iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2674__AT1G26800.1	fgenesh2_kg.1__2674__AT1G26800.1	fgenesh2_kg.1__2674__AT1G26800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-06	29.1	113	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle+   ++ ++ +pC+H fh  C++kw         + +CP+Cr
   Q: 113  CVICLEEWksDEMVKEMPCKHRFHGGCIEKW------LGFHGSCPVCR 154
           ******8865555888***************......99999*****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MATEQEAEVG TETSSTSGRF LRNRDLYLFL PFLLGFSDQE PSNGDDDDVA SSRERIILVN 60
PFTQGMIVLE GSSGMNPLLR DILESREEGR PPASKASIDA MPIVQIDGYE GECVICLEEW 120

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Nucleotide Sequence
(Fasta)

CGTTAATAAT TTCTAGATCT TTCCGCAAGC AACTCTCTTA AATCTTGAAA CGCCAAGTTT 60
CCTTAGAGAA TCAAACAATT ATTTTGTTTT GAGATGGCGA CAGAACAAGA AGCTGAAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_472720

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004858	Anolis carolinensis	45.33	3.00e-15	76.30
IUUC-Ath-007018	Arabidopsis thaliana	92.16	3.00e-103	366.00
IUUC-Bdi-014161	Brachypodium distachyon	54.41	1.00e-18	85.50
IUUC-Bol-016120	Brassica oleracea	78.92	5.00e-83	299.00
IUUC-Bra-016818	Brassica rapa	82.50	1.00e-57	214.00
IUUC-Gga-040434	Gallus gallus	44.00	4.00e-16	79.30
IUUC-Gma-042932	Glycine max	58.54	4.00e-47	180.00
IUUC-Mtr-058137	Medicago truncatula	52.38	2.00e-28	118.00
IUUC-Olu-087770	Ostreococcus lucimarinus	44.00	4.00e-10	55.10
IUUC-Pop-099103	Populus trichocarpa	50.70	6.00e-52	196.00
IUUC-Ppe-101768	Prunus persica	48.97	8.00e-44	169.00
IUUC-Stu-112194	Solanum tuberosum	46.03	9.00e-39	152.00
IUUC-Tca-121463	Theobroma cacao	51.36	5.00e-55	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence