iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087148

Ensembl Protein ID

ENSORLP00000009989.2

UniProt Accession

H2LV60; H2LV60_ORYLA

Genbank Protein ID

ENSORLP00000009989

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04011869

Gene Name

tmf1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000007962.2	ENSORLT00000009990.2	ENSORLP00000009989.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	59.26	0.00e+00	1001.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSWFNASHLS SFAKQALTSA QKSIDRVLDI QEEDQWGDTV VMPSDGKELG VFGGWGMTQW 60
EAPAEEKPTA PPPSSGAITT PVTRTVVDES ENFFSAFLSP GDVKVSKSPV VSVPPTKSQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTGGT TCAACGCATC TCACCTGTCC AGCTTCGCTA AACAAGCTCT AACATCAGCT 60
CAGAAGTCAA TCGATCGCGT CCTGGACATT CAAGAAGAAG ACCAGTGGGG TGACACCGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	28.59	2.00e-26	114.00
IUUC-Aml-001448	Ailuropoda melanoleuca	60.85	0.00e+00	918.00
IUUC-Atr-003092	Amborella trichopoda	31.93	2.00e-23	104.00
IUUC-Apl-003546	Anas platyrhynchos	59.22	0.00e+00	919.00
IUUC-Aca-004234	Anolis carolinensis	59.19	0.00e+00	941.00
IUUC-Ath-007364	Arabidopsis thaliana	29.69	7.00e-27	115.00
IUUC-Acl-008271	Aspergillus clavatus	29.81	4.00e-09	57.00
IUUC-Afl-008405	Aspergillus flavus	54.55	8.00e-04	39.30
IUUC-Afu-009059	Aspergillus fumigatus	31.96	2.00e-09	57.80
IUUC-Ani-009416	Aspergillus nidulans	26.92	4.00e-08	53.90
IUUC-Ang-009857	Aspergillus niger	31.96	2.00e-09	58.20
IUUC-Aor-009910	Aspergillus oryzae	54.55	8.00e-04	39.30
IUUC-Ate-010427	Aspergillus terreus	28.85	2.00e-07	51.60
IUUC-Ame-011270	Astyanax mexicanus	75.14	0.00e+00	1074.00
IUUC-Bgr-012100	Blumeria graminis	27.74	1.00e-08	55.50
IUUC-Bta-012337	Bos taurus	59.82	0.00e+00	917.00
IUUC-Bci-013775	Botrytis cinerea	30.93	9.00e-05	42.40
IUUC-Bdi-014582	Brachypodium distachyon	30.43	3.00e-22	100.00
IUUC-Cja-019803	Callithrix jacchus	59.50	0.00e+00	920.00
IUUC-Cfa-020451	Canis familiaris	59.26	0.00e+00	872.00
IUUC-Cpo-021327	Cavia porcellus	60.11	0.00e+00	903.00
IUUC-Cre-022628	Chlamydomonas reinhardtii	26.92	5.00e-04	39.70
IUUC-Csa-023803	Chlorocebus sabaeus	59.77	0.00e+00	922.00
IUUC-Cho-024293	Choloepus hoffmanni	62.91	8.00e-101	362.00
IUUC-Cin-025461	Ciona intestinalis	40.31	9.00e-33	133.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	32.29	2.00e-06	48.10
IUUC-Cme-027311	Cyanidioschyzon merolae	37.40	6.00e-04	39.30
IUUC-Dre-028098	Danio rerio	72.68	0.00e+00	1041.00
IUUC-Dno-029535	Dasypus novemcinctus	59.23	0.00e+00	900.00
IUUC-Dor-031120	Dipodomys ordii	58.74	0.00e+00	942.00
IUUC-Dse-031548	Dothistroma septosporum	54.05	5.00e-04	39.70
IUUC-Dme-031658	Drosophila melanogaster	32.21	3.00e-22	100.00
IUUC-Ete-032764	Echinops telfairi	53.57	3.00e-170	592.00
IUUC-Eca-034312	Equus caballus	59.77	0.00e+00	899.00
IUUC-Eeu-034967	Erinaceus europaeus	59.63	4.00e-168	584.00
IUUC-Fca-036312	Felis catus	59.98	0.00e+00	917.00
IUUC-Fal-036979	Ficedula albicollis	59.49	0.00e+00	857.00
IUUC-Fox-037833	Fusarium oxysporum	40.91	5.00e-05	43.50
IUUC-Gmo-039175	Gadus morhua	78.04	0.00e+00	852.00
IUUC-Ggr-039752	Gaeumannomyces graminis	29.17	1.00e-07	52.40
IUUC-Gga-041252	Gallus gallus	64.17	0.00e+00	791.00
IUUC-Gac-042186	Gasterosteus aculeatus	83.64	0.00e+00	856.00
IUUC-Gma-042878	Glycine max	35.54	4.00e-12	67.00
IUUC-Ggo-045127	Gorilla gorilla	59.50	0.00e+00	915.00
IUUC-Hsa-046889	Homo sapiens	59.61	0.00e+00	922.00
IUUC-Hvu-047231	Hordeum vulgare	30.05	2.00e-31	131.00
IUUC-Itr-048895	Ictidomys tridecemlineatus	57.61	0.00e+00	773.00
IUUC-Kpa-049375	Komagataella pastoris	30.69	9.00e-07	48.90
IUUC-Lch-049701	Latimeria chalumnae	61.81	0.00e+00	963.00
IUUC-Lpe-051071	Leersia perrieri	29.20	3.00e-15	77.80
IUUC-Loc-052900	Lepisosteus oculatus	70.52	0.00e+00	931.00
IUUC-Lma-053189	Leptosphaeria maculans	29.07	9.00e-10	58.90
IUUC-Laf-054583	Loxodonta africana	59.59	0.00e+00	898.00
IUUC-Meu-056215	Macropus eugenii	57.55	1.00e-90	327.00
IUUC-Mor-057227	Magnaporthe oryzae	30.61	2.00e-04	41.20
IUUC-Mpo-057315	Magnaporthe poae	38.33	3.00e-06	47.00
IUUC-Mtr-058276	Medicago truncatula	30.88	2.00e-18	87.80
IUUC-Mga-059916	Meleagris gallopavo	58.26	0.00e+00	845.00
IUUC-Mmr-061789	Microcebus murinus	61.89	0.00e+00	683.00
IUUC-Mdo-062174	Monodelphis domestica	59.50	0.00e+00	914.00
IUUC-Mmu-063422	Mus musculus	57.51	0.00e+00	868.00
IUUC-Mac-065498	Musa acuminata	30.48	3.00e-21	97.40
IUUC-Mpu-065744	Mustela putorius furo	60.12	0.00e+00	912.00
IUUC-Mlu-066925	Myotis lucifugus	59.48	0.00e+00	862.00
IUUC-Nfi-068254	Neosartorya fischeri	29.81	1.00e-09	58.50
IUUC-Ncr-068887	Neurospora crassa	24.32	2.00e-08	54.70
IUUC-Nle-070100	Nomascus leucogenys	59.66	0.00e+00	917.00
IUUC-Opr-071131	Ochotona princeps	57.82	0.00e+00	693.00
IUUC-Ont-071378	Oreochromis niloticus	75.44	0.00e+00	1333.00
IUUC-Oan-073705	Ornithorhynchus anatinus	59.08	0.00e+00	960.00
IUUC-Ocu-074158	Oryctolagus cuniculus	59.63	0.00e+00	959.00
IUUC-Oba-075498	Oryza barthii	30.67	3.00e-16	80.90
IUUC-Obr-076136	Oryza brachyantha	38.71	3.00e-07	51.20
IUUC-Ogl-077020	Oryza glaberrima	32.23	3.00e-23	103.00
IUUC-Ogu-078875	Oryza glumaepatula	29.92	4.00e-18	87.00
IUUC-Oin-079223	Oryza indica	32.23	4.00e-23	103.00
IUUC-Olo-080859	Oryza longistaminata	29.10	4.00e-16	80.50
IUUC-Ome-081621	Oryza meridionalis	29.46	4.00e-16	80.90
IUUC-Oni-082628	Oryza nivara	29.92	6.00e-16	79.70
IUUC-Opu-083825	Oryza punctata	29.46	2.00e-17	84.70
IUUC-Oru-084959	Oryza rufipogon	37.35	2.00e-12	68.20
IUUC-Osa-086104	Oryza sativa	32.23	4.00e-23	103.00
IUUC-Olu-087856	Ostreococcus lucimarinus	28.35	5.00e-10	59.70
IUUC-Oga-088598	Otolemur garnettii	58.50	0.00e+00	894.00
IUUC-Oar-090450	Ovis aries	59.10	0.00e+00	909.00
IUUC-Ptr-091659	Pan troglodytes	59.50	0.00e+00	919.00
IUUC-Pan-091964	Papio anubis	63.45	0.00e+00	746.00
IUUC-Psi-093585	Pelodiscus sinensis	64.87	0.00e+00	702.00
IUUC-Pma-094379	Petromyzon marinus	47.62	0.00e+00	685.00
IUUC-Pno-095032	Phaeosphaeria nodorum	35.19	5.00e-09	56.60
IUUC-Ppa-095425	Physcomitrella patens	31.37	3.00e-26	113.00
IUUC-Pfo-096386	Poecilia formosa	75.65	0.00e+00	1390.00
IUUC-Pab-098042	Pongo abelii	68.85	1.00e-121	430.00
IUUC-Pop-099005	Populus trichocarpa	27.53	4.00e-13	69.30
IUUC-Pca-100308	Procavia capensis	63.53	0.00e+00	679.00
IUUC-Ppe-101449	Prunus persica	40.44	3.00e-15	77.40
IUUC-Pva-103119	Pteropus vampyrus	55.54	2.00e-175	609.00
IUUC-Pte-104335	Pyrenophora teres	29.58	3.00e-09	57.80
IUUC-Pyt-104547	Pyrenophora triticirepentis	29.58	3.00e-09	57.40
IUUC-Rno-105578	Rattus norvegicus	59.32	0.00e+00	879.00
IUUC-Sha-106612	Sarcophilus harrisii	58.63	0.00e+00	864.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	56.52	1.90e-01	30.40
IUUC-Spo-108059	Schizosaccharomyces pombe	31.40	5.00e-08	52.80
IUUC-Ssl-108390	Sclerotinia sclerotiorum	28.99	2.00e-04	41.20
IUUC-Smo-108781	Selaginella moellendorffii	35.24	2.00e-05	43.10
IUUC-Sit-109754	Setaria italica	30.70	6.00e-23	103.00
IUUC-Sly-111573	Solanum lycopersicum	31.22	4.00e-23	103.00
IUUC-Sar-113118	Sorex araneus	62.16	0.00e+00	725.00
IUUC-Sbi-114519	Sorghum bicolor	31.01	8.00e-22	99.40
IUUC-Ssc-115826	Sus scrofa	56.27	0.00e+00	826.00
IUUC-Tgu-116702	Taeniopygia guttata	59.84	0.00e+00	869.00
IUUC-Tru-117915	Takifugu rubripes	78.08	0.00e+00	1077.00
IUUC-Tsy-119224	Tarsius syrichta	60.16	0.00e+00	923.00
IUUC-Tni-120157	Tetraodon nigroviridis	70.10	0.00e+00	1192.00
IUUC-Tca-121361	Theobroma cacao	28.20	2.00e-15	77.40
IUUC-Tre-122066	Trichoderma reesei	32.29	9.00e-07	48.90
IUUC-Tvi-122562	Trichoderma virens	31.25	5.00e-07	50.10
IUUC-Tae-123602	Triticum aestivum	29.74	1.00e-27	119.00
IUUC-Tme-126895	Tuber melanosporum	28.67	4.00e-08	53.50
IUUC-Tbe-128074	Tupaia belangeri	60.28	2.00e-147	516.00
IUUC-Ttr-128190	Tursiops truncatus	58.79	0.00e+00	902.00
IUUC-Vda-129710	Verticillium dahliae	28.57	3.00e-07	50.40
IUUC-Vpa-130072	Vicugna pacos	58.76	0.00e+00	810.00
IUUC-Vvi-130853	Vitis vinifera	35.17	2.00e-08	54.70
IUUC-Xtr-131969	Xenopus tropicalis	57.11	0.00e+00	725.00
IUUC-Xma-133623	Xiphophorus maculatus	82.75	0.00e+00	1237.00
IUUC-Yli-134550	Yarrowia lipolytica	44.83	2.00e-05	44.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence