iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107685

Ensembl Protein ID

EEB07543

UniProt Accession

B6K0S2; B6K0S2_SCHJY

Genbank Protein ID

EEB07543.2

Protein Name

Synviolin family ubiquitin-protein ligase Hrd1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_05274

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_05274	EEB07543	EEB07543

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-11	40.3	292	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....................kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++                     ++ p+ lpCgH+ h++Cl +w        ++++CP+Cr
   Q: 292  CTICREEMfrrdhppaetddvdspppglnMT-PKRLPCGHILHLNCLRNW------LERQQTCPVCR 351
           9*****9955555555544444333333333.999***************......**********8 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MKFVLYLLAS ALLFGISVIL CLYNSPNVYA ATIMISQSPL HITIGLNVIM CLFFAVAHVL 60
KTILFGTLQS FEVEHLYEQF WFTFAETCIA AVLFRETFGF IFFFLLSVFT LARVFHSICA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTTCG TGCTTTATCT GCTGGTACGT GCGGTTAATT TTGGGCCAGA ATCACTAACA 60
AACTAGGCGT CGGCACTTTT GTTCGGTATA TCTGTAATAC TGTGCCTGTA CAACAGTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0005938--C:cell cortex
GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010620--P:negative regulation of transcription by transcription factor catabolism
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000344	Aegilops tauschii	39.17	1.00e-23	102.00
IUUC-Aml-001539	Ailuropoda melanoleuca	28.24	2.00e-43	168.00
IUUC-Atr-002892	Amborella trichopoda	33.51	3.00e-48	184.00
IUUC-Apl-003404	Anas platyrhynchos	23.96	2.00e-20	92.00
IUUC-Aca-004799	Anolis carolinensis	27.93	9.00e-43	166.00
IUUC-Aly-006352	Arabidopsis lyrata	32.85	1.00e-45	175.00
IUUC-Ath-006702	Arabidopsis thaliana	31.88	7.00e-46	176.00
IUUC-Ago-007894	Ashbya gossypii	25.39	3.00e-25	107.00
IUUC-Acl-008041	Aspergillus clavatus	30.43	2.00e-48	185.00
IUUC-Afl-008427	Aspergillus flavus	30.57	1.00e-41	162.00
IUUC-Afu-009023	Aspergillus fumigatus	30.91	2.00e-49	189.00
IUUC-Ani-009133	Aspergillus nidulans	30.07	3.00e-52	197.00
IUUC-Ang-009612	Aspergillus niger	34.21	4.00e-50	191.00
IUUC-Aor-010045	Aspergillus oryzae	29.58	3.00e-46	177.00
IUUC-Ate-010533	Aspergillus terreus	30.83	5.00e-51	193.00
IUUC-Ame-011083	Astyanax mexicanus	28.44	9.00e-43	166.00
IUUC-Bgr-012122	Blumeria graminis	42.57	7.00e-32	130.00
IUUC-Bta-013375	Bos taurus	27.95	3.00e-43	167.00
IUUC-Bci-013675	Botrytis cinerea	43.87	9.00e-30	123.00
IUUC-Bdi-015070	Brachypodium distachyon	30.14	5.00e-41	160.00
IUUC-Bol-015674	Brassica oleracea	33.33	6.00e-45	172.00
IUUC-Bra-017516	Brassica rapa	33.14	1.00e-44	171.00
IUUC-Cel-018422	Caenorhabditis elegans	29.75	1.00e-38	152.00
IUUC-Cja-019779	Callithrix jacchus	27.64	1.00e-39	155.00
IUUC-Cfa-020189	Canis familiaris	27.79	6.00e-44	170.00
IUUC-Cpo-022209	Cavia porcellus	27.79	7.00e-44	169.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	28.40	8.00e-34	135.00
IUUC-Csa-023571	Chlorocebus sabaeus	27.79	1.00e-43	168.00
IUUC-Cho-024889	Choloepus hoffmanni	25.42	7.00e-39	153.00
IUUC-Cin-025215	Ciona intestinalis	25.36	1.00e-26	112.00
IUUC-Csv-026160	Ciona savignyi	30.74	2.00e-42	165.00
IUUC-Cne-027002	Cryptococcus neoformans	36.74	5.00e-62	230.00
IUUC-Cme-027285	Cyanidioschyzon merolae	33.64	8.00e-32	129.00
IUUC-Dre-027999	Danio rerio	29.00	5.00e-43	167.00
IUUC-Dno-029250	Dasypus novemcinctus	27.95	3.00e-43	167.00
IUUC-Dor-030718	Dipodomys ordii	29.28	4.00e-42	164.00
IUUC-Dse-031498	Dothistroma septosporum	26.11	4.00e-33	134.00
IUUC-Dme-031969	Drosophila melanogaster	29.46	3.00e-46	177.00
IUUC-Ete-032962	Echinops telfairi	23.58	3.00e-16	78.20
IUUC-Eca-033258	Equus caballus	27.95	2.00e-43	168.00
IUUC-Fca-035980	Felis catus	27.79	5.00e-44	170.00
IUUC-Fal-036758	Ficedula albicollis	23.85	5.00e-17	80.50
IUUC-Fox-037902	Fusarium oxysporum	29.45	8.00e-52	196.00
IUUC-Fso-038418	Fusarium solani	29.17	2.00e-48	186.00
IUUC-Gmo-039288	Gadus morhua	28.08	5.00e-39	153.00
IUUC-Ggr-040076	Gaeumannomyces graminis	30.15	3.00e-51	194.00
IUUC-Gga-040575	Gallus gallus	22.99	1.00e-20	92.80
IUUC-Gac-042347	Gasterosteus aculeatus	29.31	4.00e-42	164.00
IUUC-Gma-044123	Glycine max	29.97	9.00e-43	166.00
IUUC-Ggo-044858	Gorilla gorilla	27.95	6.00e-43	166.00
IUUC-Hsa-046412	Homo sapiens	27.95	3.00e-43	167.00
IUUC-Hvu-047279	Hordeum vulgare	30.66	1.00e-40	158.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	27.95	3.00e-43	167.00
IUUC-Kpa-049117	Komagataella pastoris	24.67	7.00e-29	119.00
IUUC-Lch-049533	Latimeria chalumnae	44.04	1.00e-20	92.40
IUUC-Lpe-051229	Leersia perrieri	36.73	2.00e-14	71.60
IUUC-Loc-052843	Lepisosteus oculatus	30.18	9.00e-31	124.00
IUUC-Lma-052997	Leptosphaeria maculans	29.47	5.00e-50	190.00
IUUC-Laf-053482	Loxodonta africana	27.95	4.00e-43	167.00
IUUC-Mcc-055075	Macaca mulatta	27.95	3.00e-43	167.00
IUUC-Meu-056683	Macropus eugenii	29.18	5.00e-36	143.00
IUUC-Mor-057082	Magnaporthe oryzae	43.05	1.00e-31	130.00
IUUC-Mpo-057573	Magnaporthe poae	30.40	3.00e-48	184.00
IUUC-Mtr-058601	Medicago truncatula	30.51	5.00e-45	173.00
IUUC-Mla-059168	Melampsora laricipopulina	33.24	4.00e-58	217.00
IUUC-Mga-059510	Meleagris gallopavo	48.31	2.00e-19	87.00
IUUC-Mvi-060515	Microbotryum violaceum	36.07	5.00e-50	190.00
IUUC-Mmr-060922	Microcebus murinus	27.79	9.00e-44	169.00
IUUC-Mdo-062491	Monodelphis domestica	28.08	4.00e-42	164.00
IUUC-Mmu-063770	Mus musculus	27.95	2.00e-43	168.00
IUUC-Mac-064789	Musa acuminata	30.85	3.00e-46	177.00
IUUC-Mpu-066107	Mustela putorius furo	27.95	4.00e-43	167.00
IUUC-Mlu-067918	Myotis lucifugus	27.52	6.00e-41	160.00
IUUC-Nfi-068389	Neosartorya fischeri	31.17	4.00e-49	187.00
IUUC-Ncr-068742	Neurospora crassa	29.06	1.00e-45	176.00
IUUC-Nle-069139	Nomascus leucogenys	27.95	3.00e-43	167.00
IUUC-Opr-070898	Ochotona princeps	29.41	3.00e-30	124.00
IUUC-Ont-071991	Oreochromis niloticus	30.84	4.00e-42	164.00
IUUC-Oan-073717	Ornithorhynchus anatinus	23.93	2.00e-20	91.70
IUUC-Ocu-074065	Oryctolagus cuniculus	28.24	9.00e-44	169.00
IUUC-Oba-075221	Oryza barthii	29.67	5.00e-42	163.00
IUUC-Obr-076914	Oryza brachyantha	30.30	9.00e-41	159.00
IUUC-Ogu-078124	Oryza glumaepatula	29.67	5.00e-42	163.00
IUUC-Oin-080013	Oryza indica	29.20	3.00e-40	157.00
IUUC-Olo-080247	Oryza longistaminata	30.27	3.00e-39	154.00
IUUC-Ome-081769	Oryza meridionalis	29.51	1.00e-41	162.00
IUUC-Oni-082946	Oryza nivara	29.67	5.00e-42	163.00
IUUC-Opu-083268	Oryza punctata	27.49	2.00e-26	111.00
IUUC-Oru-085114	Oryza rufipogon	29.67	5.00e-42	163.00
IUUC-Osa-085829	Oryza sativa	30.05	2.00e-42	164.00
IUUC-Ola-087449	Oryzias latipes	27.52	5.00e-41	160.00
IUUC-Olu-087894	Ostreococcus lucimarinus	33.33	1.00e-47	181.00
IUUC-Oga-089036	Otolemur garnettii	27.95	2.00e-43	168.00
IUUC-Oar-089715	Ovis aries	27.95	2.00e-43	167.00
IUUC-Ptr-091000	Pan troglodytes	27.95	3.00e-43	167.00
IUUC-Pan-092187	Papio anubis	27.79	1.00e-43	169.00
IUUC-Psi-093377	Pelodiscus sinensis	27.63	9.00e-40	156.00
IUUC-Pma-094759	Petromyzon marinus	33.76	5.00e-27	113.00
IUUC-Pno-094883	Phaeosphaeria nodorum	27.13	7.00e-44	170.00
IUUC-Ppa-095684	Physcomitrella patens	32.46	2.00e-41	161.00
IUUC-Pfo-096861	Poecilia formosa	27.83	4.00e-41	160.00
IUUC-Pab-098030	Pongo abelii	27.95	3.00e-43	167.00
IUUC-Pop-099245	Populus trichocarpa	31.59	5.00e-49	186.00
IUUC-Pca-100191	Procavia capensis	27.79	2.00e-40	158.00
IUUC-Ppe-101829	Prunus persica	31.79	1.00e-47	182.00
IUUC-Pva-102689	Pteropus vampyrus	28.24	4.00e-43	167.00
IUUC-Pgr-103286	Puccinia graminis	33.42	4.00e-57	214.00
IUUC-Ptt-103919	Puccinia triticina	33.33	5.00e-54	203.00
IUUC-Pte-104372	Pyrenophora teres	29.00	3.00e-54	204.00
IUUC-Pyt-104456	Pyrenophora triticirepentis	29.25	2.00e-52	199.00
IUUC-Rno-105723	Rattus norvegicus	27.95	2.00e-43	167.00
IUUC-Sce-106348	Saccharomyces cerevisiae	27.92	6.00e-28	116.00
IUUC-Sha-107300	Sarcophilus harrisii	29.08	1.00e-36	145.00
IUUC-Spo-108308	Schizosaccharomyces pombe	59.23	1.00e-120	425.00
IUUC-Ssl-108558	Sclerotinia sclerotiorum	43.23	1.00e-29	123.00
IUUC-Smo-109123	Selaginella moellendorffii	33.53	7.00e-45	172.00
IUUC-Sit-110276	Setaria italica	30.00	2.00e-41	161.00
IUUC-Sly-111819	Solanum lycopersicum	33.01	4.00e-43	166.00
IUUC-Stu-112048	Solanum tuberosum	30.47	3.00e-43	167.00
IUUC-Sar-113397	Sorex araneus	24.59	8.00e-16	76.30
IUUC-Sbi-114027	Sorghum bicolor	29.87	1.00e-45	175.00
IUUC-Sre-115212	Sporisorium reilianum	31.36	3.00e-45	174.00
IUUC-Ssc-116323	Sus scrofa	27.95	3.00e-43	167.00
IUUC-Tgu-116717	Taeniopygia guttata	23.86	1.00e-18	85.90
IUUC-Tru-118045	Takifugu rubripes	28.45	8.00e-44	169.00
IUUC-Tsy-118823	Tarsius syrichta	23.81	1.00e-27	114.00
IUUC-Tni-120106	Tetraodon nigroviridis	30.00	5.00e-33	133.00
IUUC-Tca-121462	Theobroma cacao	31.04	4.00e-45	173.00
IUUC-Tre-122204	Trichoderma reesei	40.65	3.00e-32	131.00
IUUC-Tvi-122550	Trichoderma virens	40.94	2.00e-31	129.00
IUUC-Tae-124064	Triticum aestivum	30.56	3.00e-40	157.00
IUUC-Tur-126538	Triticum urartu	26.65	5.00e-27	114.00
IUUC-Tme-127197	Tuber melanosporum	33.24	2.00e-51	195.00
IUUC-Tbe-127385	Tupaia belangeri	26.36	4.00e-40	157.00
IUUC-Ttr-128795	Tursiops truncatus	27.95	3.00e-43	167.00
IUUC-Uma-129401	Ustilago maydis	29.07	3.00e-33	134.00
IUUC-Vda-129968	Verticillium dahliae	41.06	2.00e-32	132.00
IUUC-Vpa-130483	Vicugna pacos	22.97	2.00e-16	78.60
IUUC-Vvi-130944	Vitis vinifera	31.79	7.00e-45	172.00
IUUC-Xtr-131884	Xenopus tropicalis	27.52	5.00e-41	160.00
IUUC-Xma-133488	Xiphophorus maculatus	27.52	2.00e-41	161.00
IUUC-Yli-134552	Yarrowia lipolytica	26.56	2.00e-32	131.00
IUUC-Zma-135530	Zea mays	30.68	3.00e-41	161.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence