	514.00
IUUC-Ogu-078443	Oryza glumaepatula	62.06	5.00e-147	514.00
IUUC-Oin-079111	Oryza indica	69.36	9.00e-149	520.00
IUUC-Olo-080489	Oryza longistaminata	64.52	1.00e-143	502.00
IUUC-Ome-081510	Oryza meridionalis	66.85	4.00e-146	511.00
IUUC-Oni-082570	Oryza nivara	62.06	7.00e-147	514.00
IUUC-Opu-084076	Oryza punctata	57.17	9.00e-148	516.00
IUUC-Oru-084237	Oryza rufipogon	62.06	8.00e-147	513.00
IUUC-Osa-085297	Oryza sativa	62.06	8.00e-147	513.00
IUUC-Pop-099860	Populus trichocarpa	53.86	0.00e+00	957.00
IUUC-Ppe-101801	Prunus persica	52.01	0.00e+00	962.00
IUUC-Sit-110237	Setaria italica	61.07	7.00e-148	517.00
IUUC-Sly-111806	Solanum lycopersicum	72.95	5.00e-179	620.00
IUUC-Sbi-114259	Sorghum bicolor	59.76	2.00e-145	509.00
IUUC-Tca-121756	Theobroma cacao	54.02	0.00e+00	1001.00
IUUC-Tae-125414	Triticum aestivum	63.95	1.00e-149	523.00
IUUC-Tur-126736	Triticum urartu	64.12	2.00e-149	522.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence