iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037636

Ensembl Protein ID

ENSFALP00000006348.1

UniProt Accession

U3JU94; U3JU94_FICAL

Genbank Protein ID

ENSFALP00000006348

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000363

Gene Name

SMARCAD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000006089.1	ENSFALT00000006377.1	ENSFALP00000006348.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	43.53	3.00e-124	441.00	IUUC-Sce-106399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MSLYNLDRFR FERKGKGAEQ EPPSPAALAE APGAAAAVGA AAGEEEGTDD SNRPVTPASD 60
GSERTEYSTI PETPEAQRTV KESYFKRQRG VQFLDVSDSE EEEPRNVGAA KEAWAPRREV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG 60
GGGGGGGGGG GCCGCCTCAC ACCGCCCGCC GGGGCCCGCG ACAGGTGCGT GTGGGGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR009060--UBA-like

PROSITE

PS51140--CUE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0000792--C:heterochromatin
GO:0043596--C:nuclear replication fork
GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0051304--P:chromosome separation
GO:0000729--P:DNA double-strand break processing
GO:0070932--P:histone H3 deacetylation
GO:0070933--P:histone H4 deacetylation
GO:0000018--P:regulation of DNA recombination

KEGG

fab:101816642

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000567	Aegilops tauschii	36.60	7.00e-97	348.00
IUUC-Aml-002063	Ailuropoda melanoleuca	67.50	0.00e+00	1338.00
IUUC-Atr-003078	Amborella trichopoda	38.63	1.00e-103	370.00
IUUC-Apl-003860	Anas platyrhynchos	83.37	0.00e+00	1625.00
IUUC-Aca-004485	Anolis carolinensis	68.77	0.00e+00	1379.00
IUUC-Aly-006561	Arabidopsis lyrata	39.22	2.00e-104	373.00
IUUC-Ath-006832	Arabidopsis thaliana	40.19	9.00e-106	377.00
IUUC-Ago-007758	Ashbya gossypii	45.11	2.00e-132	466.00
IUUC-Acl-008226	Aspergillus clavatus	36.53	8.00e-135	474.00
IUUC-Afl-008556	Aspergillus flavus	38.15	2.00e-130	459.00
IUUC-Afu-008799	Aspergillus fumigatus	38.22	5.00e-136	478.00
IUUC-Ani-009127	Aspergillus nidulans	38.66	2.00e-129	456.00
IUUC-Ang-009676	Aspergillus niger	37.23	5.00e-132	465.00
IUUC-Aor-010184	Aspergillus oryzae	37.95	1.00e-131	464.00
IUUC-Ate-010559	Aspergillus terreus	36.95	1.00e-131	464.00
IUUC-Ame-011933	Astyanax mexicanus	60.12	0.00e+00	881.00
IUUC-Bta-012963	Bos taurus	65.83	0.00e+00	1310.00
IUUC-Bci-013670	Botrytis cinerea	35.04	3.00e-116	413.00
IUUC-Bdi-014286	Brachypodium distachyon	36.96	2.00e-100	360.00
IUUC-Bol-016519	Brassica oleracea	39.68	1.00e-105	377.00
IUUC-Bra-017239	Brassica rapa	39.46	9.00e-105	374.00
IUUC-Cel-018253	Caenorhabditis elegans	42.95	3.00e-140	492.00
IUUC-Cja-019465	Callithrix jacchus	66.22	0.00e+00	1302.00
IUUC-Cfa-020637	Canis familiaris	65.83	0.00e+00	1306.00
IUUC-Cpo-021822	Cavia porcellus	69.10	0.00e+00	1292.00
IUUC-Csa-023315	Chlorocebus sabaeus	73.73	0.00e+00	1231.00
IUUC-Cin-025444	Ciona intestinalis	50.15	3.00e-177	614.00
IUUC-Cgl-026383	Colletotrichum gloeosporioides	40.15	2.00e-103	370.00
IUUC-Cne-027090	Cryptococcus neoformans	36.75	5.00e-114	405.00
IUUC-Dre-028385	Danio rerio	57.50	0.00e+00	882.00
IUUC-Dno-028932	Dasypus novemcinctus	67.24	0.00e+00	1333.00
IUUC-Dse-031394	Dothistroma septosporum	36.51	2.00e-103	370.00
IUUC-Dme-031640	Drosophila melanogaster	46.63	2.00e-157	549.00
IUUC-Eca-033276	Equus caballus	67.31	0.00e+00	1340.00
IUUC-Fca-035936	Felis catus	65.83	0.00e+00	1288.00
IUUC-Fso-038229	Fusarium solani	34.48	4.00e-110	392.00
IUUC-Gmo-039654	Gadus morhua	57.37	0.00e+00	877.00
IUUC-Ggr-039922	Gaeumannomyces graminis	33.29	8.00e-93	335.00
IUUC-Gga-040646	Gallus gallus	75.38	0.00e+00	1592.00
IUUC-Gac-042320	Gasterosteus aculeatus	67.34	0.00e+00	815.00
IUUC-Gma-042832	Glycine max	39.89	9.00e-106	377.00
IUUC-Ggo-044875	Gorilla gorilla	59.79	0.00e+00	1163.00
IUUC-Hsa-046992	Homo sapiens	67.24	0.00e+00	1333.00
IUUC-Hvu-047408	Hordeum vulgare	35.25	5.00e-99	355.00
IUUC-Itr-047881	Ictidomys tridecemlineatus	84.78	0.00e+00	958.00
IUUC-Kpa-049212	Komagataella pastoris	42.43	5.00e-126	445.00
IUUC-Lpe-050987	Leersia perrieri	35.58	1.00e-98	354.00
IUUC-Loc-052272	Lepisosteus oculatus	54.73	0.00e+00	1001.00
IUUC-Lma-053118	Leptosphaeria maculans	43.52	9.00e-125	441.00
IUUC-Laf-053436	Loxodonta africana	65.58	0.00e+00	1300.00
IUUC-Mcc-055209	Macaca mulatta	73.57	0.00e+00	1271.00
IUUC-Mor-056994	Magnaporthe oryzae	35.28	2.00e-94	340.00
IUUC-Mpo-057305	Magnaporthe poae	33.99	3.00e-96	346.00
IUUC-Mtr-058432	Medicago truncatula	39.67	6.00e-104	371.00
IUUC-Mla-058972	Melampsora laricipopulina	42.29	4.00e-122	431.00
IUUC-Mga-059572	Meleagris gallopavo	70.38	0.00e+00	1326.00
IUUC-Mvi-060209	Microbotryum violaceum	39.79	2.00e-138	487.00
IUUC-Mmr-061416	Microcebus murinus	80.07	0.00e+00	968.00
IUUC-Mdo-062869	Monodelphis domestica	68.59	0.00e+00	1375.00
IUUC-Mmu-064272	Mus musculus	65.92	0.00e+00	1251.00
IUUC-Mac-064963	Musa acuminata	34.62	3.00e-95	342.00
IUUC-Mpu-065755	Mustela putorius furo	67.41	0.00e+00	1340.00
IUUC-Mlu-067604	Myotis lucifugus	66.38	0.00e+00	1341.00
IUUC-Nfi-068310	Neosartorya fischeri	37.94	5.00e-136	478.00
IUUC-Ncr-068841	Neurospora crassa	34.47	5.00e-111	395.00
IUUC-Nle-069227	Nomascus leucogenys	67.24	0.00e+00	1334.00
IUUC-Opr-071088	Ochotona princeps	69.39	0.00e+00	1084.00
IUUC-Ont-072291	Oreochromis niloticus	68.07	0.00e+00	840.00
IUUC-Oan-073460	Ornithorhynchus anatinus	78.45	0.00e+00	1276.00
IUUC-Ocu-074811	Oryctolagus cuniculus	67.08	0.00e+00	1310.00
IUUC-Oba-075463	Oryza barthii	37.34	1.00e-97	350.00
IUUC-Obr-076342	Oryza brachyantha	37.71	4.00e-100	358.00
IUUC-Ogu-078837	Oryza glumaepatula	37.34	6.00e-98	352.00
IUUC-Oin-079623	Oryza indica	37.34	4.00e-98	352.00
IUUC-Ome-081105	Oryza meridionalis	37.34	2.00e-98	353.00
IUUC-Oni-082598	Oryza nivara	37.34	5.00e-98	352.00
IUUC-Opu-084040	Oryza punctata	37.34	3.00e-98	353.00
IUUC-Oru-084219	Oryza rufipogon	37.34	4.00e-98	352.00
IUUC-Osa-085461	Oryza sativa	37.34	5.00e-98	352.00
IUUC-Ola-087307	Oryzias latipes	67.29	0.00e+00	801.00
IUUC-Olu-087812	Ostreococcus lucimarinus	38.16	3.00e-95	342.00
IUUC-Oga-089064	Otolemur garnettii	67.02	0.00e+00	1328.00
IUUC-Oar-090054	Ovis aries	67.08	0.00e+00	1341.00
IUUC-Ptr-091228	Pan troglodytes	67.37	0.00e+00	1337.00
IUUC-Pan-092769	Papio anubis	66.70	0.00e+00	1230.00
IUUC-Psi-093202	Pelodiscus sinensis	74.69	0.00e+00	1477.00
IUUC-Pma-094725	Petromyzon marinus	45.08	0.00e+00	855.00
IUUC-Pno-095130	Phaeosphaeria nodorum	35.42	5.00e-110	392.00
IUUC-Ppa-095559	Physcomitrella patens	40.11	2.00e-106	380.00
IUUC-Pfo-096546	Poecilia formosa	67.60	0.00e+00	841.00
IUUC-Pab-097698	Pongo abelii	67.05	0.00e+00	1321.00
IUUC-Pop-099986	Populus trichocarpa	39.67	1.00e-104	374.00
IUUC-Ppe-101649	Prunus persica	39.41	1.00e-103	370.00
IUUC-Pva-102138	Pteropus vampyrus	66.25	0.00e+00	1298.00
IUUC-Pgr-103272	Puccinia graminis	36.13	3.00e-123	436.00
IUUC-Ptt-103880	Puccinia triticina	36.62	1.00e-128	454.00
IUUC-Pte-104260	Pyrenophora teres	42.83	3.00e-117	416.00
IUUC-Pyt-104532	Pyrenophora triticirepentis	37.76	4.00e-90	326.00
IUUC-Rno-105903	Rattus norvegicus	66.06	0.00e+00	1251.00
IUUC-Sce-106399	Saccharomyces cerevisiae	43.53	2.00e-124	440.00
IUUC-Sha-106783	Sarcophilus harrisii	66.89	0.00e+00	1319.00
IUUC-Sja-107887	Schizosaccharomyces japonicus	40.62	6.00e-143	501.00
IUUC-Spo-108154	Schizosaccharomyces pombe	41.05	3.00e-146	512.00
IUUC-Smo-108759	Selaginella moellendorffii	40.54	1.00e-105	376.00
IUUC-Sit-110023	Setaria italica	36.07	9.00e-99	354.00
IUUC-Sly-111423	Solanum lycopersicum	37.28	9.00e-104	370.00
IUUC-Sbi-114688	Sorghum bicolor	36.23	5.00e-99	355.00
IUUC-Sre-114983	Sporisorium reilianum	37.77	2.00e-117	416.00
IUUC-Ssc-116030	Sus scrofa	66.22	0.00e+00	1292.00
IUUC-Tgu-117451	Taeniopygia guttata	90.91	0.00e+00	1396.00
IUUC-Tru-118600	Takifugu rubripes	66.98	0.00e+00	790.00
IUUC-Tsy-119130	Tarsius syrichta	60.25	0.00e+00	1058.00
IUUC-Tni-119758	Tetraodon nigroviridis	57.26	0.00e+00	866.00
IUUC-Tca-121797	Theobroma cacao	38.90	2.00e-104	373.00
IUUC-Tre-121883	Trichoderma reesei	40.86	4.00e-102	365.00
IUUC-Tvi-122333	Trichoderma virens	35.82	1.00e-110	394.00
IUUC-Tae-122848	Triticum aestivum	36.60	8.00e-97	348.00
IUUC-Tur-126594	Triticum urartu	36.60	2.00e-96	347.00
IUUC-Tme-127106	Tuber melanosporum	35.74	7.00e-122	431.00
IUUC-Tbe-127911	Tupaia belangeri	85.91	0.00e+00	884.00
IUUC-Ttr-128597	Tursiops truncatus	68.72	0.00e+00	1318.00
IUUC-Uma-129321	Ustilago maydis	36.56	5.00e-117	415.00
IUUC-Vpa-130686	Vicugna pacos	60.77	0.00e+00	1151.00
IUUC-Vvi-131046	Vitis vinifera	39.23	6.00e-104	371.00
IUUC-Xtr-132740	Xenopus tropicalis	64.54	0.00e+00	1127.00
IUUC-Xma-134260	Xiphophorus maculatus	55.68	0.00e+00	879.00
IUUC-Yli-134634	Yarrowia lipolytica	40.54	8.00e-139	487.00
IUUC-Zma-135493	Zea mays	34.75	3.00e-99	356.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence