iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__3562__AT5G38470.1	fgenesh2_kg.7__3562__AT5G38470.1	fgenesh2_kg.7__3562__AT5G38470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	5.80e-24	84.2	148	189
ULD/UDP/UBQ/UBQ_PIM	1.80e-23	82.9	1	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 148  LESTVQQILDMGggsWDRDTVVRALRAAFNNPERAVEYLYSG 189
           699************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg..vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktl+g++fe+ev++ dtv+++K++i++++g  +p+ +q LI++Gk+LkD+ttL+e+++ ++s+++++++k+k
   Q: 1    MKIFVKTLSGTNFEIEVKPADTVSDVKKAIETVKGaeYPAVKQMLIHQGKVLKDETTLEENNVVENSFIVIMLSKTK 77
           99***********************************************************************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKIFVKTLSG TNFEIEVKPA DTVSDVKKAI ETVKGAEYPA VKQMLIHQGK VLKDETTLEE 60
NNVVENSFIV IMLSKTKVSS SGASTASAPA PSATQAQTVA TPQVSAPTVS VPEPTSGTAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCTCTAT ACTTTGCTTC TCTCTCTAAC CTTCTCTCTT TTTTTTTCTC AAGTTTTTTC 60
TTTCTCTAAA CGATGAAGAT TTTCGTGAAG ACTCTCAGTG GTACGAACTT CGAGATCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0009409--P:response to cold

KEGG

aly:ARALYDRAFT_494129

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006688	Arabidopsis thaliana	92.33	2.00e-149	521.00
IUUC-Ago-007830	Ashbya gossypii	31.31	5.00e-17	81.60
IUUC-Bol-016493	Brassica oleracea	88.26	2.00e-111	395.00
IUUC-Bra-017582	Brassica rapa	88.66	5.00e-111	393.00
IUUC-Cel-018364	Caenorhabditis elegans	28.84	3.00e-20	92.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.94	7.00e-18	84.00
IUUC-Dse-031336	Dothistroma septosporum	47.29	2.00e-21	96.30
IUUC-Ggr-040116	Gaeumannomyces graminis	49.22	6.00e-22	97.80
IUUC-Mor-057287	Magnaporthe oryzae	50.00	1.00e-19	90.50
IUUC-Mpo-057609	Magnaporthe poae	48.41	2.00e-21	95.90
IUUC-Mtr-058713	Medicago truncatula	61.48	1.00e-113	402.00
IUUC-Mac-065180	Musa acuminata	65.05	2.00e-122	431.00
IUUC-Oba-075951	Oryza barthii	58.92	4.00e-103	367.00
IUUC-Obr-076631	Oryza brachyantha	67.94	2.00e-81	295.00
IUUC-Ogl-077152	Oryza glaberrima	58.92	4.00e-103	367.00
IUUC-Ogu-078896	Oryza glumaepatula	59.17	1.00e-103	369.00
IUUC-Ppe-101830	Prunus persica	68.17	1.00e-122	432.00
IUUC-Pte-104303	Pyrenophora teres	46.92	1.00e-22	100.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	46.92	1.00e-22	100.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	35.25	3.00e-42	165.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	44.00	8.00e-19	87.00
IUUC-Stu-112027	Solanum tuberosum	68.88	9.00e-135	472.00
IUUC-Vda-129946	Verticillium dahliae	48.46	2.00e-23	102.00
IUUC-Zma-135463	Zea mays	63.75	4.00e-74	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence