iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115811

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU407060

Gene Name

PDLIM2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000009625.2	ENSSSCT00000010551.2	ENSSSCP00000010275.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	80.78	2.00e-124	442.00	IUUC-Hsa-045868
E3 activity/Other	74.37	3.00e-118	422.00	IUUC-Mmu-063244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MALTVDVVGP APWGFRISGG RDFHMPITVT KVTERGKAEA ADLRPGDIIV AINGESAKGM 60
LHAEAQSKIR QSPSPLRLQL DRSRAASPGQ TNGESSMEVL ATRFQGSRRG HTDSQSSLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGA CAGTGGATGT GGTGGGGCCG GCGCCCTGGG GCTTCCGCAT CTCCGGAGGC 60
AGGGATTTCC ACATGCCTAT CACAGTGACC AAGGTAAGTG CTAGTTCCAG GAGATCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR031847--DUF4749
IPR001478--PDZ
IPR001781--Znf_LIM

PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50106--PDZ

Pfam

PF15936--DUF4749
PF00412--LIM
PF00595--PDZ

SMART

SM00132--LIM
SM00228--PDZ

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001484	Ailuropoda melanoleuca	79.38	2.00e-135	474.00
IUUC-Aca-004512	Anolis carolinensis	52.92	4.00e-84	304.00
IUUC-Ame-011626	Astyanax mexicanus	58.10	5.00e-31	128.00
IUUC-Bta-012510	Bos taurus	85.79	4.00e-143	500.00
IUUC-Bdi-014056	Brachypodium distachyon	30.65	1.00e-01	31.60
IUUC-Cja-019248	Callithrix jacchus	81.34	1.00e-127	449.00
IUUC-Cfa-020352	Canis familiaris	80.78	4.00e-137	480.00
IUUC-Cpo-021995	Cavia porcellus	71.27	1.00e-111	395.00
IUUC-Csa-024190	Chlorocebus sabaeus	77.16	2.00e-125	441.00
IUUC-Dre-027418	Danio rerio	55.24	8.00e-27	114.00
IUUC-Dor-030439	Dipodomys ordii	60.67	4.00e-60	224.00
IUUC-Dme-031753	Drosophila melanogaster	45.59	8.00e-13	67.80
IUUC-Eca-034183	Equus caballus	81.89	1.00e-130	458.00
IUUC-Eeu-034958	Erinaceus europaeus	73.00	3.00e-90	324.00
IUUC-Fca-035680	Felis catus	82.17	6.00e-139	486.00
IUUC-Gmo-038558	Gadus morhua	56.30	2.00e-41	162.00
IUUC-Gac-041738	Gasterosteus aculeatus	44.17	1.00e-70	259.00
IUUC-Ggo-044609	Gorilla gorilla	80.78	3.00e-125	441.00
IUUC-Hsa-045868	Homo sapiens	76.60	9.00e-122	430.00
IUUC-Itr-048876	Ictidomys tridecemlineatus	83.01	2.00e-130	458.00
IUUC-Loc-052212	Lepisosteus oculatus	47.21	2.00e-77	282.00
IUUC-Laf-053824	Loxodonta africana	82.17	9.00e-129	452.00
IUUC-Mcc-054962	Macaca mulatta	77.16	2.00e-125	441.00
IUUC-Meu-056007	Macropus eugenii	75.26	8.00e-41	161.00
IUUC-Mmr-060607	Microcebus murinus	82.45	3.00e-126	444.00
IUUC-Mdo-062935	Monodelphis domestica	74.26	4.00e-55	207.00
IUUC-Mmu-063244	Mus musculus	75.21	3.00e-120	424.00
IUUC-Mpu-065888	Mustela putorius furo	82.07	1.00e-124	439.00
IUUC-Mlu-067124	Myotis lucifugus	84.40	2.00e-147	514.00
IUUC-Nle-069063	Nomascus leucogenys	74.09	5.00e-88	317.00
IUUC-Opr-071221	Ochotona princeps	74.24	2.00e-105	375.00
IUUC-Ont-072000	Oreochromis niloticus	43.70	1.00e-70	259.00
IUUC-Oan-073012	Ornithorhynchus anatinus	57.85	2.00e-83	302.00
IUUC-Ocu-074376	Oryctolagus cuniculus	76.04	6.00e-114	403.00
IUUC-Ola-086915	Oryzias latipes	43.25	3.00e-70	258.00
IUUC-Oga-088393	Otolemur garnettii	83.57	4.00e-134	470.00
IUUC-Oar-089421	Ovis aries	84.68	8.00e-149	519.00
IUUC-Ptr-091089	Pan troglodytes	76.05	3.00e-110	391.00
IUUC-Pan-092163	Papio anubis	76.88	2.00e-119	421.00
IUUC-Psi-093043	Pelodiscus sinensis	46.31	1.00e-68	252.00
IUUC-Pfo-096885	Poecilia formosa	59.06	2.00e-41	162.00
IUUC-Pab-097988	Pongo abelii	76.05	5.00e-110	390.00
IUUC-Pop-100076	Populus trichocarpa	22.08	5.70e-02	32.00
IUUC-Pca-100131	Procavia capensis	82.82	6.00e-124	437.00
IUUC-Pva-102706	Pteropus vampyrus	75.49	8.00e-120	423.00
IUUC-Rno-104992	Rattus norvegicus	74.65	5.00e-122	430.00
IUUC-Sha-107463	Sarcophilus harrisii	64.73	2.00e-68	251.00
IUUC-Sar-113038	Sorex araneus	42.86	1.00e-18	88.20
IUUC-Tbe-127240	Tupaia belangeri	65.71	8.00e-75	273.00
IUUC-Ttr-128236	Tursiops truncatus	69.08	1.00e-108	385.00
IUUC-Vpa-130569	Vicugna pacos	63.79	1.00e-97	349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence