iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047641

Ensembl Protein ID

MLOC_54589.1

UniProt Accession

F2DSU6; F2DSU6_HORVV

Genbank Protein ID

BAJ98167.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK366964

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_54589	MLOC_54589.1	MLOC_54589.1
MLOC_54589	MLOC_54589.2	MLOC_54589.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-45	150.9	161	199
UBD/Beta-Prp	2.40e-54	185.6	14	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrtgvl 35
           gHt++v+c++f  ++  +++vsGs+D ++kvW+l+ ++l
   Q: 161  GHTGWVSCVRFspNNfaPTIVSGSWDRSVKVWNLTNCKL 199
           8***********7557888***************98876 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
           +  h +v+t+++  ++++++++++srd+++ vwd+t++              +r+l gh  +v++v +s+dg++ ++gs D+ +++wdlstg +++ 
   Q: 14   MRGHNDVVTAIATpIDNSPFIVSSSRDKSLLVWDLTNPIQatqdtsseygvpFRRLTGHGHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR 110
           556888*******************************99899******************************************************* PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgg 178
           + ghe++vls++fs ++  +vs+s+drti++w++  g+c ++        +gh+g+v+cv+++p++    +vsGs Dr v++W+l + kl  tl g 
   Q: 111  FVGHEKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTiggdlgGGEGHTGWVSCVRFSPNNfaPTIVSGSWDRSVKVWNLTNCKLRCTLDG- 205
           ********************************665.55666669**9999****************6568***************99999999999. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllkt 259
           h ++v  ++++++g  ++sg++dg   lwdl +g+ +++l +  + ++s+ fs  + + ++++   si+iWdl+s+ +++ 
   Q: 206  HGGYVSAVAVSPDGSLCASGGKDGVTLLWDLTEGKRLYSLDAG-SIINSLCFS-PNRYWLCAATQDSIKIWDLESKHIVQD 284
           ***************************************9875.689999999.677778888899*********998875 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MAGAQESLVY AGVMRGHNDV VTAIATPIDN SPFIVSSSRD KSLLVWDLTN PIQATQDTSS 60
EYGVPFRRLT GHGHFVQDVV LSSDGQFALS GSWDGELRLW DLSTGVTTRR FVGHEKDVLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGATGATTA GGCCCATGGG GCAGAAAAGA GAGAGGAGGA TGGTAAGCTA TAGGCCCATG 60
CGCAAGTGGA TCCGCAGCAG CATTTGTAAT GGGCCTGTTG TGTTTCAGCC CATAGACGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005886--C:plasma membrane
GO:0050832--P:defense response to fungus
GO:0060267--P:positive regulation of respiratory burst

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	98.99	8.00e-166	574.00
IUUC-Ago-007720	Ashbya gossypii	47.22	3.00e-81	293.00
IUUC-Bdi-015057	Brachypodium distachyon	95.18	0.00e+00	624.00
IUUC-Cne-026930	Cryptococcus neoformans	60.25	8.00e-111	391.00
IUUC-Cme-027251	Cyanidioschyzon merolae	55.28	6.00e-102	362.00
IUUC-Dme-032118	Drosophila melanogaster	61.30	4.00e-111	392.00
IUUC-Lpe-050762	Leersia perrieri	90.42	3.00e-173	599.00
IUUC-Mvi-060392	Microbotryum violaceum	60.87	5.00e-110	389.00
IUUC-Oba-075981	Oryza barthii	85.20	8.00e-156	541.00
IUUC-Ogl-077181	Oryza glaberrima	90.99	8.00e-173	598.00
IUUC-Ogu-078035	Oryza glumaepatula	90.99	8.00e-173	598.00
IUUC-Oin-079327	Oryza indica	90.99	8.00e-173	598.00
IUUC-Olo-081084	Oryza longistaminata	90.99	8.00e-173	598.00
IUUC-Ome-081612	Oryza meridionalis	90.99	8.00e-173	598.00
IUUC-Opu-083308	Oryza punctata	90.99	3.00e-173	599.00
IUUC-Oru-084200	Oryza rufipogon	90.99	8.00e-173	598.00
IUUC-Osa-085488	Oryza sativa	90.99	8.00e-173	598.00
IUUC-Pop-099419	Populus trichocarpa	70.41	9.00e-134	468.00
IUUC-Ptt-103839	Puccinia triticina	60.92	7.00e-113	398.00
IUUC-Sce-106224	Saccharomyces cerevisiae	44.82	1.00e-77	281.00
IUUC-Sit-110060	Setaria italica	88.59	5.00e-171	592.00
IUUC-Sbi-114681	Sorghum bicolor	86.45	4.00e-165	572.00
IUUC-Tru-118202	Takifugu rubripes	63.47	4.00e-116	409.00
IUUC-Tni-120260	Tetraodon nigroviridis	63.47	8.00e-116	408.00
IUUC-Tae-125589	Triticum aestivum	99.40	0.00e+00	647.00
IUUC-Tme-127105	Tuber melanosporum	57.50	3.00e-101	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence