iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111233

Ensembl Protein ID

Solyc12g094610.1.1

UniProt Accession

K4DH33; K4DH33_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g094610.1	Solyc12g094610.1.1	Solyc12g094610.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.30e-27	94.2	164	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            flCpI+le M+dPv++++G+ty+r++I+  l+sg +tcP+t++ l++ +l Pn +l++liq+wce+n+
   Q: 164  RFLCPITLETMTDPVTVSTGQTYERENIQHLLDSGCQTCPKTGEILEHLSLAPNFALKNLIQQWCEKNN 232
           69****************************************************************997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MALDRDHELE DGVTVEEEFG SSCQTSPQDK REVVRKLIGV IHNVGSYEEY RRSQREECHI 60
LSERLKLLLP LFEEIRDFEG QIPESGIECL MRLKKAFSSA KKLLKTCHCG SKIYLAIESE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTGG ATCGAGATCA CGAGCTTGAA GATGGGGTAA CCGTAGAGGA GGAATTCGGA 60
TCAAGCTGTC AAACGAGTCC ACAAGACAAA CGAGAAGTGG TACGCAAACT TATTGGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence