iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2020__AT1G18470.1	fgenesh2_kg.1__2020__AT1G18470.1	fgenesh2_kg.1__2020__AT1G18470.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	32.94	6.00e-08	55.80	IUUC-Dme-031819

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVFFPLWAFH AVVARGRFSL PAPVAPRNRH WAPCHAVVAT PLLVAFELLL CIYLESSYAR 60
WPPAVSLKIA FVPLFAFELT ILVDNLRMCR ALMPGDDDSI TDDAIWEALP HFWVAISMVF 120

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Nucleotide Sequence
(Fasta)

GGAAGGAGAA GAAGCAGGGG TCCATCATCA TCAAAAACAA CATTGCAGCA ATTGCGTTTT 60
CTCCAAATTA ATCGACTTTC AGAGATATTT TCCCATAGAG ATGGTTTCGA AGCTAACAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR019396--TM_Fragile-X-F-assoc
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Pfam

PF10269--Tmemb_185A

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_472066

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000162	Aegilops tauschii	40.91	7.00e-63	233.00
IUUC-Apl-003990	Anas platyrhynchos	43.48	2.00e-08	53.10
IUUC-Aca-004417	Anolis carolinensis	47.83	1.00e-08	53.90
IUUC-Acl-008137	Aspergillus clavatus	28.33	7.00e-06	44.70
IUUC-Ame-010985	Astyanax mexicanus	45.45	9.00e-10	57.80
IUUC-Bol-015478	Brassica oleracea	33.33	8.00e-08	54.70
IUUC-Bra-017001	Brassica rapa	32.10	1.00e-07	53.90
IUUC-Csv-025837	Ciona savignyi	35.44	4.00e-11	62.40
IUUC-Dre-027682	Danio rerio	42.37	7.00e-10	57.80
IUUC-Dse-031509	Dothistroma septosporum	37.04	6.00e-08	52.40
IUUC-Dme-031819	Drosophila melanogaster	32.94	3.00e-09	55.80
IUUC-Fal-036884	Ficedula albicollis	41.30	8.00e-08	51.20
IUUC-Gga-040920	Gallus gallus	43.48	2.00e-08	52.80
IUUC-Gma-043487	Glycine max	30.11	5.00e-07	52.00
IUUC-Hvu-047613	Hordeum vulgare	70.17	3.00e-171	593.00
IUUC-Lch-050100	Latimeria chalumnae	36.17	6.00e-07	48.50
IUUC-Mtr-058211	Medicago truncatula	31.11	2.00e-08	56.20
IUUC-Mga-059746	Meleagris gallopavo	43.48	3.00e-08	52.80
IUUC-Mmu-063340	Mus musculus	37.29	3.00e-09	56.20
IUUC-Opu-083722	Oryza punctata	68.22	1.00e-173	602.00
IUUC-Psi-093862	Pelodiscus sinensis	42.55	2.00e-08	53.10
IUUC-Pma-094277	Petromyzon marinus	51.02	6.00e-10	58.50
IUUC-Pop-099439	Populus trichocarpa	40.43	3.00e-07	53.10
IUUC-Ppe-101272	Prunus persica	66.59	2.00e-167	580.00
IUUC-Pyt-104665	Pyrenophora triticirepentis	32.26	2.00e-04	39.70
IUUC-Smo-108773	Selaginella moellendorffii	57.04	5.00e-123	433.00
IUUC-Sly-110945	Solanum lycopersicum	72.08	1.00e-171	595.00
IUUC-Tgu-116900	Taeniopygia guttata	41.30	8.00e-08	51.20
IUUC-Tca-120945	Theobroma cacao	30.00	1.00e-07	53.90
IUUC-Tur-126712	Triticum urartu	45.59	2.00e-39	155.00
IUUC-Vvi-131667	Vitis vinifera	40.43	1.00e-07	54.30
IUUC-Xtr-132169	Xenopus tropicalis	44.68	1.00e-08	53.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence