iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105001

Ensembl Protein ID

ENSRNOP00000028091.6

UniProt Accession

A0A0H2UHS4; A0A0H2UHS4_RAT

Genbank Protein ID

ENSRNOP00000028091

Protein Name

Zinc finger protein neuro-d4

Genbank Nucleotide ID

AABR07002856

Gene Name

Dpf1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000020687.8	ENSRNOT00000028091.8	ENSRNOP00000028091.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	miRNAMap	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.20e-13	49.4	327	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C +Cg +++d+ +l+ C++C++ +H  Cl+++   e p+ + w C  C 
   Q: 327  SCSLCGTSENDD-QLLFCDDCDRGYHMYCLSPP-MAEPPEGS-WSCHLCL 373
           7********987.7*******************.77777776.******5 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MATVIPSPLS LGEDFYREAI EHCRSYNARL CAERSLRLPF LDSQTGVAQN NCYIWMEKTH 60
RGPGLAPGQI YTYPARCWRK KRRLNILEDP RLRPCEYKID CEAPLKKEGG LPEGPVLEAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCTCAGCG CCCGCCCGAC CGCTGGGAGG ACCGACCCGG CAGGGACCTG CTGGGGGCAG 60
GACCCGGGGA GCAAGATGGC CACGGTCATC CCCAGCCCCC TGAGGTGGTG CGGGCGTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025750--Requiem/DPF_N_dom
IPR013087--Znf_C2H2_type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00628--PHD
PF14051--Requiem_N

SMART

SM00249--PHD
SM00355--ZnF_C2H2

Gene Ontology

GO:0071565--C:nBAF complex
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0007399--P:nervous system development

KEGG

rno:50545

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001316	Ailuropoda melanoleuca	98.45	0.00e+00	739.00
IUUC-Apl-003424	Anas platyrhynchos	66.05	6.00e-128	450.00
IUUC-Aca-004761	Anolis carolinensis	86.34	0.00e+00	631.00
IUUC-Ame-011556	Astyanax mexicanus	80.40	1.00e-161	562.00
IUUC-Bta-013085	Bos taurus	93.56	0.00e+00	723.00
IUUC-Cel-018182	Caenorhabditis elegans	29.90	1.00e-42	166.00
IUUC-Cja-020005	Callithrix jacchus	92.38	1.00e-162	565.00
IUUC-Cpo-021668	Cavia porcellus	91.47	0.00e+00	665.00
IUUC-Csa-024238	Chlorocebus sabaeus	95.97	0.00e+00	730.00
IUUC-Cin-025528	Ciona intestinalis	38.59	9.00e-74	270.00
IUUC-Dre-027738	Danio rerio	79.90	3.00e-180	624.00
IUUC-Dno-029041	Dasypus novemcinctus	98.67	0.00e+00	717.00
IUUC-Ete-032515	Echinops telfairi	92.27	0.00e+00	660.00
IUUC-Eca-034251	Equus caballus	67.01	1.00e-131	462.00
IUUC-Fca-035543	Felis catus	98.45	0.00e+00	739.00
IUUC-Fal-036898	Ficedula albicollis	64.96	2.00e-128	451.00
IUUC-Gmo-039263	Gadus morhua	57.76	5.00e-118	417.00
IUUC-Gga-041265	Gallus gallus	57.05	4.00e-121	427.00
IUUC-Gac-042351	Gasterosteus aculeatus	79.38	3.00e-174	604.00
IUUC-Ggo-044774	Gorilla gorilla	97.93	0.00e+00	729.00
IUUC-Hsa-046404	Homo sapiens	98.45	0.00e+00	738.00
IUUC-Itr-048666	Ictidomys tridecemlineatus	96.73	0.00e+00	734.00
IUUC-Lch-049484	Latimeria chalumnae	79.04	2.00e-134	471.00
IUUC-Loc-052898	Lepisosteus oculatus	76.50	2.00e-167	581.00
IUUC-Laf-053772	Loxodonta africana	58.33	3.00e-124	438.00
IUUC-Mcc-055662	Macaca mulatta	95.90	0.00e+00	716.00
IUUC-Meu-056874	Macropus eugenii	81.40	8.00e-168	582.00
IUUC-Mga-059248	Meleagris gallopavo	56.16	1.00e-116	413.00
IUUC-Mmr-061293	Microcebus murinus	98.68	0.00e+00	721.00
IUUC-Mdo-061983	Monodelphis domestica	66.06	2.00e-129	455.00
IUUC-Mmu-064024	Mus musculus	95.98	0.00e+00	724.00
IUUC-Mpu-066648	Mustela putorius furo	98.45	0.00e+00	739.00
IUUC-Mlu-067198	Myotis lucifugus	69.29	6.00e-131	460.00
IUUC-Nle-069746	Nomascus leucogenys	92.31	0.00e+00	679.00
IUUC-Ont-072320	Oreochromis niloticus	77.64	2.00e-176	611.00
IUUC-Ola-086430	Oryzias latipes	78.83	5.00e-172	597.00
IUUC-Oga-088070	Otolemur garnettii	95.97	0.00e+00	730.00
IUUC-Oar-090336	Ovis aries	88.19	0.00e+00	662.00
IUUC-Ptr-091481	Pan troglodytes	98.05	9.00e-165	572.00
IUUC-Pan-092328	Papio anubis	98.45	0.00e+00	738.00
IUUC-Psi-093080	Pelodiscus sinensis	65.32	2.00e-128	451.00
IUUC-Pfo-096233	Poecilia formosa	77.89	5.00e-177	613.00
IUUC-Pab-098560	Pongo abelii	98.45	0.00e+00	738.00
IUUC-Pca-100612	Procavia capensis	92.59	2.00e-70	259.00
IUUC-Ssc-115701	Sus scrofa	98.17	0.00e+00	724.00
IUUC-Tgu-117306	Taeniopygia guttata	65.98	6.00e-130	456.00
IUUC-Tru-118192	Takifugu rubripes	55.51	2.00e-120	426.00
IUUC-Tni-120860	Tetraodon nigroviridis	76.86	1.00e-168	585.00
IUUC-Ttr-128890	Tursiops truncatus	82.37	0.00e+00	633.00
IUUC-Xtr-131925	Xenopus tropicalis	85.49	0.00e+00	654.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence