iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-045084

Ensembl Protein ID

ENSGGOP00000025720.1

UniProt Accession

G3SC93; G3SC93_GORGO

Protein Name

Uncharacterized protein

Gene Name

RAD23A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000023403.1	ENSGGOT00000034603.1	ENSGGOP00000025720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	9.90e-21	73.6	179	218
ULD/UDP/UBQ/UBQ_PIM	5.30e-26	90.8	20	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 179  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 218
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t+ktl++++f++++++d+tv+ lKeki++e+g   +p++ qkLIyaGkiL+Dd +++++ i+++++v+++v+k+k
   Q: 20   VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGrdaFPVAGQKLIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTK 97
           68*************************************************************************987 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

VACCVRIPGP PRRSGPAMAV TITLKTLQQQ TFKIRMEPDE TVKVLKEKIE AEKGRDAFPV 60
AGQKLIYAGK ILSDDVPIRD YRIDEKNFVV VMVTKTKAGQ GTSAPPEASP TAAPESSTSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTAAGATG GCGGCGGCGT GAGTTGCATG TTGTGTGAGG ATCCCGGGGC CGCCGCGTCG 60
CTCGGGCCCC GCCATGGCCG TCACCATCAC GCTCAAAACG CTGCAGCAGC AGACCTTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.11	2.00e-32	133.00
IUUC-Aml-001515	Ailuropoda melanoleuca	91.84	5.00e-154	536.00
IUUC-Atr-002756	Amborella trichopoda	35.31	1.00e-49	190.00
IUUC-Aca-004704	Anolis carolinensis	79.62	5.00e-113	400.00
IUUC-Ani-009460	Aspergillus nidulans	38.80	4.00e-29	121.00
IUUC-Bgr-012056	Blumeria graminis	34.63	1.00e-21	97.10
IUUC-Bta-012377	Bos taurus	96.14	3.00e-148	517.00
IUUC-Bci-013933	Botrytis cinerea	37.31	6.00e-21	94.70
IUUC-Bdi-014718	Brachypodium distachyon	30.60	1.00e-40	160.00
IUUC-Cel-018364	Caenorhabditis elegans	31.98	1.00e-28	119.00
IUUC-Cja-018946	Callithrix jacchus	98.42	7.00e-159	553.00
IUUC-Cfa-020577	Canis familiaris	97.25	8.00e-155	539.00
IUUC-Cpo-021850	Cavia porcellus	92.37	5.00e-175	606.00
IUUC-Csa-023183	Chlorocebus sabaeus	99.72	2.00e-156	545.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	33.50	1.00e-21	97.40
IUUC-Dno-030017	Dasypus novemcinctus	92.37	1.00e-129	455.00
IUUC-Dor-030358	Dipodomys ordii	84.62	3.00e-126	444.00
IUUC-Eca-033599	Equus caballus	93.51	6.00e-138	483.00
IUUC-Fca-036051	Felis catus	96.42	9.00e-153	532.00
IUUC-Gmo-038528	Gadus morhua	58.29	4.00e-89	321.00
IUUC-Gga-040133	Gallus gallus	86.98	1.00e-74	273.00
IUUC-Gma-044077	Glycine max	34.95	7.00e-46	177.00
IUUC-Hsa-046614	Homo sapiens	100.00	2.00e-157	548.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	97.37	0.00e+00	642.00
IUUC-Lch-050563	Latimeria chalumnae	62.56	2.00e-104	372.00
IUUC-Lpe-051087	Leersia perrieri	39.11	4.00e-34	138.00
IUUC-Laf-054589	Loxodonta africana	96.97	7.00e-147	513.00
IUUC-Mcc-055860	Macaca mulatta	99.72	2.00e-156	545.00
IUUC-Meu-056459	Macropus eugenii	93.95	7.00e-105	373.00
IUUC-Mmr-060819	Microcebus murinus	97.25	3.00e-167	581.00
IUUC-Mdo-062742	Monodelphis domestica	85.75	8.00e-147	513.00
IUUC-Mmu-063929	Mus musculus	94.77	5.00e-164	570.00
IUUC-Mac-065180	Musa acuminata	34.35	6.00e-44	171.00
IUUC-Mpu-066684	Mustela putorius furo	97.25	1.00e-157	548.00
IUUC-Mlu-067787	Myotis lucifugus	95.04	7.00e-152	530.00
IUUC-Nle-069846	Nomascus leucogenys	88.28	2.00e-135	474.00
IUUC-Ont-072271	Oreochromis niloticus	56.46	9.00e-89	320.00
IUUC-Oan-073572	Ornithorhynchus anatinus	80.17	1.00e-131	462.00
IUUC-Ocu-074968	Oryctolagus cuniculus	96.02	2.00e-105	376.00
IUUC-Oba-075392	Oryza barthii	38.71	5.00e-32	132.00
IUUC-Obr-076660	Oryza brachyantha	34.78	2.00e-45	176.00
IUUC-Ogu-078883	Oryza glumaepatula	38.71	4.00e-32	132.00
IUUC-Oin-079817	Oryza indica	38.71	6.00e-32	131.00
IUUC-Olo-080929	Oryza longistaminata	38.71	4.00e-32	132.00
IUUC-Ome-081866	Oryza meridionalis	38.71	4.00e-32	132.00
IUUC-Oni-083092	Oryza nivara	38.71	6.00e-32	131.00
IUUC-Opu-083756	Oryza punctata	39.44	9.00e-34	137.00
IUUC-Oru-084816	Oryza rufipogon	38.71	6.00e-32	131.00
IUUC-Osa-086112	Oryza sativa	38.71	6.00e-32	131.00
IUUC-Oga-089075	Otolemur garnettii	96.32	5.00e-159	553.00
IUUC-Oar-090387	Ovis aries	95.26	3.00e-154	538.00
IUUC-Ptr-090912	Pan troglodytes	96.42	2.00e-146	511.00
IUUC-Pan-092140	Papio anubis	99.47	6.00e-167	579.00
IUUC-Psi-093347	Pelodiscus sinensis	67.18	5.00e-68	251.00
IUUC-Pno-095064	Phaeosphaeria nodorum	36.82	4.00e-18	85.50
IUUC-Ppa-095654	Physcomitrella patens	40.41	3.00e-35	142.00
IUUC-Pfo-096607	Poecilia formosa	64.29	3.00e-95	342.00
IUUC-Pab-097738	Pongo abelii	96.14	1.00e-150	525.00
IUUC-Pca-100348	Procavia capensis	93.96	5.00e-145	506.00
IUUC-Ppe-101522	Prunus persica	34.49	5.00e-50	191.00
IUUC-Pva-102412	Pteropus vampyrus	96.97	4.00e-156	543.00
IUUC-Pgr-103618	Puccinia graminis	37.31	8.00e-25	107.00
IUUC-Rno-105569	Rattus norvegicus	95.04	2.00e-150	525.00
IUUC-Sha-106918	Sarcophilus harrisii	86.30	2.00e-130	459.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	36.06	5.00e-44	171.00
IUUC-Smo-109129	Selaginella moellendorffii	38.65	5.00e-32	131.00
IUUC-Sit-109813	Setaria italica	35.94	8.00e-47	181.00
IUUC-Sbi-114459	Sorghum bicolor	32.03	6.00e-45	174.00
IUUC-Ssc-115460	Sus scrofa	96.58	6.00e-166	576.00
IUUC-Tsy-119385	Tarsius syrichta	81.62	3.00e-72	264.00
IUUC-Tni-120493	Tetraodon nigroviridis	60.17	3.00e-94	338.00
IUUC-Tre-121911	Trichoderma reesei	33.58	8.00e-28	117.00
IUUC-Tur-126610	Triticum urartu	38.11	6.00e-33	135.00
IUUC-Tbe-127603	Tupaia belangeri	84.67	5.00e-55	207.00
IUUC-Ttr-129232	Tursiops truncatus	86.78	1.00e-144	505.00
IUUC-Vda-129946	Verticillium dahliae	33.33	7.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence