iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000011670.2	ENSCJAT00000022744.2	ENSCJAP00000021517.2
ENSCJAG00000011670.2	ENSCJAT00000022747.2	ENSCJAP00000021520.2
ENSCJAG00000011670.2	ENSCJAT00000022713.2	ENSCJAP00000021488.2
ENSCJAG00000011670.2	ENSCJAT00000062231.1	ENSCJAP00000046763.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.10e-10	40.3	489	534

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC+++g+    l++C+ C++++H +Cl ++  ++ p+   wiCp+C++
   Q: 489  DFCSVCRKSGQ----LLMCDTCSRVYHLDCLDPP-LKTIPKGM-WICPRCQD 534
           79*********....*******************.*******7.******85 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MELQTLQEAL KVEIQVHQKL VAQMKQDPQN ADLKKQLHEL QAKITALSEK QKRVVEQLRK 60
NLIVKQEQPD KFQIQPLPQS ENKLQTAQQQ PLQQLQQQQQ YHHHHAQQSA AASPNLTASQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCTAGA GAGCTGAAGG AGAACCAGTT TCTCCAAAAT TGGTAAGTGC TTTCACTAGG 60
CAGACATAGT ATGCCTGATG CTAGCTGGAT AATAATTCAA ATACTGTGAT TTTTTTTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:1990391--C:DNA repair complex
GO:0000118--C:histone deacetylase complex
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001656	Ailuropoda melanoleuca	96.18	0.00e+00	1047.00
IUUC-Atr-002930	Amborella trichopoda	46.43	7.00e-10	59.70
IUUC-Apl-003874	Anas platyrhynchos	88.09	0.00e+00	1028.00
IUUC-Aca-004684	Anolis carolinensis	86.84	0.00e+00	741.00
IUUC-Ame-010638	Astyanax mexicanus	66.07	6.00e-129	454.00
IUUC-Bgr-012025	Blumeria graminis	38.89	6.00e-09	57.00
IUUC-Bta-013460	Bos taurus	97.16	0.00e+00	1013.00
IUUC-Bci-013636	Botrytis cinerea	35.82	3.00e-09	58.20
IUUC-Cfa-020760	Canis familiaris	96.48	0.00e+00	1142.00
IUUC-Cpo-021549	Cavia porcellus	96.33	0.00e+00	1102.00
IUUC-Csa-023461	Chlorocebus sabaeus	99.33	0.00e+00	1045.00
IUUC-Dre-027928	Danio rerio	56.37	4.00e-159	555.00
IUUC-Dno-029450	Dasypus novemcinctus	95.92	0.00e+00	966.00
IUUC-Dor-030699	Dipodomys ordii	96.18	0.00e+00	1137.00
IUUC-Dse-031258	Dothistroma septosporum	42.31	9.00e-10	59.30
IUUC-Ete-033073	Echinops telfairi	82.79	0.00e+00	876.00
IUUC-Eca-033822	Equus caballus	94.13	0.00e+00	1020.00
IUUC-Fca-035562	Felis catus	95.89	0.00e+00	1134.00
IUUC-Fal-037269	Ficedula albicollis	88.16	0.00e+00	1078.00
IUUC-Gmo-038592	Gadus morhua	56.14	2.00e-123	436.00
IUUC-Gga-040795	Gallus gallus	88.45	0.00e+00	1083.00
IUUC-Gac-042224	Gasterosteus aculeatus	61.20	8.00e-174	603.00
IUUC-Ggo-045327	Gorilla gorilla	99.41	0.00e+00	1172.00
IUUC-Hsa-046675	Homo sapiens	99.56	0.00e+00	1177.00
IUUC-Itr-048946	Ictidomys tridecemlineatus	96.59	0.00e+00	667.00
IUUC-Lch-050609	Latimeria chalumnae	73.14	0.00e+00	800.00
IUUC-Loc-052407	Lepisosteus oculatus	70.32	0.00e+00	772.00
IUUC-Laf-053876	Loxodonta africana	97.78	0.00e+00	1033.00
IUUC-Mcc-054954	Macaca mulatta	96.64	0.00e+00	1124.00
IUUC-Meu-056821	Macropus eugenii	82.48	0.00e+00	1005.00
IUUC-Mor-056922	Magnaporthe oryzae	43.55	5.00e-11	63.90
IUUC-Mtr-058324	Medicago truncatula	43.10	2.00e-10	61.60
IUUC-Mga-059320	Meleagris gallopavo	88.18	0.00e+00	1043.00
IUUC-Mmr-061278	Microcebus murinus	94.15	0.00e+00	1081.00
IUUC-Mdo-062891	Monodelphis domestica	89.42	0.00e+00	1101.00
IUUC-Mmu-063907	Mus musculus	92.74	0.00e+00	1075.00
IUUC-Mac-065599	Musa acuminata	39.44	3.00e-11	63.90
IUUC-Mpu-065839	Mustela putorius furo	97.06	0.00e+00	1125.00
IUUC-Mlu-068142	Myotis lucifugus	97.79	0.00e+00	1130.00
IUUC-Nle-069423	Nomascus leucogenys	99.12	0.00e+00	1169.00
IUUC-Opr-070236	Ochotona princeps	96.64	0.00e+00	747.00
IUUC-Ont-071327	Oreochromis niloticus	56.78	4.00e-128	451.00
IUUC-Oan-073405	Ornithorhynchus anatinus	96.37	0.00e+00	958.00
IUUC-Ocu-074391	Oryctolagus cuniculus	95.31	0.00e+00	1110.00
IUUC-Ola-086548	Oryzias latipes	61.05	2.00e-177	615.00
IUUC-Oga-088488	Otolemur garnettii	98.38	0.00e+00	1138.00
IUUC-Oar-090334	Ovis aries	97.69	0.00e+00	1108.00
IUUC-Ptr-091018	Pan troglodytes	99.56	0.00e+00	1177.00
IUUC-Psi-093596	Pelodiscus sinensis	89.64	0.00e+00	901.00
IUUC-Pma-094616	Petromyzon marinus	63.67	4.00e-100	357.00
IUUC-Pfo-097233	Poecilia formosa	56.92	6.00e-161	560.00
IUUC-Pab-097801	Pongo abelii	99.27	0.00e+00	1172.00
IUUC-Pop-099691	Populus trichocarpa	44.29	1.00e-11	65.50
IUUC-Ppe-101956	Prunus persica	47.83	3.00e-13	70.50
IUUC-Pva-102419	Pteropus vampyrus	98.24	0.00e+00	1137.00
IUUC-Pyt-104775	Pyrenophora triticirepentis	37.88	2.00e-12	68.20
IUUC-Rno-104900	Rattus norvegicus	92.37	0.00e+00	1107.00
IUUC-Sha-107328	Sarcophilus harrisii	92.70	0.00e+00	1065.00
IUUC-Spo-108017	Schizosaccharomyces pombe	35.82	2.00e-10	60.80
IUUC-Sar-113573	Sorex araneus	99.05	0.00e+00	759.00
IUUC-Ssc-115924	Sus scrofa	98.67	0.00e+00	959.00
IUUC-Tgu-117422	Taeniopygia guttata	88.58	0.00e+00	1088.00
IUUC-Tru-118697	Takifugu rubripes	75.46	3.00e-103	369.00
IUUC-Tsy-119092	Tarsius syrichta	98.85	9.00e-179	620.00
IUUC-Tni-120185	Tetraodon nigroviridis	61.75	4.00e-129	455.00
IUUC-Tca-121730	Theobroma cacao	46.55	9.00e-11	62.40
IUUC-Ttr-128860	Tursiops truncatus	94.89	0.00e+00	1126.00
IUUC-Vpa-130333	Vicugna pacos	90.45	0.00e+00	1072.00
IUUC-Xtr-131763	Xenopus tropicalis	74.57	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence