iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000014944.1	ENSSHAT00000017739.1	ENSSHAP00000017594.1
ENSSHAG00000014944.1	ENSSHAT00000017740.1	ENSSHAP00000017595.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.00e-20	73.3	204	243
ULD/UDP/UBQ/UBQ_PIM	2.30e-17	62.8	62	118

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e +l ++++MG++re+++ aLra++nn+ +AveyLl+g
   Q: 204  EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 243
           7899**********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 22   tveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
            v+ lKeki++e+g   +p++ qkLIyaGkiL+Dd ++++++i+++++v+++v+k+k
   Q: 62   QVKVLKEKIEAEKGrdaFPVSGQKLIYAGKILSDDVPIRDYKIDEKNFVVVMVTKAK 118
           6999**************************************************987 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MTTAVVHTWR AAAASPARTA PRLMGARASP QSGRSGRGKP APGSSAWPGH QLQLEGDFGL 60
RQVKVLKEKI EAEKGRDAFP VSGQKLIYAG KILSDDVPIR DYKIDEKNFV VVMVTKAKAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGACAG CAGTAGTTCA CACTTGGAGA GCAGCCGCGG CGTCCCCCGC TCGGACAGCA 60
CCCCGGCTAA TGGGGGCCCG AGCGTCCCCT CAGTCAGGGA GGTCCGGCCG GGGCAAGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0045070--P:positive regulation of viral genome replication
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process

KEGG

shr:100926807

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	38.52	1.00e-31	130.00
IUUC-Aml-001515	Ailuropoda melanoleuca	83.72	7.00e-127	446.00
IUUC-Atr-002756	Amborella trichopoda	36.39	3.00e-44	172.00
IUUC-Aca-004704	Anolis carolinensis	73.71	2.00e-104	372.00
IUUC-Aly-006159	Arabidopsis lyrata	36.00	1.00e-45	177.00
IUUC-Ath-006674	Arabidopsis thaliana	43.15	1.00e-37	150.00
IUUC-Ago-007830	Ashbya gossypii	29.76	8.00e-15	74.70
IUUC-Acl-008212	Aspergillus clavatus	35.41	2.00e-24	106.00
IUUC-Afl-008605	Aspergillus flavus	36.08	5.00e-26	112.00
IUUC-Ani-009460	Aspergillus nidulans	38.93	2.00e-28	119.00
IUUC-Aor-010032	Aspergillus oryzae	36.08	7.00e-26	111.00
IUUC-Ame-011107	Astyanax mexicanus	70.30	1.00e-33	137.00
IUUC-Bgr-012056	Blumeria graminis	33.82	2.00e-33	136.00
IUUC-Bta-012377	Bos taurus	83.04	2.00e-122	431.00
IUUC-Bdi-014253	Brachypodium distachyon	38.52	4.00e-32	132.00
IUUC-Bra-016970	Brassica rapa	34.78	2.00e-45	176.00
IUUC-Cel-018364	Caenorhabditis elegans	37.14	6.00e-20	91.30
IUUC-Cja-018946	Callithrix jacchus	83.99	6.00e-118	416.00
IUUC-Cfa-020577	Canis familiaris	84.21	1.00e-128	452.00
IUUC-Cpo-021850	Cavia porcellus	82.46	1.00e-134	472.00
IUUC-Csa-023183	Chlorocebus sabaeus	84.55	9.00e-125	439.00
IUUC-Cin-025741	Ciona intestinalis	45.27	2.00e-35	142.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	45.74	4.00e-14	72.00
IUUC-Cme-027260	Cyanidioschyzon merolae	26.54	6.00e-22	98.60
IUUC-Dre-028209	Danio rerio	59.15	3.00e-83	301.00
IUUC-Dno-030017	Dasypus novemcinctus	83.43	2.00e-120	425.00
IUUC-Dor-030358	Dipodomys ordii	75.51	1.00e-99	356.00
IUUC-Dme-032027	Drosophila melanogaster	36.88	3.00e-50	192.00
IUUC-Eca-033599	Equus caballus	80.17	7.00e-123	433.00
IUUC-Fca-036051	Felis catus	83.63	2.00e-127	448.00
IUUC-Fso-038107	Fusarium solani	49.50	2.00e-15	76.60
IUUC-Gmo-038528	Gadus morhua	70.64	2.00e-67	248.00
IUUC-Gga-040133	Gallus gallus	89.10	6.00e-77	280.00
IUUC-Gac-042298	Gasterosteus aculeatus	60.78	2.00e-85	308.00
IUUC-Ggo-045084	Gorilla gorilla	83.67	6.00e-125	440.00
IUUC-Hsa-046614	Homo sapiens	84.84	1.00e-125	442.00
IUUC-Hvu-047832	Hordeum vulgare	38.11	2.00e-31	129.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	84.26	4.00e-131	461.00
IUUC-Lch-050563	Latimeria chalumnae	60.99	2.00e-94	339.00
IUUC-Laf-054589	Loxodonta africana	83.67	1.00e-117	415.00
IUUC-Mcc-055860	Macaca mulatta	84.55	9.00e-125	439.00
IUUC-Meu-056459	Macropus eugenii	96.50	1.00e-140	492.00
IUUC-Mtr-058713	Medicago truncatula	41.15	3.00e-37	148.00
IUUC-Mmr-060819	Microcebus murinus	86.55	1.00e-129	456.00
IUUC-Mdo-062742	Monodelphis domestica	95.32	1.00e-152	532.00
IUUC-Mmu-063929	Mus musculus	83.09	1.00e-126	446.00
IUUC-Mpu-066684	Mustela putorius furo	83.67	6.00e-128	450.00
IUUC-Mlu-067787	Myotis lucifugus	78.93	1.00e-118	419.00
IUUC-Nle-069846	Nomascus leucogenys	71.97	8.00e-106	376.00
IUUC-Ont-072271	Oreochromis niloticus	58.21	1.00e-88	319.00
IUUC-Oan-073572	Ornithorhynchus anatinus	80.41	5.00e-126	443.00
IUUC-Oba-075392	Oryza barthii	37.10	5.00e-31	128.00
IUUC-Obr-076909	Oryza brachyantha	32.10	2.00e-37	149.00
IUUC-Ogu-078883	Oryza glumaepatula	37.10	4.00e-31	128.00
IUUC-Oin-079817	Oryza indica	37.10	4.00e-31	128.00
IUUC-Olo-080929	Oryza longistaminata	37.10	4.00e-31	128.00
IUUC-Ome-081866	Oryza meridionalis	37.10	4.00e-31	128.00
IUUC-Oni-083092	Oryza nivara	37.10	4.00e-31	128.00
IUUC-Opu-083756	Oryza punctata	38.71	2.00e-32	133.00
IUUC-Oru-084816	Oryza rufipogon	37.10	4.00e-31	128.00
IUUC-Osa-086112	Oryza sativa	37.10	4.00e-31	128.00
IUUC-Ola-086474	Oryzias latipes	60.56	1.00e-59	222.00
IUUC-Oga-089075	Otolemur garnettii	84.80	8.00e-120	423.00
IUUC-Oar-090387	Ovis aries	81.34	2.00e-117	415.00
IUUC-Ptr-090912	Pan troglodytes	84.88	4.00e-126	444.00
IUUC-Pan-092140	Papio anubis	84.55	2.00e-124	438.00
IUUC-Psi-093347	Pelodiscus sinensis	75.08	2.00e-76	278.00
IUUC-Ppa-095654	Physcomitrella patens	41.63	3.00e-35	142.00
IUUC-Pfo-096607	Poecilia formosa	64.84	2.00e-95	342.00
IUUC-Pab-097738	Pongo abelii	84.88	2.00e-125	442.00
IUUC-Pop-099642	Populus trichocarpa	35.92	1.00e-44	173.00
IUUC-Pca-100348	Procavia capensis	81.40	6.00e-121	426.00
IUUC-Ppe-101830	Prunus persica	34.14	4.00e-40	158.00
IUUC-Pva-102412	Pteropus vampyrus	83.38	2.00e-126	444.00
IUUC-Pgr-103618	Puccinia graminis	36.29	4.00e-25	108.00
IUUC-Rno-105569	Rattus norvegicus	84.21	2.00e-126	445.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	39.27	7.00e-33	134.00
IUUC-Smo-109518	Selaginella moellendorffii	38.40	2.00e-32	132.00
IUUC-Sit-109813	Setaria italica	40.77	1.00e-34	140.00
IUUC-Sly-111899	Solanum lycopersicum	36.32	2.00e-48	186.00
IUUC-Sbi-114459	Sorghum bicolor	34.24	7.00e-39	154.00
IUUC-Ssc-115460	Sus scrofa	81.63	2.00e-122	431.00
IUUC-Tni-120493	Tetraodon nigroviridis	72.09	4.00e-74	271.00
IUUC-Tca-121594	Theobroma cacao	34.75	4.00e-40	158.00
IUUC-Tur-126610	Triticum urartu	38.52	4.00e-32	132.00
IUUC-Tbe-127603	Tupaia belangeri	83.21	1.00e-53	203.00
IUUC-Ttr-129232	Tursiops truncatus	94.88	6.00e-98	350.00
IUUC-Vvi-131039	Vitis vinifera	40.25	2.00e-39	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence