iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006288

UUCD1 version

UUC-ArL-00882

Ensembl Protein ID

Al_scaffold_0001_3299

UniProt Accession

D7KHJ4; D7KHJ4_ARALL

Genbank Protein ID

EFH69978.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348713

Gene Name

NHL8; ARALYDRAFT_680976

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0001_3299	Al_scaffold_0001_3299	Al_scaffold_0001_3299

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RBR	30.80	4.00e-52	204.00	IUUC-Hsa-046887

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRRTHGGSGR NHDRRYIRRD AGIVNPINDH TQSEDTTSTD SSSAAFPSTS QPFQNLDHPT 60
KPSKSHRNRR SRGSNSKPRP VEKSEVNFAE SDAVDCLADE LSSLKVKQSS NSIMEEKFHH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACGAA CCCACGGAGG CAGTGGAAGA AATCACGACC GCCGCTACAT CCGCCGCGAC 60
GCTGGGATTG TGAATCCAAT TAACGATCAT ACACAATCGG AAGACACGAC TTCCACTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50908--RWD
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF05773--RWD

SMART

SM00647--IBR
SM00184--RING
SM00591--RWD

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_680976

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001130	Aegilops tauschii	51.23	1.00e-157	549.00
IUUC-Aml-001458	Ailuropoda melanoleuca	31.47	4.00e-53	201.00
IUUC-Atr-002560	Amborella trichopoda	56.97	2.00e-171	595.00
IUUC-Apl-003680	Anas platyrhynchos	30.70	4.00e-60	224.00
IUUC-Aca-005000	Anolis carolinensis	30.61	2.00e-54	205.00
IUUC-Ath-006719	Arabidopsis thaliana	92.01	0.00e+00	1254.00
IUUC-Acl-008213	Aspergillus clavatus	21.36	4.00e-22	99.00
IUUC-Afl-008433	Aspergillus flavus	23.34	4.00e-23	102.00
IUUC-Afu-008772	Aspergillus fumigatus	22.52	7.00e-21	95.10
IUUC-Ani-009249	Aspergillus nidulans	22.12	7.00e-18	85.10
IUUC-Ang-009757	Aspergillus niger	26.27	1.00e-24	107.00
IUUC-Aor-009963	Aspergillus oryzae	23.65	2.00e-22	100.00
IUUC-Ate-010460	Aspergillus terreus	23.00	2.00e-19	90.10
IUUC-Ame-011312	Astyanax mexicanus	31.43	3.00e-55	208.00
IUUC-Bgr-012052	Blumeria graminis	22.90	4.00e-24	105.00
IUUC-Bta-013529	Bos taurus	31.39	7.00e-55	207.00
IUUC-Bci-013729	Botrytis cinerea	21.70	7.00e-19	88.20
IUUC-Bdi-014940	Brachypodium distachyon	53.89	2.00e-161	562.00
IUUC-Bra-016998	Brassica rapa	79.64	0.00e+00	1066.00
IUUC-Cel-018547	Caenorhabditis elegans	28.73	5.00e-34	138.00
IUUC-Cja-019791	Callithrix jacchus	31.39	1.00e-54	206.00
IUUC-Cfa-020403	Canis familiaris	31.39	1.00e-54	206.00
IUUC-Cpo-022229	Cavia porcellus	30.80	1.00e-48	186.00
IUUC-Cre-022601	Chlamydomonas reinhardtii	39.71	3.00e-38	150.00
IUUC-Csa-024115	Chlorocebus sabaeus	31.17	3.00e-54	205.00
IUUC-Cho-024911	Choloepus hoffmanni	31.39	5.00e-55	207.00
IUUC-Cin-025578	Ciona intestinalis	30.75	3.00e-49	188.00
IUUC-Csv-026355	Ciona savignyi	27.45	5.00e-43	167.00
IUUC-Cgl-026439	Colletotrichum gloeosporioides	22.17	6.00e-23	101.00
IUUC-Cne-026782	Cryptococcus neoformans	23.81	9.00e-22	97.80
IUUC-Dre-027380	Danio rerio	29.37	3.00e-55	208.00
IUUC-Dno-029640	Dasypus novemcinctus	31.10	8.00e-55	207.00
IUUC-Dor-030681	Dipodomys ordii	31.39	2.00e-54	206.00
IUUC-Dse-031208	Dothistroma septosporum	22.76	5.00e-23	102.00
IUUC-Ete-033122	Echinops telfairi	28.64	4.00e-44	171.00
IUUC-Eca-033755	Equus caballus	31.39	1.00e-53	203.00
IUUC-Fca-036461	Felis catus	31.39	2.00e-54	205.00
IUUC-Fal-037516	Ficedula albicollis	31.58	5.00e-60	224.00
IUUC-Fox-037923	Fusarium oxysporum	21.90	2.00e-05	44.30
IUUC-Fso-038307	Fusarium solani	21.38	1.00e-21	97.40
IUUC-Gmo-039563	Gadus morhua	29.73	5.00e-52	197.00
IUUC-Ggr-039920	Gaeumannomyces graminis	20.75	2.00e-11	63.90
IUUC-Gga-040331	Gallus gallus	31.11	5.00e-60	224.00
IUUC-Gac-042164	Gasterosteus aculeatus	30.80	2.00e-54	206.00
IUUC-Gma-044080	Glycine max	57.82	0.00e+00	697.00
IUUC-Ggo-045257	Gorilla gorilla	30.94	9.00e-54	203.00
IUUC-Hsa-046887	Homo sapiens	30.94	7.00e-54	204.00
IUUC-Hvu-047317	Hordeum vulgare	47.47	7.00e-135	473.00
IUUC-Itr-048199	Ictidomys tridecemlineatus	31.39	2.00e-54	206.00
IUUC-Lch-050155	Latimeria chalumnae	29.56	6.00e-56	211.00
IUUC-Lpe-051669	Leersia perrieri	55.43	1.00e-149	522.00
IUUC-Loc-051779	Lepisosteus oculatus	28.97	2.00e-52	199.00
IUUC-Lma-052969	Leptosphaeria maculans	21.84	1.00e-21	97.10
IUUC-Laf-053488	Loxodonta africana	30.94	6.00e-60	224.00
IUUC-Mcc-054701	Macaca mulatta	31.17	3.00e-54	205.00
IUUC-Meu-056577	Macropus eugenii	25.55	1.00e-21	97.10
IUUC-Mor-057157	Magnaporthe oryzae	21.77	1.00e-20	94.00
IUUC-Mpo-057518	Magnaporthe poae	20.72	2.00e-17	84.00
IUUC-Mtr-058125	Medicago truncatula	58.38	0.00e+00	647.00
IUUC-Mla-059062	Melampsora laricipopulina	26.34	9.00e-17	80.50
IUUC-Mga-059906	Meleagris gallopavo	31.33	5.00e-60	224.00
IUUC-Mvi-060374	Microbotryum violaceum	25.90	2.00e-18	86.30
IUUC-Mmr-061786	Microcebus murinus	31.39	2.00e-54	206.00
IUUC-Mdo-062453	Monodelphis domestica	30.75	2.00e-59	222.00
IUUC-Mmu-063521	Mus musculus	30.94	3.00e-50	192.00
IUUC-Mac-065119	Musa acuminata	58.73	0.00e+00	636.00
IUUC-Mpu-066274	Mustela putorius furo	31.39	2.00e-54	205.00
IUUC-Mlu-067202	Myotis lucifugus	31.39	2.00e-52	199.00
IUUC-Nfi-068564	Neosartorya fischeri	22.52	4.00e-21	95.90
IUUC-Ncr-068823	Neurospora crassa	22.75	1.00e-22	101.00
IUUC-Nle-068987	Nomascus leucogenys	30.94	1.00e-53	203.00
IUUC-Opr-070453	Ochotona princeps	31.17	7.00e-55	207.00
IUUC-Ont-072611	Oreochromis niloticus	29.80	9.00e-52	197.00
IUUC-Oan-073738	Ornithorhynchus anatinus	29.73	2.00e-57	216.00
IUUC-Ocu-074396	Oryctolagus cuniculus	30.94	4.00e-53	201.00
IUUC-Oba-075472	Oryza barthii	54.97	2.00e-155	541.00
IUUC-Obr-076277	Oryza brachyantha	55.17	3.00e-160	557.00
IUUC-Ogl-077046	Oryza glaberrima	53.93	1.00e-152	532.00
IUUC-Ogu-078634	Oryza glumaepatula	55.17	5.00e-156	543.00
IUUC-Oin-080080	Oryza indica	49.52	1.00e-148	519.00
IUUC-Olo-080828	Oryza longistaminata	47.40	6.00e-136	478.00
IUUC-Ome-081387	Oryza meridionalis	48.65	4.00e-149	520.00
IUUC-Oni-082934	Oryza nivara	54.26	4.00e-150	524.00
IUUC-Opu-083719	Oryza punctata	47.79	5.00e-128	450.00
IUUC-Oru-084518	Oryza rufipogon	55.17	5.00e-156	543.00
IUUC-Ola-087312	Oryzias latipes	28.73	2.00e-50	192.00
IUUC-Olu-087661	Ostreococcus lucimarinus	32.58	1.00e-77	283.00
IUUC-Oga-089129	Otolemur garnettii	31.17	7.00e-54	204.00
IUUC-Oar-089839	Ovis aries	31.39	8.00e-55	207.00
IUUC-Ptr-091626	Pan troglodytes	30.94	9.00e-54	203.00
IUUC-Pan-092798	Papio anubis	31.17	3.00e-54	205.00
IUUC-Psi-093253	Pelodiscus sinensis	30.26	2.00e-57	216.00
IUUC-Pma-094512	Petromyzon marinus	30.92	1.00e-60	226.00
IUUC-Pno-094937	Phaeosphaeria nodorum	23.78	5.00e-25	108.00
IUUC-Ppa-095211	Physcomitrella patens	41.39	9.00e-127	446.00
IUUC-Pfo-097049	Poecilia formosa	28.51	9.00e-45	173.00
IUUC-Pab-097911	Pongo abelii	30.94	6.00e-54	204.00
IUUC-Pop-099841	Populus trichocarpa	62.66	0.00e+00	735.00
IUUC-Pca-100814	Procavia capensis	27.83	1.00e-34	140.00
IUUC-Ppe-101972	Prunus persica	68.76	0.00e+00	749.00
IUUC-Pva-103038	Pteropus vampyrus	31.39	4.00e-54	204.00
IUUC-Pgr-103277	Puccinia graminis	27.25	1.00e-29	123.00
IUUC-Ptt-103855	Puccinia triticina	26.08	8.00e-30	124.00
IUUC-Pte-104113	Pyrenophora teres	21.61	3.00e-20	92.40
IUUC-Pyt-104619	Pyrenophora triticirepentis	22.94	1.00e-21	97.40
IUUC-Rno-106003	Rattus norvegicus	30.71	3.00e-50	191.00
IUUC-Sce-106287	Saccharomyces cerevisiae	26.55	2.00e-21	96.30
IUUC-Sha-106652	Sarcophilus harrisii	30.75	6.00e-60	224.00
IUUC-Spo-108167	Schizosaccharomyces pombe	25.46	5.00e-28	117.00
IUUC-Smo-109393	Selaginella moellendorffii	40.68	3.00e-109	387.00
IUUC-Sit-110529	Setaria italica	51.88	5.00e-139	487.00
IUUC-Sly-111829	Solanum lycopersicum	64.03	0.00e+00	732.00
IUUC-Stu-112811	Solanum tuberosum	64.77	0.00e+00	738.00
IUUC-Sar-113259	Sorex araneus	29.60	5.00e-25	108.00
IUUC-Sbi-114591	Sorghum bicolor	53.71	2.00e-148	518.00
IUUC-Sre-115227	Sporisorium reilianum	24.65	1.00e-22	101.00
IUUC-Ssc-115293	Sus scrofa	31.17	2.00e-53	202.00
IUUC-Tgu-117335	Taeniopygia guttata	31.80	8.00e-60	223.00
IUUC-Tru-118458	Takifugu rubripes	30.67	1.00e-55	209.00
IUUC-Tsy-119475	Tarsius syrichta	30.32	3.00e-44	171.00
IUUC-Tni-119827	Tetraodon nigroviridis	29.35	4.00e-53	201.00
IUUC-Tca-121023	Theobroma cacao	61.17	0.00e+00	781.00
IUUC-Tre-121965	Trichoderma reesei	23.28	3.00e-26	112.00
IUUC-Tvi-122564	Trichoderma virens	22.00	3.00e-24	106.00
IUUC-Tae-124793	Triticum aestivum	53.19	2.00e-145	508.00
IUUC-Tur-126258	Triticum urartu	43.60	2.00e-115	409.00
IUUC-Tbe-127227	Tupaia belangeri	32.33	2.00e-13	69.30
IUUC-Ttr-128984	Tursiops truncatus	26.97	2.00e-35	142.00
IUUC-Uma-129565	Ustilago maydis	24.59	1.00e-18	87.80
IUUC-Vpa-130301	Vicugna pacos	31.39	2.00e-54	206.00
IUUC-Vvi-131244	Vitis vinifera	63.16	0.00e+00	762.00
IUUC-Xtr-132880	Xenopus tropicalis	29.31	2.00e-56	212.00
IUUC-Xma-134055	Xiphophorus maculatus	30.04	4.00e-54	204.00
IUUC-Yli-134342	Yarrowia lipolytica	23.98	1.00e-27	117.00
IUUC-Zma-135021	Zea mays	54.20	6.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence