iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099897

UUCD1 version

UUC-PoT-00010

Ensembl Protein ID

POPTR_0004s18200.1

UniProt Accession

A9P8X1; B9H1J1; A9P8X1_POPTR

Genbank Protein ID

ABK92824.1; EEE86036.2

Protein Name

E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein

Genbank Nucleotide ID

EF144589; CM000340

Gene Name

POPTR_0004s18200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s18200	POPTR_0004s18200.1	POPTR_0004s18200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.40e-32	112.7	112	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 112  KGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 159
           89*********************************************9 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSESKKITLK SSDGETFVVD EAVAVESQTI KHMIEDDCAD NEIPLPNVTS KILAKVIEYC 60
KKHVEAGSDK EKNVTGVTEK DESLKSWDTE FVKVDQNTLF DLILAANYLN IKGLLDLTCQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATGCCCT TTTCCTTCTC CGTGTTTACA AAGGATTCTT CAAAACCAAC CCCTTTTTTA 60
GCTTATTAAA AATCAGGACC TAAACGTAAT ACCCTGTCAT ATCCGAATCC GAAACACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0016874--F:ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s18200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000773	Aegilops tauschii	76.61	5.00e-64	236.00
IUUC-Bgr-012280	Blumeria graminis	50.69	4.00e-36	143.00
IUUC-Bci-013888	Botrytis cinerea	49.17	7.00e-29	119.00
IUUC-Bdi-014448	Brachypodium distachyon	71.84	7.00e-55	205.00
IUUC-Cin-025538	Ciona intestinalis	57.23	2.00e-38	150.00
IUUC-Cgl-026548	Colletotrichum gloeosporioides	49.66	3.00e-35	140.00
IUUC-Dse-031209	Dothistroma septosporum	48.12	7.00e-36	142.00
IUUC-Kpa-049138	Komagataella pastoris	44.62	5.00e-33	133.00
IUUC-Lch-050522	Latimeria chalumnae	58.18	4.00e-41	160.00
IUUC-Lpe-050890	Leersia perrieri	76.36	7.00e-56	208.00
IUUC-Lma-053020	Leptosphaeria maculans	47.62	1.00e-34	138.00
IUUC-Mla-059153	Melampsora laricipopulina	52.60	3.00e-39	153.00
IUUC-Olu-087667	Ostreococcus lucimarinus	67.74	3.00e-50	189.00
IUUC-Ptr-090872	Pan troglodytes	55.97	2.00e-36	144.00
IUUC-Pno-094810	Phaeosphaeria nodorum	45.58	2.00e-32	130.00
IUUC-Pgr-103499	Puccinia graminis	51.30	9.00e-40	155.00
IUUC-Pte-104224	Pyrenophora teres	46.90	2.00e-30	124.00
IUUC-Pyt-104750	Pyrenophora triticirepentis	47.62	2.00e-31	127.00
IUUC-Spo-108033	Schizosaccharomyces pombe	53.16	7.00e-39	152.00
IUUC-Sit-110769	Setaria italica	73.84	1.00e-55	207.00
IUUC-Sbi-114358	Sorghum bicolor	73.26	5.00e-53	199.00
IUUC-Tca-121469	Theobroma cacao	84.38	8.00e-62	228.00
IUUC-Tae-123642	Triticum aestivum	77.19	4.00e-64	236.00
IUUC-Vda-129691	Verticillium dahliae	46.67	1.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence