iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olu-087817

Ensembl Protein ID

ABP01217

UniProt Accession

A4S6H8; A4S6H8_OSTLU

Genbank Protein ID

ABO99389.1; ABP01217.1

Protein Name

Receptor of activated protein kinase C 1A, component of 40S small ribosomal subunit; Receptor of activated protein kinase C 1B, component of 40S small ribosomal subunit

Genbank Nucleotide ID

CP000593; CP000601

Gene Name

RACK1B; RACK1A; OSTLU_19794; OSTLU_48240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OSTLU_48240	ABP01217	ABP01217

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-46	151.4	148	183
UBD/Beta-Prp	7.20e-77	257.1	13	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
           H+++v+c++f    s++++vsG++D+ +kvW+l+ +
   Q: 148  HSEWVSCVRFspvtSNPIIVSGGWDKLVKVWNLTNC 183
           ************9766****************9875 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           gh+   +t+++   +++++l+++srd+t+++w++t++        rsl gh+ +v++v +s+dg++ ++gs D+t+++wdl+tg++++ + gh+++vls++
   Q: 13   GHEN-WVTSIATpLDNSDILLSSSRDKTVILWNLTREEEnygypRRSLHGHSHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFVGHTKDVLSVA 112
           5554.5666777799*********************99999************************************************************ PP
   S: 102  fspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           fs ++  +vsGs+d+ti++w++  + c ++    + h+++v+cv+++p +   ++vsG+ D+ v++W+l t++ +rt   ght++++ ++++++g  ++sg
   Q: 113  FSVDNRQIVSGSRDKTIKLWNTLGE-CKYTiqDADAHSEWVSCVRFSPVTsnPIIVSGGWDKLVKVWNL-TNCKIRTNLVGHTGYINAVTVSPDGSLCASG 211
           ********************87544.4444235678***********9876579***************.88888888777******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgd 255
           ++dg   lwdl +g+ +++l +  d ++ + fs  + + ++++ +  ++iWdl+s+ 
   Q: 212  GKDGVAMLWDLGEGKRLYSLDAG-DIIYGLCFS-PNRYWLCAATESCVKIWDLESKS 266
           ********************875.789999999.7888899999**********986 PP

Organism

Ostreococcus lucimarinus

Protein Sequence
(Fasta)

MATQMQLRGV LKGHENWVTS IATPLDNSDI LLSSSRDKTV ILWNLTREEE NYGYPRRSLH 60
GHSHFVQDVV ISSDGQFALS GSWDGTLRLW DLNTGTTTRR FVGHTKDVLS VAFSVDNRQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACTC AAATGCAGCT CAGAGGCGTG CTCAAGGGGT GCGTCGCGCG AATCGATGAT 60
CCGAGCGCGC GTCGCGTCGC GTCGACGGCG AACGCGCGGC GAACCGATCG TTCGTGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0418--Kinase
KW-0675--Receptor
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016301--F:kinase activity

KEGG

olu:OSTLU_19794; olu:OSTLU_48240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	69.72	1.00e-113	400.00
IUUC-Aml-001935	Ailuropoda melanoleuca	75.79	5.00e-143	497.00
IUUC-Atr-002694	Amborella trichopoda	75.48	2.00e-143	498.00
IUUC-Apl-003918	Anas platyrhynchos	78.01	1.00e-130	456.00
IUUC-Aca-004869	Anolis carolinensis	75.79	5.00e-143	497.00
IUUC-Aly-005832	Arabidopsis lyrata	68.52	1.00e-135	473.00
IUUC-Ath-007252	Arabidopsis thaliana	68.21	1.00e-135	473.00
IUUC-Ago-007720	Ashbya gossypii	53.21	3.00e-97	345.00
IUUC-Acl-008156	Aspergillus clavatus	68.89	2.00e-131	459.00
IUUC-Afl-008684	Aspergillus flavus	69.21	3.00e-132	462.00
IUUC-Afu-008867	Aspergillus fumigatus	69.52	2.00e-132	462.00
IUUC-Ani-009221	Aspergillus nidulans	70.48	3.00e-134	468.00
IUUC-Ang-009843	Aspergillus niger	69.52	9.00e-133	463.00
IUUC-Aor-010193	Aspergillus oryzae	69.21	3.00e-132	462.00
IUUC-Ate-010420	Aspergillus terreus	70.63	2.00e-122	429.00
IUUC-Ame-011199	Astyanax mexicanus	75.47	7.00e-143	497.00
IUUC-Bgr-012064	Blumeria graminis	69.21	7.00e-133	464.00
IUUC-Bta-013357	Bos taurus	75.79	5.00e-143	497.00
IUUC-Bci-013862	Botrytis cinerea	70.48	8.00e-136	473.00
IUUC-Bdi-014690	Brachypodium distachyon	69.14	5.00e-128	447.00
IUUC-Bol-016231	Brassica oleracea	68.52	1.00e-136	476.00
IUUC-Bra-016879	Brassica rapa	67.80	3.00e-135	472.00
IUUC-Cel-018335	Caenorhabditis elegans	65.51	6.00e-109	384.00
IUUC-Cja-019914	Callithrix jacchus	75.79	5.00e-143	497.00
IUUC-Cfa-020755	Canis familiaris	75.79	5.00e-143	497.00
IUUC-Cpo-022377	Cavia porcellus	75.79	2.00e-143	499.00
IUUC-Cre-022909	Chlamydomonas reinhardtii	80.32	5.00e-154	534.00
IUUC-Csa-023025	Chlorocebus sabaeus	75.79	9.00e-143	497.00
IUUC-Cin-025647	Ciona intestinalis	68.57	2.00e-126	442.00
IUUC-Csv-026027	Ciona savignyi	68.89	4.00e-126	441.00
IUUC-Cgl-026718	Colletotrichum gloeosporioides	73.78	6.00e-127	444.00
IUUC-Cne-026930	Cryptococcus neoformans	67.09	8.00e-131	457.00
IUUC-Cme-027251	Cyanidioschyzon merolae	63.58	1.00e-120	423.00
IUUC-Dre-028669	Danio rerio	75.47	1.00e-142	496.00
IUUC-Dno-029470	Dasypus novemcinctus	64.15	3.00e-109	385.00
IUUC-Dor-031098	Dipodomys ordii	66.67	2.00e-106	376.00
IUUC-Dse-031255	Dothistroma septosporum	69.84	8.00e-133	463.00
IUUC-Dme-032118	Drosophila melanogaster	67.52	1.00e-126	443.00
IUUC-Ete-033182	Echinops telfairi	67.86	3.00e-84	302.00
IUUC-Eca-033296	Equus caballus	79.73	6.00e-68	246.00
IUUC-Eeu-034771	Erinaceus europaeus	70.75	6.00e-132	461.00
IUUC-Fca-036315	Felis catus	75.79	5.00e-143	497.00
IUUC-Fal-036990	Ficedula albicollis	70.11	2.00e-74	269.00
IUUC-Fox-037702	Fusarium oxysporum	71.11	2.00e-137	479.00
IUUC-Fso-038384	Fusarium solani	71.43	2.00e-137	478.00
IUUC-Gmo-039630	Gadus morhua	75.08	1.00e-138	483.00
IUUC-Ggr-039985	Gaeumannomyces graminis	71.43	6.00e-137	477.00
IUUC-Gga-040540	Gallus gallus	75.79	5.00e-143	497.00
IUUC-Gac-041316	Gasterosteus aculeatus	72.38	6.00e-137	477.00
IUUC-Gma-042872	Glycine max	70.59	3.00e-140	488.00
IUUC-Ggo-045253	Gorilla gorilla	75.79	5.00e-143	497.00
IUUC-Hsa-046809	Homo sapiens	75.79	5.00e-143	497.00
IUUC-Hvu-047683	Hordeum vulgare	66.87	1.00e-125	439.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	75.79	5.00e-143	497.00
IUUC-Kpa-049214	Komagataella pastoris	54.37	5.00e-94	335.00
IUUC-Lch-049634	Latimeria chalumnae	72.64	7.00e-138	480.00
IUUC-Lpe-050762	Leersia perrieri	69.04	1.00e-128	449.00
IUUC-Loc-052163	Lepisosteus oculatus	75.16	4.00e-142	494.00
IUUC-Lma-053113	Leptosphaeria maculans	71.61	1.00e-136	476.00
IUUC-Laf-054422	Loxodonta africana	75.79	5.00e-143	497.00
IUUC-Mcc-055348	Macaca mulatta	75.79	1.00e-142	497.00
IUUC-Meu-056543	Macropus eugenii	75.79	3.00e-143	498.00
IUUC-Mor-057107	Magnaporthe oryzae	71.43	1.00e-136	476.00
IUUC-Mpo-057487	Magnaporthe poae	71.75	2.00e-137	479.00
IUUC-Mtr-058808	Medicago truncatula	71.52	5.00e-141	491.00
IUUC-Mla-058909	Melampsora laricipopulina	69.75	2.00e-135	472.00
IUUC-Mga-059387	Meleagris gallopavo	75.79	5.00e-143	497.00
IUUC-Mvi-060392	Microbotryum violaceum	68.69	4.00e-131	458.00
IUUC-Mmr-061141	Microcebus murinus	68.62	7.00e-105	370.00
IUUC-Mdo-062932	Monodelphis domestica	75.79	5.00e-143	497.00
IUUC-Mmu-064132	Mus musculus	75.79	5.00e-143	497.00
IUUC-Mac-064447	Musa acuminata	66.67	9.00e-125	437.00
IUUC-Mpu-066721	Mustela putorius furo	74.84	2.00e-139	486.00
IUUC-Mlu-068221	Myotis lucifugus	75.16	3.00e-131	458.00
IUUC-Nfi-068344	Neosartorya fischeri	69.52	2.00e-132	462.00
IUUC-Ncr-068722	Neurospora crassa	70.48	4.00e-136	474.00
IUUC-Nle-069865	Nomascus leucogenys	75.79	6.00e-143	498.00
IUUC-Opr-071100	Ochotona princeps	63.84	2.00e-110	389.00
IUUC-Ont-072287	Oreochromis niloticus	74.84	7.00e-142	493.00
IUUC-Oan-072788	Ornithorhynchus anatinus	75.79	5.00e-143	497.00
IUUC-Ocu-073844	Oryctolagus cuniculus	73.58	9.00e-137	477.00
IUUC-Oba-075981	Oryza barthii	66.14	1.00e-117	413.00
IUUC-Obr-076099	Oryza brachyantha	67.07	1.00e-125	440.00
IUUC-Ogl-077181	Oryza glaberrima	69.88	2.00e-129	452.00
IUUC-Ogu-078035	Oryza glumaepatula	69.88	2.00e-129	452.00
IUUC-Oin-079327	Oryza indica	69.88	2.00e-129	452.00
IUUC-Olo-081084	Oryza longistaminata	69.88	2.00e-129	452.00
IUUC-Ome-081612	Oryza meridionalis	69.88	2.00e-129	452.00
IUUC-Oni-082682	Oryza nivara	67.07	1.00e-125	439.00
IUUC-Opu-083308	Oryza punctata	69.88	1.00e-129	453.00
IUUC-Oru-084200	Oryza rufipogon	69.88	2.00e-129	452.00
IUUC-Osa-085488	Oryza sativa	69.88	2.00e-129	452.00
IUUC-Ola-086400	Oryzias latipes	74.53	1.00e-141	493.00
IUUC-Oga-088811	Otolemur garnettii	75.79	5.00e-143	497.00
IUUC-Oar-089962	Ovis aries	75.79	5.00e-143	497.00
IUUC-Ptr-091340	Pan troglodytes	75.79	5.00e-143	497.00
IUUC-Pan-091946	Papio anubis	75.79	1.00e-142	497.00
IUUC-Pma-094535	Petromyzon marinus	76.10	1.00e-142	496.00
IUUC-Pno-095100	Phaeosphaeria nodorum	74.18	9.00e-94	333.00
IUUC-Ppa-095588	Physcomitrella patens	85.03	5.00e-162	560.00
IUUC-Pfo-097311	Poecilia formosa	74.21	4.00e-141	491.00
IUUC-Pab-097863	Pongo abelii	75.79	5.00e-143	498.00
IUUC-Pop-099345	Populus trichocarpa	69.63	7.00e-139	484.00
IUUC-Pca-100594	Procavia capensis	74.84	4.00e-141	491.00
IUUC-Ppe-101743	Prunus persica	68.00	5.00e-135	471.00
IUUC-Pva-102746	Pteropus vampyrus	61.32	4.00e-107	378.00
IUUC-Pgr-103375	Puccinia graminis	52.55	7.00e-93	330.00
IUUC-Ptt-103839	Puccinia triticina	69.11	8.00e-133	463.00
IUUC-Pte-104026	Pyrenophora teres	71.61	1.00e-136	476.00
IUUC-Pyt-104584	Pyrenophora triticirepentis	71.61	9.00e-137	476.00
IUUC-Rno-104964	Rattus norvegicus	75.79	5.00e-143	497.00
IUUC-Sce-106224	Saccharomyces cerevisiae	51.77	6.00e-93	331.00
IUUC-Sha-107409	Sarcophilus harrisii	75.79	5.00e-143	497.00
IUUC-Sja-107971	Schizosaccharomyces japonicus	64.54	5.00e-118	414.00
IUUC-Spo-108297	Schizosaccharomyces pombe	62.30	3.00e-114	402.00
IUUC-Ssl-108479	Sclerotinia sclerotiorum	70.48	8.00e-136	473.00
IUUC-Smo-109017	Selaginella moellendorffii	76.34	5.00e-145	504.00
IUUC-Sit-110060	Setaria italica	68.94	8.00e-129	450.00
IUUC-Sly-111218	Solanum lycopersicum	70.85	4.00e-138	481.00
IUUC-Stu-112775	Solanum tuberosum	70.31	2.00e-137	478.00
IUUC-Sar-113173	Sorex araneus	75.79	5.00e-143	497.00
IUUC-Sbi-114610	Sorghum bicolor	67.48	2.00e-126	442.00
IUUC-Sre-115107	Sporisorium reilianum	70.93	2.00e-138	482.00
IUUC-Ssc-116218	Sus scrofa	73.90	3.00e-140	488.00
IUUC-Tru-118202	Takifugu rubripes	73.58	2.00e-139	485.00
IUUC-Tni-120260	Tetraodon nigroviridis	73.27	7.00e-139	484.00
IUUC-Tca-120951	Theobroma cacao	70.28	9.00e-140	486.00
IUUC-Tre-121961	Trichoderma reesei	71.43	2.00e-136	475.00
IUUC-Tvi-122447	Trichoderma virens	71.75	9.00e-137	477.00
IUUC-Tae-123560	Triticum aestivum	67.48	3.00e-126	441.00
IUUC-Tur-126335	Triticum urartu	74.16	3.00e-114	402.00
IUUC-Tme-127105	Tuber melanosporum	66.35	2.00e-122	429.00
IUUC-Tbe-128021	Tupaia belangeri	57.64	4.00e-60	221.00
IUUC-Ttr-128637	Tursiops truncatus	66.35	5.00e-119	418.00
IUUC-Uma-129634	Ustilago maydis	71.25	1.00e-138	483.00
IUUC-Vda-129923	Verticillium dahliae	71.43	8.00e-137	477.00
IUUC-Vpa-130410	Vicugna pacos	61.54	2.00e-85	306.00
IUUC-Vvi-131115	Vitis vinifera	70.77	2.00e-140	489.00
IUUC-Xtr-132105	Xenopus tropicalis	75.16	2.00e-142	495.00
IUUC-Xma-133875	Xiphophorus maculatus	74.53	2.00e-141	492.00
IUUC-Yli-134624	Yarrowia lipolytica	58.36	2.00e-111	392.00
IUUC-Zma-134987	Zea mays	69.02	1.00e-127	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence