iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107598

Ensembl Protein ID

ENSSHAP00000014026.1

UniProt Accession

G3WF21; G3WF21_SARHA

Genbank Protein ID

ENSSHAP00000014026

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01131674

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000011994.1	ENSSHAT00000014143.1	ENSSHAP00000014026.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.40e-08	34.0	276	313

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 276  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLN 313
           78999*******************************97 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

YLSDEGIEAC KSSPDKVNIN DIILIALNTD LRTIGKKFLP SDINGGKVEK LEGPCVLQIQ 60
KIRNVAAPKD NEESQVAPRM LRLQMTDGHI SCTAVEFNYM SKISLCTHKG NTVRRLNGWI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCTTTCAG ATGAAGGAAT TGAAGCCTGC AAAAGTTCTC CTGATAAAGT CAATATAAAT 60
GACATCATCC TGATTGCCCT CAATGTAGGT GATATTTATA CATTTTTCTA AAAGAATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	28.91	3.00e-06	45.80
IUUC-Aml-001751	Ailuropoda melanoleuca	80.30	0.00e+00	1111.00
IUUC-Atr-002788	Amborella trichopoda	30.30	5.00e-11	62.00
IUUC-Apl-004055	Anas platyrhynchos	72.95	0.00e+00	908.00
IUUC-Aca-004367	Anolis carolinensis	70.71	0.00e+00	993.00
IUUC-Aly-006072	Arabidopsis lyrata	30.19	8.00e-13	68.20
IUUC-Ath-007491	Arabidopsis thaliana	29.56	2.00e-12	66.60
IUUC-Ame-011439	Astyanax mexicanus	55.63	1.00e-97	350.00
IUUC-Bta-012894	Bos taurus	75.61	0.00e+00	1053.00
IUUC-Bdi-014462	Brachypodium distachyon	28.80	3.00e-10	59.70
IUUC-Bol-015343	Brassica oleracea	31.94	3.00e-14	72.80
IUUC-Bra-016787	Brassica rapa	31.38	4.00e-14	72.00
IUUC-Cel-018154	Caenorhabditis elegans	32.74	7.00e-14	72.40
IUUC-Cja-019364	Callithrix jacchus	77.86	0.00e+00	965.00
IUUC-Cfa-021166	Canis familiaris	79.51	0.00e+00	1080.00
IUUC-Cpo-021678	Cavia porcellus	68.99	0.00e+00	787.00
IUUC-Csa-023299	Chlorocebus sabaeus	78.61	0.00e+00	1142.00
IUUC-Cho-024694	Choloepus hoffmanni	79.93	9.00e-110	390.00
IUUC-Cin-025191	Ciona intestinalis	35.78	2.00e-28	118.00
IUUC-Csv-026348	Ciona savignyi	52.94	7.00e-12	61.60
IUUC-Dre-028715	Danio rerio	46.83	6.00e-144	504.00
IUUC-Dno-030091	Dasypus novemcinctus	79.16	0.00e+00	1138.00
IUUC-Dor-030807	Dipodomys ordii	72.06	0.00e+00	868.00
IUUC-Dme-031770	Drosophila melanogaster	29.33	9.00e-29	122.00
IUUC-Ete-032507	Echinops telfairi	64.63	0.00e+00	639.00
IUUC-Eca-033406	Equus caballus	76.66	0.00e+00	848.00
IUUC-Eeu-034600	Erinaceus europaeus	70.69	0.00e+00	811.00
IUUC-Fca-035916	Felis catus	80.38	0.00e+00	1112.00
IUUC-Fal-036658	Ficedula albicollis	73.16	0.00e+00	962.00
IUUC-Gmo-038974	Gadus morhua	50.79	1.00e-81	297.00
IUUC-Gga-040195	Gallus gallus	73.43	0.00e+00	1032.00
IUUC-Gac-042537	Gasterosteus aculeatus	43.80	1.00e-142	500.00
IUUC-Gma-044234	Glycine max	30.57	8.00e-12	64.70
IUUC-Ggo-044715	Gorilla gorilla	77.17	0.00e+00	992.00
IUUC-Hsa-045814	Homo sapiens	79.43	0.00e+00	1152.00
IUUC-Hvu-047365	Hordeum vulgare	26.80	3.00e-06	46.20
IUUC-Itr-047866	Ictidomys tridecemlineatus	79.16	0.00e+00	1125.00
IUUC-Lch-050393	Latimeria chalumnae	60.41	0.00e+00	773.00
IUUC-Lpe-050691	Leersia perrieri	30.62	9.00e-12	64.70
IUUC-Loc-052859	Lepisosteus oculatus	54.64	0.00e+00	639.00
IUUC-Laf-053953	Loxodonta africana	80.51	0.00e+00	766.00
IUUC-Mcc-055846	Macaca mulatta	78.20	0.00e+00	1137.00
IUUC-Meu-056790	Macropus eugenii	77.86	0.00e+00	949.00
IUUC-Mtr-058749	Medicago truncatula	32.47	9.00e-10	58.20
IUUC-Mla-058959	Melampsora laricipopulina	37.93	1.40e+00	26.90
IUUC-Mga-059656	Meleagris gallopavo	73.43	0.00e+00	961.00
IUUC-Mmr-061089	Microcebus murinus	77.67	0.00e+00	1045.00
IUUC-Mdo-063043	Monodelphis domestica	73.79	0.00e+00	798.00
IUUC-Mmu-063654	Mus musculus	75.34	0.00e+00	1024.00
IUUC-Mac-064947	Musa acuminata	30.77	1.00e-08	53.90
IUUC-Mpu-066115	Mustela putorius furo	76.79	0.00e+00	856.00
IUUC-Mlu-066974	Myotis lucifugus	75.11	0.00e+00	990.00
IUUC-Nle-069184	Nomascus leucogenys	79.02	0.00e+00	1147.00
IUUC-Opr-070770	Ochotona princeps	72.06	0.00e+00	914.00
IUUC-Ont-072040	Oreochromis niloticus	44.88	6.00e-158	551.00
IUUC-Oan-073448	Ornithorhynchus anatinus	84.92	7.00e-76	276.00
IUUC-Ocu-074405	Oryctolagus cuniculus	79.16	0.00e+00	1100.00
IUUC-Oba-075977	Oryza barthii	26.71	9.00e-06	44.30
IUUC-Obr-076298	Oryza brachyantha	28.48	4.00e-09	55.80
IUUC-Ogl-077706	Oryza glaberrima	27.33	5.00e-06	45.40
IUUC-Ogu-078381	Oryza glumaepatula	27.95	2.00e-07	49.70
IUUC-Oin-080150	Oryza indica	27.95	2.00e-06	47.00
IUUC-Ome-081153	Oryza meridionalis	27.16	4.00e-06	45.80
IUUC-Oni-083115	Oryza nivara	27.33	5.00e-06	45.10
IUUC-Opu-083860	Oryza punctata	30.00	2.00e-10	60.10
IUUC-Oru-084859	Oryza rufipogon	27.95	2.00e-06	47.00
IUUC-Osa-085567	Oryza sativa	27.95	3.00e-05	42.70
IUUC-Ola-087049	Oryzias latipes	44.70	1.00e-146	513.00
IUUC-Oga-088455	Otolemur garnettii	78.88	0.00e+00	1121.00
IUUC-Oar-090096	Ovis aries	78.75	0.00e+00	1115.00
IUUC-Ptr-090974	Pan troglodytes	77.10	0.00e+00	1005.00
IUUC-Pan-092657	Papio anubis	78.47	0.00e+00	1142.00
IUUC-Psi-093113	Pelodiscus sinensis	74.66	0.00e+00	935.00
IUUC-Ppa-095466	Physcomitrella patens	30.20	2.00e-11	63.50
IUUC-Pfo-096631	Poecilia formosa	44.91	4.00e-145	508.00
IUUC-Pab-098070	Pongo abelii	79.16	0.00e+00	1149.00
IUUC-Pop-099235	Populus trichocarpa	30.26	3.00e-11	63.20
IUUC-Pca-101032	Procavia capensis	72.06	0.00e+00	914.00
IUUC-Ppe-101793	Prunus persica	27.75	7.00e-11	61.60
IUUC-Pva-102290	Pteropus vampyrus	76.64	0.00e+00	962.00
IUUC-Rno-105080	Rattus norvegicus	72.21	0.00e+00	828.00
IUUC-Sit-110735	Setaria italica	28.75	1.00e-08	54.30
IUUC-Sly-111126	Solanum lycopersicum	34.18	5.00e-10	58.90
IUUC-Stu-112780	Solanum tuberosum	30.77	3.00e-13	69.30
IUUC-Sar-113418	Sorex araneus	75.91	0.00e+00	917.00
IUUC-Sbi-113925	Sorghum bicolor	29.19	7.00e-10	58.20
IUUC-Ssc-115712	Sus scrofa	79.32	0.00e+00	1117.00
IUUC-Tgu-117148	Taeniopygia guttata	73.81	0.00e+00	1002.00
IUUC-Tru-117831	Takifugu rubripes	52.76	1.00e-102	367.00
IUUC-Tsy-118917	Tarsius syrichta	76.18	0.00e+00	912.00
IUUC-Tni-120783	Tetraodon nigroviridis	51.72	2.00e-102	366.00
IUUC-Tca-121430	Theobroma cacao	34.62	3.30e-02	32.70
IUUC-Tae-123752	Triticum aestivum	27.70	2.00e-06	46.60
IUUC-Tur-126238	Triticum urartu	26.12	8.00e-05	41.20
IUUC-Ttr-128615	Tursiops truncatus	75.84	0.00e+00	936.00
IUUC-Vpa-130531	Vicugna pacos	78.47	0.00e+00	982.00
IUUC-Vvi-131607	Vitis vinifera	32.68	2.00e-05	43.50
IUUC-Xtr-132787	Xenopus tropicalis	58.79	0.00e+00	737.00
IUUC-Xma-133815	Xiphophorus maculatus	45.48	9.00e-143	500.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence