iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118224

Ensembl Protein ID

ENSTRUP00000004856.1

UniProt Accession

H2RXI6; H2RXI6_TAKRU

Protein Name

Uncharacterized protein

Gene Name

psmd4b; LOC101067241

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000002109.1	ENSTRUT00000004885.1	ENSTRUP00000004856.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	2.20e-07	31.3	296	314
UBD/Alpha-Helix/UIM	0.00011	13.9	227	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEeee 19
           +Ede+++ Al++S+q e+e
   Q: 296  TEDEQIAYALQMSMQGEGE 314
           59*************9975 PP

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEeees 20
           d+eL+lAl++S++E++++
   Q: 227  DPELALALRVSMEEQRQR 244
           99*************985 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

RSKRRSNETK EIDGKMVLES TVVCVDNSEY MRNGDFLPRL QAQQDAVNIV CHSKTRSNPE 60
NNVGLITMAN NCEVLTTLTP DTARILSKLH AVQPCGNISF CTGIRVAHLA LKHRQGKNHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATCTAAAA GAAGAAGCAA TGAGACCAAG GGGAGAAGAA ACAGACAGTT TAAAATATTG 60
TCTTTTATAA CAAAACAACA AGAATAATGT TACAAAGCTT CCATACCTGC AGCCCAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM
PS50234--VWFA

Pfam

PF02809--UIM
PF13519--VWA_2

SMART

SM00726--UIM
SM00327--VWA

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0031593--F:polyubiquitin binding
GO:0043248--P:proteasome assembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002938	Amborella trichopoda	42.65	6.00e-63	234.00
IUUC-Aca-004397	Anolis carolinensis	84.27	1.00e-112	399.00
IUUC-Aly-005564	Arabidopsis lyrata	40.72	6.00e-52	197.00
IUUC-Acl-008094	Aspergillus clavatus	44.16	6.00e-36	144.00
IUUC-Afl-008689	Aspergillus flavus	45.45	3.00e-36	145.00
IUUC-Afu-008959	Aspergillus fumigatus	45.41	3.00e-36	145.00
IUUC-Ani-009344	Aspergillus nidulans	43.01	3.00e-24	105.00
IUUC-Ang-009602	Aspergillus niger	45.45	1.00e-34	140.00
IUUC-Bdi-014537	Brachypodium distachyon	39.00	9.00e-57	214.00
IUUC-Bol-015474	Brassica oleracea	50.00	3.00e-49	189.00
IUUC-Bra-018039	Brassica rapa	50.00	1.00e-49	189.00
IUUC-Cel-018187	Caenorhabditis elegans	45.04	4.00e-63	234.00
IUUC-Cre-022783	Chlamydomonas reinhardtii	47.90	5.00e-43	167.00
IUUC-Dme-032000	Drosophila melanogaster	64.89	1.00e-82	299.00
IUUC-Gma-044042	Glycine max	50.87	3.00e-55	209.00
IUUC-Hvu-047715	Hordeum vulgare	49.58	9.00e-51	194.00
IUUC-Lpe-051233	Leersia perrieri	47.03	2.00e-45	177.00
IUUC-Lma-053295	Leptosphaeria maculans	50.00	5.00e-45	174.00
IUUC-Mtr-058520	Medicago truncatula	39.27	5.00e-55	207.00
IUUC-Mla-059105	Melampsora laricipopulina	46.06	3.00e-16	79.30
IUUC-Mac-065456	Musa acuminata	39.56	2.00e-59	223.00
IUUC-Ont-072030	Oreochromis niloticus	90.36	8.00e-174	602.00
IUUC-Oba-075955	Oryza barthii	47.03	3.00e-46	179.00
IUUC-Obr-076545	Oryza brachyantha	46.61	5.00e-45	175.00
IUUC-Ogu-078986	Oryza glumaepatula	47.03	4.00e-46	178.00
IUUC-Ome-082015	Oryza meridionalis	47.03	2.00e-46	179.00
IUUC-Oni-082397	Oryza nivara	47.03	3.00e-46	179.00
IUUC-Opu-083674	Oryza punctata	47.03	2.00e-46	179.00
IUUC-Oru-085199	Oryza rufipogon	47.03	3.00e-46	179.00
IUUC-Osa-085911	Oryza sativa	47.03	3.00e-46	179.00
IUUC-Olu-087857	Ostreococcus lucimarinus	47.62	4.00e-43	167.00
IUUC-Ppa-095749	Physcomitrella patens	47.93	1.00e-50	194.00
IUUC-Pfo-096593	Poecilia formosa	87.53	3.00e-168	584.00
IUUC-Pop-099138	Populus trichocarpa	40.94	1.00e-63	236.00
IUUC-Ppe-101877	Prunus persica	39.01	2.00e-67	249.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	48.12	2.00e-49	189.00
IUUC-Sce-106427	Saccharomyces cerevisiae	48.73	3.00e-53	201.00
IUUC-Smo-109108	Selaginella moellendorffii	38.44	1.00e-61	230.00
IUUC-Sit-110284	Setaria italica	49.15	1.00e-46	180.00
IUUC-Sly-111246	Solanum lycopersicum	37.06	2.00e-60	226.00
IUUC-Stu-112695	Solanum tuberosum	37.06	1.00e-60	226.00
IUUC-Sbi-114495	Sorghum bicolor	49.15	8.00e-47	181.00
IUUC-Sre-114891	Sporisorium reilianum	53.02	9.00e-57	213.00
IUUC-Tca-121251	Theobroma cacao	40.44	2.00e-54	206.00
IUUC-Tae-125631	Triticum aestivum	49.58	2.00e-50	192.00
IUUC-Tur-126420	Triticum urartu	49.58	1.00e-50	193.00
IUUC-Uma-129436	Ustilago maydis	53.02	2.00e-57	216.00
IUUC-Vpa-130762	Vicugna pacos	91.82	5.00e-58	218.00
IUUC-Vvi-130840	Vitis vinifera	49.37	1.00e-52	200.00
IUUC-Xma-133989	Xiphophorus maculatus	88.95	6.00e-170	590.00
IUUC-Yli-134643	Yarrowia lipolytica	50.64	3.00e-51	195.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence