iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090711

UUCD1 version

UUC-PaT-00539

Ensembl Protein ID

ENSPTRP00000034249.2

UniProt Accession

H2QVR8; H2QVR8_PANTR

Genbank Protein ID

JAA04806.1; JAA25643.1

Protein Name

LON peptidase N-terminal domain and ring finger 1

Genbank Nucleotide ID

AACZ03063471; GABD01007457

Gene Name

LONRF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000020006.2	ENSPTRT00000037064.2	ENSPTRP00000034249.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-09	38.6	479	517
E3 activity/RING/U-box	1.60e-09	37.6	475	522

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH f+++Cl++          + +CPlC+
   Q: 479  CSLCMRLFFE-PVTTPCGHSFCKNCLERC------LDHAPYCPLCK 517
           **********.9**************999......9*********6 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+++ ++++e++l++    cP+++++l+e
   Q: 475  SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPY-CPLCKESLKE 522
           68***********************************9.*******986 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSSPAVARSS PGGSREMAPA PQGRGRFWEV GGGSGHRLER AAAESERWEL LLRRGELLAL 60
GGHLKGALEA FAAALRRGAP ARPECLGALV DCLVFNYRLR HGLGWSAAPV AGADGGVGGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGCGCCCG GGAGGCTCCG GGACCGTGGC GGCGGGCGGC GGCGGCGCAG CCCTCCGCGG 60
GCCATGTCCT CTCCGGCGGT GGCGAGGAGC TCCCCAGGAG GGAGTCGGGA GATGGCCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

ptr:464000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	92.11	0.00e+00	997.00
IUUC-Atr-002972	Amborella trichopoda	40.00	8.00e-43	167.00
IUUC-Apl-003309	Anas platyrhynchos	79.71	0.00e+00	650.00
IUUC-Aca-004288	Anolis carolinensis	64.02	0.00e+00	857.00
IUUC-Aly-005476	Arabidopsis lyrata	36.99	2.00e-40	160.00
IUUC-Ath-006654	Arabidopsis thaliana	37.40	5.00e-41	161.00
IUUC-Ang-009643	Aspergillus niger	29.81	2.00e-39	157.00
IUUC-Ame-010716	Astyanax mexicanus	51.03	0.00e+00	642.00
IUUC-Bta-012903	Bos taurus	87.65	0.00e+00	1070.00
IUUC-Bdi-014333	Brachypodium distachyon	41.71	2.00e-42	166.00
IUUC-Bol-016150	Brassica oleracea	34.62	5.00e-41	161.00
IUUC-Bra-016716	Brassica rapa	33.21	3.00e-38	152.00
IUUC-Cja-019312	Callithrix jacchus	98.29	0.00e+00	1238.00
IUUC-Cfa-020159	Canis familiaris	92.19	0.00e+00	1136.00
IUUC-Cpo-022528	Cavia porcellus	92.09	0.00e+00	972.00
IUUC-Csa-023361	Chlorocebus sabaeus	98.45	0.00e+00	1187.00
IUUC-Cho-024549	Choloepus hoffmanni	83.65	0.00e+00	843.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	31.38	2.00e-45	176.00
IUUC-Cme-027153	Cyanidioschyzon merolae	30.35	2.00e-29	123.00
IUUC-Dre-028195	Danio rerio	49.45	0.00e+00	641.00
IUUC-Dno-029284	Dasypus novemcinctus	91.35	0.00e+00	1004.00
IUUC-Dor-031123	Dipodomys ordii	80.75	0.00e+00	723.00
IUUC-Dme-031919	Drosophila melanogaster	36.95	4.00e-65	243.00
IUUC-Ete-032455	Echinops telfairi	91.32	0.00e+00	770.00
IUUC-Eca-033248	Equus caballus	95.49	0.00e+00	776.00
IUUC-Eeu-034441	Erinaceus europaeus	92.55	0.00e+00	807.00
IUUC-Fca-035551	Felis catus	92.48	0.00e+00	1021.00
IUUC-Fal-036731	Ficedula albicollis	75.95	0.00e+00	822.00
IUUC-Gmo-039315	Gadus morhua	44.70	3.00e-159	555.00
IUUC-Gga-040888	Gallus gallus	79.81	0.00e+00	684.00
IUUC-Gac-042121	Gasterosteus aculeatus	50.27	0.00e+00	634.00
IUUC-Ggo-044985	Gorilla gorilla	98.43	0.00e+00	1113.00
IUUC-Hsa-046592	Homo sapiens	99.61	0.00e+00	1281.00
IUUC-Hvu-047145	Hordeum vulgare	40.65	1.00e-24	106.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	93.85	0.00e+00	1077.00
IUUC-Lch-050404	Latimeria chalumnae	56.83	0.00e+00	741.00
IUUC-Laf-053431	Loxodonta africana	91.17	0.00e+00	999.00
IUUC-Mcc-055751	Macaca mulatta	97.08	0.00e+00	1073.00
IUUC-Mor-056963	Magnaporthe oryzae	41.71	2.00e-41	163.00
IUUC-Mla-058946	Melampsora laricipopulina	34.45	8.00e-46	177.00
IUUC-Mvi-060228	Microbotryum violaceum	33.98	9.00e-47	182.00
IUUC-Mmr-061283	Microcebus murinus	95.08	0.00e+00	1205.00
IUUC-Mmu-063169	Mus musculus	87.17	0.00e+00	1059.00
IUUC-Mac-065566	Musa acuminata	37.66	2.00e-43	170.00
IUUC-Mpu-066537	Mustela putorius furo	91.85	0.00e+00	1188.00
IUUC-Mlu-067497	Myotis lucifugus	92.11	0.00e+00	1016.00
IUUC-Nle-068971	Nomascus leucogenys	99.25	0.00e+00	1038.00
IUUC-Opr-070791	Ochotona princeps	93.08	0.00e+00	914.00
IUUC-Ont-071548	Oreochromis niloticus	48.97	0.00e+00	643.00
IUUC-Oan-072747	Ornithorhynchus anatinus	85.32	0.00e+00	718.00
IUUC-Ocu-074928	Oryctolagus cuniculus	95.99	0.00e+00	798.00
IUUC-Oba-075239	Oryza barthii	40.67	4.00e-42	165.00
IUUC-Obr-076158	Oryza brachyantha	40.62	3.00e-44	173.00
IUUC-Ogu-078154	Oryza glumaepatula	41.15	1.00e-42	168.00
IUUC-Oin-079067	Oryza indica	38.33	1.00e-42	167.00
IUUC-Olo-080663	Oryza longistaminata	40.67	5.00e-42	165.00
IUUC-Oni-082119	Oryza nivara	35.45	2.00e-42	166.00
IUUC-Opu-083266	Oryza punctata	42.11	4.00e-31	129.00
IUUC-Oru-085190	Oryza rufipogon	40.67	6.00e-42	165.00
IUUC-Ola-086977	Oryzias latipes	52.05	0.00e+00	652.00
IUUC-Oga-088719	Otolemur garnettii	88.76	0.00e+00	1195.00
IUUC-Oar-089577	Ovis aries	92.48	0.00e+00	1025.00
IUUC-Pan-092587	Papio anubis	98.32	0.00e+00	1232.00
IUUC-Psi-093128	Pelodiscus sinensis	74.22	0.00e+00	851.00
IUUC-Pfo-096474	Poecilia formosa	50.56	0.00e+00	648.00
IUUC-Pab-097800	Pongo abelii	98.02	0.00e+00	1219.00
IUUC-Pop-100044	Populus trichocarpa	34.03	3.00e-43	169.00
IUUC-Pte-104214	Pyrenophora teres	30.15	7.00e-39	155.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	30.15	6.00e-39	155.00
IUUC-Rno-105718	Rattus norvegicus	85.57	0.00e+00	1017.00
IUUC-Sit-110495	Setaria italica	38.67	8.00e-42	165.00
IUUC-Sly-111396	Solanum lycopersicum	33.90	6.00e-42	164.00
IUUC-Sar-113220	Sorex araneus	89.90	0.00e+00	736.00
IUUC-Sbi-114779	Sorghum bicolor	37.50	8.00e-29	121.00
IUUC-Sre-114977	Sporisorium reilianum	32.20	2.00e-35	144.00
IUUC-Ssc-115733	Sus scrofa	90.04	0.00e+00	1170.00
IUUC-Tgu-117431	Taeniopygia guttata	70.25	0.00e+00	851.00
IUUC-Tru-118274	Takifugu rubripes	50.70	0.00e+00	633.00
IUUC-Tsy-119043	Tarsius syrichta	95.30	0.00e+00	1019.00
IUUC-Tni-120766	Tetraodon nigroviridis	49.85	3.00e-167	581.00
IUUC-Tca-121632	Theobroma cacao	31.42	1.00e-43	171.00
IUUC-Tae-125900	Triticum aestivum	34.38	6.00e-45	175.00
IUUC-Tur-126297	Triticum urartu	40.74	4.00e-32	132.00
IUUC-Tme-127112	Tuber melanosporum	37.35	8.00e-47	181.00
IUUC-Tbe-127284	Tupaia belangeri	91.35	0.00e+00	782.00
IUUC-Vda-129721	Verticillium dahliae	27.56	6.00e-36	145.00
IUUC-Vpa-130408	Vicugna pacos	84.77	0.00e+00	890.00
IUUC-Xtr-132417	Xenopus tropicalis	57.41	0.00e+00	731.00
IUUC-Xma-134099	Xiphophorus maculatus	50.14	0.00e+00	643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence