iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090717

UUCD1 version

UUC-PaT-00432

Ensembl Protein ID

ENSPTRP00000021298.3

UniProt Accession

H2QIP3; H2QIP3_PANTR

Genbank Protein ID

JAA04844.1; JAA18004.1; JAA28642.1; JAA41392.1

Protein Name

WD repeat domain 33

Genbank Nucleotide ID

AACZ03020875; GABF01004141; GABD01004458; GABE01003347

Gene Name

WDR33

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000012435.4	ENSPTRT00000023092.3	ENSPTRP00000021298.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-30	101.9	201	231
UBD/Beta-Prp	8.00e-65	218.9	197	403

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H++ ++  +f  +d+ ++++sdDgt+++WD+
   Q: 201  HKEAIREASFspTDNKFATCSDDGTVRIWDF 231
           999999999**555****************6 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlk 91
           ++++hk+ i+   fsp ++ +at s+dgt+++wd+ +    r l gh a v++v+++p++ + v+gs+D  + ik wd++tg+ + tl+
   Q: 197  MFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDsqQPIKFWDPKTGQSLATLH 285
           6789999******************************9*9*****************************9999**************** PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           +h+++v+ ++++ +g++l+++s+d   +++d+++ ++  ++++gh++  + v++hp    l++sG+ D+ + +W +  +k +  ++ +h
   Q: 286  AHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHeGLFASGGSDGSLLFWHVGVEKEVGGMEMAH 374
           ************************************9999************************************************* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwd 208
           ++++ sl++++ g  l sgs+d t k+w 
   Q: 375  EGMIWSLAWHPLGHILCSGSNDHTSKFWT 403
           ****************************6 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MATEIGSPPR FFHMPRFQHQ APRQLFYKRP DFAQQQAMQQ LTFDGKRMRK AVNRKTIDYN 60
PSVIKYLENR IWQRDQRDMR AIQPDAGYYN DLVPPIGMLN NPMNAVTTKF VRTSTNKVKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGCGTGAT GACCCCAGAG CGTGCGTTCG GTGGCCCATA GGGGAAGATG GCGGCTGCTC 60
CTTTGGAGGA GCGGGATTGA GAGGATCGGG GTGGGGAGAC CAAACAAGAG AGACATTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR008160--Collagen
IPR016133--Insect_antifreeze_prot
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01391--Collagen
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0005578--C:proteinaceous extracellular matrix
GO:0003723--F:RNA binding
GO:0006379--P:mRNA cleavage

KEGG

ptr:470527

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	49.64	2.00e-121	429.00
IUUC-Aml-001363	Ailuropoda melanoleuca	99.84	0.00e+00	1169.00
IUUC-Atr-003030	Amborella trichopoda	56.27	5.00e-135	474.00
IUUC-Apl-003409	Anas platyrhynchos	97.15	0.00e+00	1143.00
IUUC-Aca-004694	Anolis carolinensis	98.07	0.00e+00	1103.00
IUUC-Aly-006063	Arabidopsis lyrata	54.63	1.00e-134	473.00
IUUC-Ath-006583	Arabidopsis thaliana	50.69	7.00e-129	454.00
IUUC-Ago-007805	Ashbya gossypii	41.42	5.00e-80	291.00
IUUC-Acl-008075	Aspergillus clavatus	41.00	8.00e-92	331.00
IUUC-Afl-008582	Aspergillus flavus	41.82	5.00e-90	325.00
IUUC-Afu-008817	Aspergillus fumigatus	41.01	2.00e-79	290.00
IUUC-Ani-009391	Aspergillus nidulans	39.90	5.00e-84	305.00
IUUC-Ang-009750	Aspergillus niger	42.90	1.00e-75	276.00
IUUC-Aor-010085	Aspergillus oryzae	40.50	2.00e-91	329.00
IUUC-Ate-010397	Aspergillus terreus	40.75	6.00e-91	328.00
IUUC-Ame-010741	Astyanax mexicanus	85.76	5.00e-172	598.00
IUUC-Bgr-012169	Blumeria graminis	48.90	6.00e-98	351.00
IUUC-Bta-013265	Bos taurus	99.51	0.00e+00	1175.00
IUUC-Bci-013762	Botrytis cinerea	45.71	4.00e-102	365.00
IUUC-Bdi-014849	Brachypodium distachyon	55.73	1.00e-132	466.00
IUUC-Bol-015325	Brassica oleracea	54.39	6.00e-139	487.00
IUUC-Bra-017187	Brassica rapa	54.28	1.00e-138	486.00
IUUC-Cel-018378	Caenorhabditis elegans	50.72	7.00e-144	504.00
IUUC-Cja-019547	Callithrix jacchus	99.84	0.00e+00	1179.00
IUUC-Cfa-020031	Canis familiaris	99.84	0.00e+00	1164.00
IUUC-Cpo-021554	Cavia porcellus	94.60	0.00e+00	1068.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	42.20	2.00e-70	259.00
IUUC-Csa-023146	Chlorocebus sabaeus	99.67	0.00e+00	1162.00
IUUC-Cho-024679	Choloepus hoffmanni	89.76	0.00e+00	1029.00
IUUC-Cin-025415	Ciona intestinalis	59.41	3.00e-170	592.00
IUUC-Csv-026003	Ciona savignyi	60.26	1.00e-173	602.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	46.85	3.00e-99	355.00
IUUC-Cne-026983	Cryptococcus neoformans	42.89	4.00e-96	345.00
IUUC-Cme-027147	Cyanidioschyzon merolae	51.38	1.00e-117	416.00
IUUC-Dre-028545	Danio rerio	90.64	0.00e+00	1087.00
IUUC-Dno-029677	Dasypus novemcinctus	99.51	0.00e+00	1162.00
IUUC-Dse-031371	Dothistroma septosporum	42.20	8.00e-87	314.00
IUUC-Dme-031663	Drosophila melanogaster	67.44	0.00e+00	685.00
IUUC-Ete-032511	Echinops telfairi	91.71	0.00e+00	1104.00
IUUC-Eca-034152	Equus caballus	99.84	0.00e+00	1166.00
IUUC-Eeu-034560	Erinaceus europaeus	86.31	6.00e-121	429.00
IUUC-Fca-035820	Felis catus	99.67	0.00e+00	1164.00
IUUC-Fox-037958	Fusarium oxysporum	45.90	3.00e-97	348.00
IUUC-Fso-038162	Fusarium solani	45.63	9.00e-96	344.00
IUUC-Gmo-039708	Gadus morhua	89.05	0.00e+00	1050.00
IUUC-Ggr-040031	Gaeumannomyces graminis	39.80	9.00e-84	304.00
IUUC-Gga-040963	Gallus gallus	97.31	0.00e+00	1144.00
IUUC-Gac-041541	Gasterosteus aculeatus	87.35	0.00e+00	1048.00
IUUC-Gma-044352	Glycine max	56.12	2.00e-133	469.00
IUUC-Ggo-045564	Gorilla gorilla	99.67	0.00e+00	1160.00
IUUC-Hsa-045833	Homo sapiens	100.00	0.00e+00	1167.00
IUUC-Hvu-047848	Hordeum vulgare	52.48	2.00e-92	332.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	99.84	0.00e+00	1164.00
IUUC-Kpa-049308	Komagataella pastoris	40.31	2.00e-82	299.00
IUUC-Lch-050525	Latimeria chalumnae	94.14	0.00e+00	1044.00
IUUC-Lpe-051364	Leersia perrieri	51.06	2.00e-116	413.00
IUUC-Loc-052696	Lepisosteus oculatus	89.30	0.00e+00	1075.00
IUUC-Lma-052951	Leptosphaeria maculans	47.70	5.00e-103	368.00
IUUC-Laf-053653	Loxodonta africana	99.84	0.00e+00	1161.00
IUUC-Mcc-055797	Macaca mulatta	100.00	0.00e+00	1166.00
IUUC-Meu-056331	Macropus eugenii	93.65	0.00e+00	712.00
IUUC-Mor-057168	Magnaporthe oryzae	41.22	8.00e-92	331.00
IUUC-Mpo-057510	Magnaporthe poae	42.25	3.00e-61	228.00
IUUC-Mtr-058032	Medicago truncatula	55.87	1.00e-132	466.00
IUUC-Mla-058852	Melampsora laricipopulina	47.45	2.00e-112	399.00
IUUC-Mga-059311	Meleagris gallopavo	96.98	0.00e+00	1138.00
IUUC-Mvi-060544	Microbotryum violaceum	51.31	3.00e-114	405.00
IUUC-Mmr-061143	Microcebus murinus	99.84	0.00e+00	1164.00
IUUC-Mdo-061977	Monodelphis domestica	99.48	0.00e+00	1144.00
IUUC-Mmu-063922	Mus musculus	99.18	0.00e+00	1173.00
IUUC-Mac-064961	Musa acuminata	57.40	4.00e-138	484.00
IUUC-Mpu-066079	Mustela putorius furo	99.80	0.00e+00	963.00
IUUC-Mlu-067247	Myotis lucifugus	99.51	0.00e+00	1179.00
IUUC-Nfi-068255	Neosartorya fischeri	41.94	2.00e-86	312.00
IUUC-Ncr-068909	Neurospora crassa	44.05	1.00e-98	354.00
IUUC-Nle-068994	Nomascus leucogenys	100.00	0.00e+00	1166.00
IUUC-Opr-071079	Ochotona princeps	97.72	0.00e+00	1177.00
IUUC-Ont-071971	Oreochromis niloticus	89.84	0.00e+00	1085.00
IUUC-Oan-073135	Ornithorhynchus anatinus	99.39	0.00e+00	980.00
IUUC-Ocu-073982	Oryctolagus cuniculus	99.50	0.00e+00	1164.00
IUUC-Oba-075297	Oryza barthii	51.73	3.00e-119	422.00
IUUC-Obr-076641	Oryza brachyantha	55.95	1.00e-130	460.00
IUUC-Ogl-077539	Oryza glaberrima	58.78	9.00e-95	340.00
IUUC-Ogu-078807	Oryza glumaepatula	51.73	3.00e-119	422.00
IUUC-Oin-079229	Oryza indica	56.00	2.00e-132	466.00
IUUC-Olo-080371	Oryza longistaminata	51.62	3.00e-117	415.00
IUUC-Ome-081149	Oryza meridionalis	50.78	6.00e-119	421.00
IUUC-Oni-082970	Oryza nivara	51.73	3.00e-119	422.00
IUUC-Opu-083415	Oryza punctata	51.20	6.00e-117	414.00
IUUC-Oru-085236	Oryza rufipogon	51.73	1.00e-119	423.00
IUUC-Ola-087421	Oryzias latipes	91.20	0.00e+00	1082.00
IUUC-Olu-087821	Ostreococcus lucimarinus	49.45	7.00e-104	370.00
IUUC-Oga-088132	Otolemur garnettii	99.84	0.00e+00	1164.00
IUUC-Oar-089513	Ovis aries	99.51	0.00e+00	1175.00
IUUC-Pan-092108	Papio anubis	100.00	0.00e+00	1166.00
IUUC-Psi-093892	Pelodiscus sinensis	99.29	0.00e+00	1124.00
IUUC-Pma-094561	Petromyzon marinus	75.43	0.00e+00	941.00
IUUC-Pno-094943	Phaeosphaeria nodorum	45.04	2.00e-103	370.00
IUUC-Ppa-095359	Physcomitrella patens	61.23	3.00e-144	505.00
IUUC-Pfo-096516	Poecilia formosa	90.88	0.00e+00	1047.00
IUUC-Pab-097759	Pongo abelii	100.00	0.00e+00	1166.00
IUUC-Pop-098892	Populus trichocarpa	56.91	2.00e-137	482.00
IUUC-Pca-100405	Procavia capensis	89.15	8.00e-109	389.00
IUUC-Ppe-101957	Prunus persica	55.21	6.00e-135	474.00
IUUC-Pva-102918	Pteropus vampyrus	99.51	0.00e+00	1162.00
IUUC-Pgr-103594	Puccinia graminis	50.81	8.00e-116	411.00
IUUC-Ptt-103879	Puccinia triticina	54.52	4.00e-101	362.00
IUUC-Pte-104419	Pyrenophora teres	45.69	3.00e-104	372.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	47.80	2.00e-102	366.00
IUUC-Rno-105838	Rattus norvegicus	98.82	0.00e+00	1205.00
IUUC-Sce-106331	Saccharomyces cerevisiae	39.14	1.00e-76	280.00
IUUC-Sha-107435	Sarcophilus harrisii	98.95	0.00e+00	1137.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	44.78	3.00e-100	358.00
IUUC-Spo-108163	Schizosaccharomyces pombe	44.53	2.00e-103	369.00
IUUC-Smo-109602	Selaginella moellendorffii	57.33	6.00e-135	473.00
IUUC-Sit-109729	Setaria italica	57.33	3.00e-134	472.00
IUUC-Sly-111679	Solanum lycopersicum	57.82	3.00e-138	485.00
IUUC-Sar-113157	Sorex araneus	98.85	0.00e+00	1173.00
IUUC-Sbi-114853	Sorghum bicolor	53.68	3.00e-133	468.00
IUUC-Sre-115085	Sporisorium reilianum	41.13	3.00e-101	362.00
IUUC-Ssc-116286	Sus scrofa	99.34	0.00e+00	1163.00
IUUC-Tgu-117219	Taeniopygia guttata	97.31	0.00e+00	1145.00
IUUC-Tru-117550	Takifugu rubripes	90.24	0.00e+00	1057.00
IUUC-Tsy-119294	Tarsius syrichta	99.84	0.00e+00	1167.00
IUUC-Tni-120561	Tetraodon nigroviridis	89.16	0.00e+00	1068.00
IUUC-Tca-121347	Theobroma cacao	56.12	4.00e-135	475.00
IUUC-Tre-122018	Trichoderma reesei	43.91	2.00e-97	349.00
IUUC-Tvi-122413	Trichoderma virens	43.91	2.00e-96	346.00
IUUC-Tae-123904	Triticum aestivum	51.92	2.00e-131	462.00
IUUC-Tme-127077	Tuber melanosporum	50.54	3.00e-105	375.00
IUUC-Tbe-127744	Tupaia belangeri	74.12	6.00e-160	558.00
IUUC-Ttr-128777	Tursiops truncatus	90.77	0.00e+00	1024.00
IUUC-Uma-129568	Ustilago maydis	43.54	9.00e-98	350.00
IUUC-Vda-129834	Verticillium dahliae	43.97	3.00e-95	342.00
IUUC-Vpa-130563	Vicugna pacos	84.57	4.00e-76	279.00
IUUC-Vvi-131360	Vitis vinifera	57.03	1.00e-136	480.00
IUUC-Xtr-132630	Xenopus tropicalis	88.58	0.00e+00	1062.00
IUUC-Xma-133665	Xiphophorus maculatus	91.40	0.00e+00	1058.00
IUUC-Yli-134556	Yarrowia lipolytica	37.19	5.00e-85	308.00
IUUC-Zma-135787	Zea mays	55.38	4.00e-135	475.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence