iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-051784

Ensembl Protein ID

ENSLOCP00000001934.1

UniProt Accession

W5M0M7; W5M0M7_LEPOC

Genbank Protein ID

ENSLOCP00000001934

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01024494

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000001669.1	ENSLOCT00000001939.1	ENSLOCP00000001934.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.80e-06	26.5	537	582
E3 activity/RING/RING	2.90e-08	34.3	538	575

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           +C+I ++ M+  vv+ +G+ + +s+++kwl  +++ cP+++qp++++
   Q: 537  VCAICFQEMSSAVVTYCGHFFHASCLRKWLYVQET-CPMCHQPVKPR 582
           8****************************999998.*******9765 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC+++++   +v+ CgH+fha+Cl kw       + + +CP C
   Q: 538  CAICFQEMSS-AVVTYCGHFFHASCLRKW------LYVQETCPMC 575
           ********99.788***************......********** PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

FFKMPRLEEI ANVALRVPSI MVLDLLYKCD VESFTEQLKA RNEDMLFKYK YVIWNVYYLG 60
HLVSVVVLVL PLRHIVKLYL YILTALLLYV GHQISRDYVR GEIQHGYEGA VYLDAFAFHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTAAAA TGCCGCGGTT GGAGGAAATT GCAAACGTCG CCTTGAGAGT TCCCAGCATT 60
ATGGTCTTAG ACCTCTTGTA CAAATGTGAC GTTGAGAGTT TCACCGAGCA GCTGAAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025754--TRC8_N_dom
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13705--TRC8_N
PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005255	Anolis carolinensis	65.85	0.00e+00	658.00
IUUC-Dre-027727	Danio rerio	74.01	0.00e+00	771.00
IUUC-Gmo-038606	Gadus morhua	77.70	0.00e+00	827.00
IUUC-Gga-040190	Gallus gallus	66.83	0.00e+00	660.00
IUUC-Gac-042206	Gasterosteus aculeatus	80.48	0.00e+00	830.00
IUUC-Lch-050653	Latimeria chalumnae	63.64	1.00e-178	619.00
IUUC-Ont-071794	Oreochromis niloticus	81.52	0.00e+00	907.00
IUUC-Ola-087113	Oryzias latipes	74.09	0.00e+00	801.00
IUUC-Pfo-097150	Poecilia formosa	79.45	0.00e+00	879.00
IUUC-Pgr-103678	Puccinia graminis	50.00	4.00e-09	54.30
IUUC-Tru-118554	Takifugu rubripes	80.52	0.00e+00	894.00
IUUC-Tni-120897	Tetraodon nigroviridis	80.17	0.00e+00	855.00
IUUC-Xtr-131901	Xenopus tropicalis	64.84	0.00e+00	655.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence