iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-087995

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03133692

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000001083.2	ENSOGAT00000001083.2	ENSOGAP00000000967.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-09	35.9	26	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.............pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +              g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqeqasnpylptrGGTTVASGGRFRCPSCR 84
           *************************744445557888899998888889*********8 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MSASLNYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQEQAS 60
NPYLPTRGGT TVASGGRFRC PSCRHEVVLD RHGVYGLQRN LLVENIIDIY KQESTRPEKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGCAT CTTTGAATTA CAAGTCTTTT TCCAAAGAGC AACAGACTAT GGATAACTTG 60
GAGAAACAAC TCATCTGTCC CATCTGCCTA GAGATGTTCA CAAAACCTGT GGTCATTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	90.55	0.00e+00	885.00
IUUC-Apl-003341	Anas platyrhynchos	89.94	0.00e+00	639.00
IUUC-Aca-005384	Anolis carolinensis	84.69	8.00e-167	580.00
IUUC-Ame-010720	Astyanax mexicanus	71.20	3.00e-137	481.00
IUUC-Bta-013040	Bos taurus	85.82	0.00e+00	834.00
IUUC-Cja-019932	Callithrix jacchus	90.36	0.00e+00	855.00
IUUC-Cfa-020450	Canis familiaris	89.67	0.00e+00	907.00
IUUC-Cpo-021767	Cavia porcellus	85.79	0.00e+00	865.00
IUUC-Csa-023600	Chlorocebus sabaeus	89.49	0.00e+00	862.00
IUUC-Cho-024753	Choloepus hoffmanni	74.95	0.00e+00	697.00
IUUC-Dre-028701	Danio rerio	69.94	8.00e-135	473.00
IUUC-Dno-030008	Dasypus novemcinctus	87.16	0.00e+00	858.00
IUUC-Ete-032274	Echinops telfairi	79.27	0.00e+00	760.00
IUUC-Eca-034326	Equus caballus	88.75	0.00e+00	835.00
IUUC-Fca-035385	Felis catus	90.65	0.00e+00	829.00
IUUC-Fal-036679	Ficedula albicollis	88.01	3.00e-174	604.00
IUUC-Gmo-039021	Gadus morhua	63.52	1.00e-116	412.00
IUUC-Gga-040576	Gallus gallus	87.70	1.00e-171	595.00
IUUC-Gac-042165	Gasterosteus aculeatus	65.24	6.00e-130	456.00
IUUC-Ggo-044496	Gorilla gorilla	89.49	0.00e+00	848.00
IUUC-Hsa-046337	Homo sapiens	89.86	0.00e+00	847.00
IUUC-Lch-050504	Latimeria chalumnae	80.55	3.00e-165	575.00
IUUC-Loc-052717	Lepisosteus oculatus	56.86	3.00e-156	545.00
IUUC-Laf-053838	Loxodonta africana	79.60	0.00e+00	808.00
IUUC-Mcc-054690	Macaca mulatta	89.13	0.00e+00	839.00
IUUC-Meu-056782	Macropus eugenii	80.55	4.00e-159	554.00
IUUC-Mga-060112	Meleagris gallopavo	88.33	6.00e-175	607.00
IUUC-Mmr-061229	Microcebus murinus	90.35	0.00e+00	905.00
IUUC-Mdo-062397	Monodelphis domestica	92.40	0.00e+00	627.00
IUUC-Mmu-063764	Mus musculus	83.79	0.00e+00	818.00
IUUC-Mpu-066503	Mustela putorius furo	90.35	0.00e+00	868.00
IUUC-Mlu-068160	Myotis lucifugus	97.67	1.00e-100	358.00
IUUC-Nle-069170	Nomascus leucogenys	89.29	0.00e+00	868.00
IUUC-Ont-072082	Oreochromis niloticus	67.09	7.00e-130	456.00
IUUC-Oan-072715	Ornithorhynchus anatinus	92.65	7.00e-180	623.00
IUUC-Ocu-074747	Oryctolagus cuniculus	86.89	0.00e+00	781.00
IUUC-Ola-086646	Oryzias latipes	63.80	9.00e-126	443.00
IUUC-Oar-089844	Ovis aries	85.82	0.00e+00	847.00
IUUC-Ptr-091556	Pan troglodytes	89.86	0.00e+00	848.00
IUUC-Pan-092224	Papio anubis	89.49	0.00e+00	843.00
IUUC-Psi-093856	Pelodiscus sinensis	71.09	0.00e+00	720.00
IUUC-Pma-094534	Petromyzon marinus	55.08	2.00e-99	355.00
IUUC-Pfo-096596	Poecilia formosa	60.65	1.00e-126	445.00
IUUC-Pca-100510	Procavia capensis	81.42	0.00e+00	810.00
IUUC-Pva-102962	Pteropus vampyrus	87.50	0.00e+00	793.00
IUUC-Rno-105696	Rattus norvegicus	82.70	0.00e+00	781.00
IUUC-Sha-106825	Sarcophilus harrisii	74.50	0.00e+00	728.00
IUUC-Sar-113763	Sorex araneus	80.80	6.00e-112	397.00
IUUC-Ssc-116332	Sus scrofa	96.96	0.00e+00	671.00
IUUC-Tgu-117208	Taeniopygia guttata	87.70	2.00e-174	605.00
IUUC-Tru-118744	Takifugu rubripes	64.24	2.00e-128	452.00
IUUC-Tsy-119352	Tarsius syrichta	84.38	0.00e+00	857.00
IUUC-Tni-120413	Tetraodon nigroviridis	66.35	6.00e-127	446.00
IUUC-Tbe-127821	Tupaia belangeri	96.55	1.00e-118	420.00
IUUC-Ttr-128545	Tursiops truncatus	85.61	0.00e+00	785.00
IUUC-Vpa-130699	Vicugna pacos	96.05	0.00e+00	667.00
IUUC-Xtr-132207	Xenopus tropicalis	62.08	3.00e-179	620.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence