iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022645

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING finger protein

Genbank Nucleotide ID

DS496116

Gene Name

CHLREDRAFT_205532

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_205532	EDP06227	EDP06227

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-07	29.1	85	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle  k+ p++l C+H  +++Cl  +    ++   + +CP Cr
   Q: 85   CQVCLEYVKR-PISLACQHSLCLECLRGV---RRMDTAQRNCPSCR 126
           99********.***************666...66699999*****8 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MKPDTNQDGN AEKDKRARIQ EVQARTDISD AEKARLVQQI MTEGCQWQQE VDEDERDKIY 60
QAGIAAFAPH KNDKEREDLR SSITCQVCLE YVKRPISLAC QHSLCLECLR GVRRMDTAQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAACCAG ACACCAATCA AGACGGAAAT GCGGAGAAGG ACAAACGTGC CAGGATTCAG 60
GAAGTTCAGG CGCGCACCGA CATTTCCGAC GCCGAGAAGG CGCGCCTGGT CCAGCAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing

KEGG

cre:CHLREDRAFT_205532

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	41.00	6.00e-65	239.00
IUUC-Aml-001285	Ailuropoda melanoleuca	33.66	5.00e-20	91.30
IUUC-Atr-002603	Amborella trichopoda	37.50	1.00e-84	305.00
IUUC-Apl-003819	Anas platyrhynchos	28.73	9.00e-24	103.00
IUUC-Aca-005287	Anolis carolinensis	33.33	2.00e-21	95.90
IUUC-Aly-006276	Arabidopsis lyrata	38.85	1.00e-80	292.00
IUUC-Ath-007096	Arabidopsis thaliana	35.24	2.00e-76	278.00
IUUC-Ame-011845	Astyanax mexicanus	35.61	2.00e-21	95.90
IUUC-Bta-012600	Bos taurus	33.66	1.00e-20	93.20
IUUC-Bdi-014586	Brachypodium distachyon	36.54	2.00e-67	249.00
IUUC-Bol-016567	Brassica oleracea	36.29	2.00e-80	291.00
IUUC-Bra-017880	Brassica rapa	36.11	1.00e-81	295.00
IUUC-Cja-018864	Callithrix jacchus	33.66	1.00e-20	93.20
IUUC-Cfa-020558	Canis familiaris	33.66	7.00e-20	90.90
IUUC-Cpo-022125	Cavia porcellus	33.66	3.00e-21	95.10
IUUC-Csa-023951	Chlorocebus sabaeus	33.33	1.00e-18	86.70
IUUC-Cho-024949	Choloepus hoffmanni	34.94	8.00e-08	50.10
IUUC-Cin-025454	Ciona intestinalis	33.17	1.00e-21	96.30
IUUC-Csv-026112	Ciona savignyi	44.44	3.00e-08	52.40
IUUC-Cne-026942	Cryptococcus neoformans	32.72	4.00e-13	65.90
IUUC-Dre-028200	Danio rerio	35.61	2.00e-21	95.90
IUUC-Dno-029523	Dasypus novemcinctus	33.69	7.00e-20	90.90
IUUC-Dor-031084	Dipodomys ordii	33.99	3.00e-20	92.00
IUUC-Ete-032718	Echinops telfairi	35.59	6.00e-08	49.30
IUUC-Eca-033266	Equus caballus	33.99	5.00e-20	91.30
IUUC-Eeu-035077	Erinaceus europaeus	31.82	1.00e-10	59.30
IUUC-Fca-035685	Felis catus	33.69	6.00e-20	90.90
IUUC-Fal-037082	Ficedula albicollis	35.85	1.00e-21	96.30
IUUC-Gmo-038826	Gadus morhua	35.07	2.00e-20	92.40
IUUC-Ggr-039874	Gaeumannomyces graminis	26.01	4.00e-04	37.70
IUUC-Gga-041062	Gallus gallus	35.85	1.00e-21	96.70
IUUC-Gac-042196	Gasterosteus aculeatus	37.56	1.00e-24	106.00
IUUC-Gma-044194	Glycine max	39.41	7.00e-82	296.00
IUUC-Ggo-045414	Gorilla gorilla	33.66	1.00e-20	93.60
IUUC-Hsa-046236	Homo sapiens	33.66	1.00e-20	93.60
IUUC-Hvu-047471	Hordeum vulgare	39.78	3.00e-79	287.00
IUUC-Itr-047867	Ictidomys tridecemlineatus	33.33	2.00e-20	92.40
IUUC-Lch-050162	Latimeria chalumnae	34.63	1.00e-20	93.60
IUUC-Lpe-050756	Leersia perrieri	39.36	7.00e-82	296.00
IUUC-Loc-051806	Lepisosteus oculatus	35.47	1.00e-21	96.70
IUUC-Laf-053671	Loxodonta africana	33.66	4.00e-20	91.70
IUUC-Mcc-055513	Macaca mulatta	33.66	8.00e-21	94.00
IUUC-Mtr-058805	Medicago truncatula	36.26	3.00e-79	288.00
IUUC-Mla-058836	Melampsora laricipopulina	34.39	8.00e-17	80.10
IUUC-Mga-059759	Meleagris gallopavo	35.14	3.00e-21	95.10
IUUC-Mvi-060378	Microbotryum violaceum	35.67	3.00e-18	84.30
IUUC-Mmr-060646	Microcebus murinus	33.33	1.00e-18	86.70
IUUC-Mdo-061911	Monodelphis domestica	34.98	2.00e-21	95.90
IUUC-Mmu-063738	Mus musculus	34.39	1.00e-20	93.60
IUUC-Mac-064697	Musa acuminata	38.25	6.00e-81	293.00
IUUC-Mpu-065696	Mustela putorius furo	33.66	7.00e-20	90.90
IUUC-Mlu-067538	Myotis lucifugus	31.16	4.00e-20	91.70
IUUC-Nle-069901	Nomascus leucogenys	33.33	1.00e-18	86.30
IUUC-Ont-072292	Oreochromis niloticus	37.44	1.00e-23	103.00
IUUC-Oan-073109	Ornithorhynchus anatinus	35.38	1.00e-20	92.80
IUUC-Ocu-074748	Oryctolagus cuniculus	32.86	3.00e-18	85.10
IUUC-Oba-075108	Oryza barthii	36.08	2.00e-81	295.00
IUUC-Obr-076572	Oryza brachyantha	37.72	1.00e-79	289.00
IUUC-Ogl-077177	Oryza glaberrima	36.33	2.00e-80	291.00
IUUC-Ogu-078298	Oryza glumaepatula	36.33	1.00e-80	292.00
IUUC-Oin-079911	Oryza indica	35.91	3.00e-81	294.00
IUUC-Olo-080527	Oryza longistaminata	35.58	4.00e-75	274.00
IUUC-Ome-081137	Oryza meridionalis	34.04	6.00e-68	250.00
IUUC-Oni-082510	Oryza nivara	38.08	1.00e-86	312.00
IUUC-Opu-083974	Oryza punctata	35.57	3.00e-81	294.00
IUUC-Oru-084985	Oryza rufipogon	38.27	2.00e-87	314.00
IUUC-Osa-085339	Oryza sativa	36.51	4.00e-81	294.00
IUUC-Ola-086416	Oryzias latipes	38.05	1.00e-24	106.00
IUUC-Olu-087771	Ostreococcus lucimarinus	38.46	3.00e-06	44.70
IUUC-Oga-088221	Otolemur garnettii	33.66	2.00e-20	92.80
IUUC-Oar-090189	Ovis aries	33.80	9.00e-19	87.00
IUUC-Ptr-090559	Pan troglodytes	33.66	1.00e-20	93.60
IUUC-Pan-092855	Papio anubis	33.69	6.00e-21	94.40
IUUC-Psi-093033	Pelodiscus sinensis	35.85	2.00e-21	96.30
IUUC-Pma-094339	Petromyzon marinus	36.36	3.00e-22	98.60
IUUC-Ppa-095940	Physcomitrella patens	33.83	2.00e-86	311.00
IUUC-Pfo-096243	Poecilia formosa	37.44	5.00e-23	101.00
IUUC-Pab-098243	Pongo abelii	33.66	1.00e-20	93.60
IUUC-Pop-099561	Populus trichocarpa	36.50	6.00e-86	310.00
IUUC-Pca-100503	Procavia capensis	33.66	2.00e-20	92.40
IUUC-Ppe-101961	Prunus persica	35.25	6.00e-78	283.00
IUUC-Pva-102266	Pteropus vampyrus	33.33	1.00e-18	86.70
IUUC-Pgr-103644	Puccinia graminis	35.37	4.00e-16	77.80
IUUC-Ptt-103867	Puccinia triticina	36.31	2.00e-19	89.00
IUUC-Rno-105345	Rattus norvegicus	34.39	2.00e-20	92.80
IUUC-Sha-106618	Sarcophilus harrisii	31.13	3.00e-21	95.50
IUUC-Smo-109319	Selaginella moellendorffii	35.26	1.00e-81	295.00
IUUC-Sit-110588	Setaria italica	37.97	6.00e-81	293.00
IUUC-Sly-111415	Solanum lycopersicum	33.92	8.00e-82	296.00
IUUC-Stu-112842	Solanum tuberosum	33.97	3.00e-81	294.00
IUUC-Sar-113546	Sorex araneus	39.64	4.00e-14	71.60
IUUC-Sbi-114726	Sorghum bicolor	37.21	9.00e-80	289.00
IUUC-Sre-115182	Sporisorium reilianum	30.86	3.00e-13	67.80
IUUC-Ssc-116081	Sus scrofa	33.66	5.00e-20	91.30
IUUC-Tgu-116945	Taeniopygia guttata	35.85	6.00e-22	97.40
IUUC-Tru-117599	Takifugu rubripes	37.07	2.00e-23	102.00
IUUC-Tsy-119249	Tarsius syrichta	33.33	2.00e-18	86.30
IUUC-Tni-119843	Tetraodon nigroviridis	31.56	3.00e-25	108.00
IUUC-Tca-121785	Theobroma cacao	36.96	3.00e-81	294.00
IUUC-Tae-123299	Triticum aestivum	38.66	1.00e-71	263.00
IUUC-Tme-127149	Tuber melanosporum	32.99	4.00e-17	80.90
IUUC-Tbe-127823	Tupaia belangeri	33.02	5.00e-17	81.30
IUUC-Ttr-128215	Tursiops truncatus	33.33	1.00e-18	86.70
IUUC-Vpa-130073	Vicugna pacos	33.33	1.00e-18	87.00
IUUC-Vvi-131413	Vitis vinifera	38.36	4.00e-87	314.00
IUUC-Xtr-132432	Xenopus tropicalis	36.59	4.00e-22	98.20
IUUC-Xma-133516	Xiphophorus maculatus	37.44	1.00e-23	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence