iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017335

Ensembl Protein ID

Bra030874.1-P

UniProt Accession

M4EQ03; M4EQ03_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra030874	Bra030874.1	Bra030874.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	51.67	4.00e-14	74.70	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MESQDSDEPM QKKPHLLDSV SPTATAPNSS PSHPVAKSVD ATVLQLQNQK LVQQLDLQKK 60
RMYDVETKIH ELHLNQSSYD DQLISVNRLW NQLVDDLVLL GVRAGANQEA LKYLDIADKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGCC AGGACTCGGA CGAGCCGATG CAGAAGAAGC CTCATCTTCT GGACTCCGTC 60
TCTCCGACCG CCACGGCCCC TAACTCTTCG CCGTCTCATC CCGTCGCTAA AAGTGTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0045087--P:innate immune response
GO:0009965--P:leaf morphogenesis
GO:0010162--P:seed dormancy process
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	45.91	8.00e-121	427.00
IUUC-Aml-001976	Ailuropoda melanoleuca	28.52	4.00e-21	97.10
IUUC-Aca-005267	Anolis carolinensis	31.03	4.00e-23	101.00
IUUC-Aly-006469	Arabidopsis lyrata	88.44	0.00e+00	1427.00
IUUC-Ath-006615	Arabidopsis thaliana	85.60	0.00e+00	1419.00
IUUC-Acl-008319	Aspergillus clavatus	38.89	6.00e-11	62.40
IUUC-Ang-009601	Aspergillus niger	37.50	2.00e-10	60.50
IUUC-Aor-010142	Aspergillus oryzae	37.50	6.00e-10	59.30
IUUC-Bta-012357	Bos taurus	30.94	2.00e-24	108.00
IUUC-Bdi-015006	Brachypodium distachyon	50.06	0.00e+00	691.00
IUUC-Bol-016588	Brassica oleracea	99.09	0.00e+00	1560.00
IUUC-Cfa-020320	Canis familiaris	28.52	4.00e-21	96.70
IUUC-Csa-023509	Chlorocebus sabaeus	28.52	3.00e-21	97.10
IUUC-Cho-024616	Choloepus hoffmanni	28.89	9.00e-21	95.50
IUUC-Cin-025174	Ciona intestinalis	33.09	2.00e-30	127.00
IUUC-Csv-025830	Ciona savignyi	30.92	2.00e-28	121.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	43.14	1.00e-09	57.80
IUUC-Cne-026878	Cryptococcus neoformans	45.10	3.00e-12	67.40
IUUC-Dno-029537	Dasypus novemcinctus	28.52	4.00e-21	96.70
IUUC-Ete-033164	Echinops telfairi	29.75	6.00e-24	106.00
IUUC-Eca-033347	Equus caballus	28.52	4.00e-21	97.10
IUUC-Fca-036024	Felis catus	30.69	2.00e-26	114.00
IUUC-Fal-037622	Ficedula albicollis	31.48	3.00e-24	107.00
IUUC-Itr-048298	Ictidomys tridecemlineatus	30.69	1.00e-24	108.00
IUUC-Laf-054122	Loxodonta africana	28.52	4.00e-21	97.10
IUUC-Mcc-054647	Macaca mulatta	28.52	3.00e-21	97.10
IUUC-Meu-056559	Macropus eugenii	28.52	5.00e-21	96.70
IUUC-Mor-057068	Magnaporthe oryzae	28.27	3.00e-13	70.50
IUUC-Mtr-058247	Medicago truncatula	54.02	0.00e+00	787.00
IUUC-Mla-059072	Melampsora laricipopulina	25.24	2.00e-19	91.30
IUUC-Mdo-062599	Monodelphis domestica	28.52	4.00e-21	97.10
IUUC-Mpu-065910	Mustela putorius furo	28.52	4.00e-21	97.10
IUUC-Ncr-068695	Neurospora crassa	23.23	3.00e-11	63.90
IUUC-Nle-069058	Nomascus leucogenys	28.52	4.00e-21	97.10
IUUC-Ocu-074773	Oryctolagus cuniculus	28.52	4.00e-21	96.70
IUUC-Olo-080612	Oryza longistaminata	49.88	0.00e+00	646.00
IUUC-Opu-083683	Oryza punctata	50.41	0.00e+00	672.00
IUUC-Osa-085839	Oryza sativa	50.77	0.00e+00	678.00
IUUC-Oga-088961	Otolemur garnettii	30.40	6.00e-25	109.00
IUUC-Ptr-091602	Pan troglodytes	28.52	3.00e-21	97.10
IUUC-Pan-092263	Papio anubis	28.52	3.00e-21	97.10
IUUC-Psi-093554	Pelodiscus sinensis	29.24	2.00e-22	101.00
IUUC-Pno-095079	Phaeosphaeria nodorum	40.26	1.00e-13	71.20
IUUC-Ppa-095651	Physcomitrella patens	39.64	1.00e-142	500.00
IUUC-Pop-100039	Populus trichocarpa	61.14	0.00e+00	973.00
IUUC-Pva-102720	Pteropus vampyrus	28.52	4.00e-21	97.10
IUUC-Pte-104415	Pyrenophora teres	35.05	3.00e-13	70.10
IUUC-Pyt-104762	Pyrenophora triticirepentis	35.05	2.00e-13	70.50
IUUC-Sha-107000	Sarcophilus harrisii	28.52	5.00e-21	96.70
IUUC-Sja-107993	Schizosaccharomyces japonicus	25.99	2.00e-14	73.60
IUUC-Spo-108304	Schizosaccharomyces pombe	51.67	8.00e-15	75.50
IUUC-Smo-109550	Selaginella moellendorffii	39.73	4.00e-147	515.00
IUUC-Ssc-115723	Sus scrofa	28.52	3.00e-21	97.10
IUUC-Tgu-116549	Taeniopygia guttata	31.48	3.00e-24	107.00
IUUC-Tsy-118808	Tarsius syrichta	27.97	4.00e-21	96.70
IUUC-Tae-123217	Triticum aestivum	51.36	0.00e+00	735.00
IUUC-Tur-126160	Triticum urartu	49.82	0.00e+00	653.00
IUUC-Tme-127177	Tuber melanosporum	24.44	5.00e-12	66.20
IUUC-Ttr-128266	Tursiops truncatus	28.52	4.00e-21	97.10
IUUC-Uma-129488	Ustilago maydis	24.91	6.00e-16	79.30
IUUC-Vpa-130237	Vicugna pacos	28.52	4.00e-21	96.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence