iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132561

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ring finger protein 24

Genbank Nucleotide ID

AAMC01057100

Gene Name

rnf24

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000017989.2	ENSXETT00000039002.1	ENSXETP00000039002.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-07	29.8	78	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle+f  kd++ + pC+H+fh +Cl kw         +  CPlC+
   Q: 78   CTVCLEEFkpKDELGICPCKHAFHIKCLIKW------LEVRKVCPLCN 119
           9*******997779999**************......999*******7 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSPDFQHYSF RMPNIGFQNL PLNIYIVVFG TAIFVFILSL LFCCYLIRLR HQARKELYAY 60
KQVILKEKVK ELNLYEICTV CLEEFKPKDE LGICPCKHAF HIKCLIKWLE VRKVCPLCNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCCAG ATTTCCAGCA TTACAGCTTC AGAATGCCGA ATATTGGGTT CCAGAACCTG 60
CCTCTCAACA TCTACATTGT GGTGTTCGGT ACGGCCATAT TCGTCTTCAT CCTCAGCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001325	Ailuropoda melanoleuca	90.54	2.00e-76	277.00
IUUC-Apl-003423	Anas platyrhynchos	96.12	1.00e-68	251.00
IUUC-Aca-004989	Anolis carolinensis	57.36	7.00e-41	159.00
IUUC-Aly-005601	Arabidopsis lyrata	43.10	1.00e-11	62.80
IUUC-Ame-010971	Astyanax mexicanus	91.26	9.00e-51	191.00
IUUC-Bta-012688	Bos taurus	89.86	2.00e-75	273.00
IUUC-Cja-019693	Callithrix jacchus	90.54	1.00e-76	277.00
IUUC-Cfa-020659	Canis familiaris	90.54	2.00e-76	277.00
IUUC-Cpo-021977	Cavia porcellus	91.22	3.00e-77	279.00
IUUC-Csa-023052	Chlorocebus sabaeus	90.54	2.00e-76	277.00
IUUC-Cho-024589	Choloepus hoffmanni	90.30	2.00e-68	250.00
IUUC-Cin-025407	Ciona intestinalis	46.30	1.00e-23	101.00
IUUC-Csv-026249	Ciona savignyi	43.80	2.00e-24	105.00
IUUC-Dre-027784	Danio rerio	85.91	2.00e-69	254.00
IUUC-Dno-029622	Dasypus novemcinctus	88.51	6.00e-76	275.00
IUUC-Dor-030780	Dipodomys ordii	89.86	7.00e-76	275.00
IUUC-Ete-032257	Echinops telfairi	89.19	3.00e-72	263.00
IUUC-Eca-033551	Equus caballus	90.54	2.00e-76	277.00
IUUC-Eeu-034897	Erinaceus europaeus	89.19	2.00e-74	270.00
IUUC-Fca-035708	Felis catus	90.54	1.00e-76	277.00
IUUC-Fal-036814	Ficedula albicollis	96.12	2.00e-68	251.00
IUUC-Gmo-038553	Gadus morhua	83.11	2.00e-63	234.00
IUUC-Gga-040496	Gallus gallus	94.59	6.00e-72	262.00
IUUC-Gac-042434	Gasterosteus aculeatus	86.58	4.00e-69	252.00
IUUC-Ggo-044530	Gorilla gorilla	90.54	1.00e-76	278.00
IUUC-Hsa-046588	Homo sapiens	90.54	1.00e-76	278.00
IUUC-Itr-048721	Ictidomys tridecemlineatus	90.54	1.00e-76	278.00
IUUC-Lch-049966	Latimeria chalumnae	90.67	4.00e-76	276.00
IUUC-Loc-052245	Lepisosteus oculatus	87.25	2.00e-71	261.00
IUUC-Laf-053477	Loxodonta africana	90.54	2.00e-76	277.00
IUUC-Mcc-055700	Macaca mulatta	85.81	2.00e-68	251.00
IUUC-Meu-056179	Macropus eugenii	84.46	6.00e-69	252.00
IUUC-Mga-059784	Meleagris gallopavo	78.00	4.00e-60	223.00
IUUC-Mmr-060797	Microcebus murinus	90.54	2.00e-76	277.00
IUUC-Mdo-062152	Monodelphis domestica	93.92	4.00e-79	286.00
IUUC-Mmu-063431	Mus musculus	88.51	3.00e-75	273.00
IUUC-Mpu-066435	Mustela putorius furo	90.54	1.00e-76	278.00
IUUC-Mlu-067711	Myotis lucifugus	90.54	2.00e-76	277.00
IUUC-Nle-069294	Nomascus leucogenys	90.54	2.00e-76	277.00
IUUC-Opr-070557	Ochotona princeps	90.54	2.00e-76	277.00
IUUC-Ont-071797	Oreochromis niloticus	84.77	4.00e-68	249.00
IUUC-Oan-073727	Ornithorhynchus anatinus	64.66	1.00e-41	161.00
IUUC-Ocu-074412	Oryctolagus cuniculus	89.86	2.00e-76	277.00
IUUC-Ola-087239	Oryzias latipes	85.91	6.00e-66	242.00
IUUC-Oga-088923	Otolemur garnettii	90.54	9.00e-77	278.00
IUUC-Oar-090126	Ovis aries	89.86	9.00e-76	275.00
IUUC-Ptr-091225	Pan troglodytes	90.54	1.00e-76	278.00
IUUC-Pan-092018	Papio anubis	90.54	1.00e-76	278.00
IUUC-Psi-093254	Pelodiscus sinensis	62.04	8.00e-36	143.00
IUUC-Pma-094208	Petromyzon marinus	46.79	6.00e-24	102.00
IUUC-Pfo-097399	Poecilia formosa	85.91	3.00e-68	249.00
IUUC-Pab-098071	Pongo abelii	90.54	2.00e-76	277.00
IUUC-Pca-100136	Procavia capensis	81.08	4.00e-67	246.00
IUUC-Pva-102139	Pteropus vampyrus	91.06	1.00e-62	231.00
IUUC-Rno-105488	Rattus norvegicus	54.87	4.00e-29	119.00
IUUC-Sha-107160	Sarcophilus harrisii	92.57	2.00e-78	283.00
IUUC-Sar-113430	Sorex araneus	87.84	3.00e-73	266.00
IUUC-Ssc-115896	Sus scrofa	66.09	6.00e-42	162.00
IUUC-Tgu-117344	Taeniopygia guttata	95.15	1.00e-53	200.00
IUUC-Tru-117961	Takifugu rubripes	93.70	2.00e-65	240.00
IUUC-Tsy-118956	Tarsius syrichta	66.89	6.00e-50	189.00
IUUC-Tni-120481	Tetraodon nigroviridis	92.91	9.00e-65	238.00
IUUC-Tbe-127610	Tupaia belangeri	77.23	8.00e-41	157.00
IUUC-Ttr-128794	Tursiops truncatus	90.54	2.00e-76	277.00
IUUC-Vpa-130388	Vicugna pacos	90.10	1.00e-50	190.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence