iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-089109

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03131653

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000011551.2	ENSOGAT00000011555.2	ENSOGAP00000010339.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-09	37.3	479	517
E3 activity/RING/U-box	2.40e-11	43.6	476	543

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  f++ p+++pCgH+f+++Cl++          +++CPlC+
   Q: 479  CALCMRLFFE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 517
           **********.9**************999......9*********7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 476  DLECALCMRLFFEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLsqclASRKYSKNVIMEELIAKFL 543
           678*********************************9.****876633336777788888888887776 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MDSLQTEQML SLPAAELSSN NLELAEPAEP AEPVASAAGA DTGPHPETPT EGPAPLSTRE 60
PEEDQPPRTS SPECKVLLTQ ADALASGGRL QEALEVYRQL SERQQLVAEQ LEQLVRCLAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAC TTCAGACCGA ACAGATGCTG AGCTTGCCCG CCGCCGAGCT CAGCAGCAAC 60
AACTTAGAGC TGGCGGAGCC GGCGGAGCCG GCGGAGCCGG TGGCATCGGC GGCCGGCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000755	Aegilops tauschii	29.47	8.00e-11	61.60
IUUC-Aml-001774	Ailuropoda melanoleuca	76.41	0.00e+00	1001.00
IUUC-Apl-003916	Anas platyrhynchos	59.34	4.00e-177	613.00
IUUC-Ani-009473	Aspergillus nidulans	30.54	4.00e-42	166.00
IUUC-Bta-012872	Bos taurus	84.97	0.00e+00	1118.00
IUUC-Cel-018356	Caenorhabditis elegans	31.33	1.00e-09	55.50
IUUC-Cja-018747	Callithrix jacchus	78.34	0.00e+00	1025.00
IUUC-Cfa-020101	Canis familiaris	84.48	0.00e+00	1109.00
IUUC-Cpo-022041	Cavia porcellus	75.19	0.00e+00	1001.00
IUUC-Csa-024034	Chlorocebus sabaeus	85.34	0.00e+00	1169.00
IUUC-Csv-026364	Ciona savignyi	45.21	7.00e-79	287.00
IUUC-Dno-029518	Dasypus novemcinctus	76.40	0.00e+00	1014.00
IUUC-Dor-031132	Dipodomys ordii	69.10	0.00e+00	988.00
IUUC-Dse-031331	Dothistroma septosporum	31.61	7.00e-39	155.00
IUUC-Eca-033382	Equus caballus	86.77	0.00e+00	1206.00
IUUC-Fca-035777	Felis catus	77.69	0.00e+00	712.00
IUUC-Fal-036730	Ficedula albicollis	73.16	2.00e-160	559.00
IUUC-Gmo-039110	Gadus morhua	48.57	4.00e-175	607.00
IUUC-Gac-042201	Gasterosteus aculeatus	48.67	0.00e+00	649.00
IUUC-Ggo-045111	Gorilla gorilla	84.82	0.00e+00	1163.00
IUUC-Hsa-045695	Homo sapiens	84.82	0.00e+00	1161.00
IUUC-Lch-050429	Latimeria chalumnae	51.99	0.00e+00	738.00
IUUC-Loc-051823	Lepisosteus oculatus	52.38	0.00e+00	656.00
IUUC-Lma-053145	Leptosphaeria maculans	31.04	5.00e-42	165.00
IUUC-Laf-053434	Loxodonta africana	86.11	0.00e+00	878.00
IUUC-Mcc-055249	Macaca mulatta	79.68	0.00e+00	748.00
IUUC-Mga-060131	Meleagris gallopavo	61.52	1.00e-177	616.00
IUUC-Mmr-060749	Microcebus murinus	88.85	0.00e+00	1238.00
IUUC-Mdo-062261	Monodelphis domestica	56.45	0.00e+00	750.00
IUUC-Mmu-063219	Mus musculus	79.30	0.00e+00	1073.00
IUUC-Mpu-066222	Mustela putorius furo	75.35	0.00e+00	975.00
IUUC-Mlu-067769	Myotis lucifugus	81.06	0.00e+00	1082.00
IUUC-Nle-069738	Nomascus leucogenys	87.85	0.00e+00	948.00
IUUC-Ont-072029	Oreochromis niloticus	55.64	3.00e-172	598.00
IUUC-Oan-073179	Ornithorhynchus anatinus	77.68	2.00e-164	572.00
IUUC-Ocu-074884	Oryctolagus cuniculus	80.83	0.00e+00	1071.00
IUUC-Ogl-077658	Oryza glaberrima	35.11	3.00e-12	66.20
IUUC-Ome-081482	Oryza meridionalis	35.11	5.00e-12	65.50
IUUC-Osa-085978	Oryza sativa	35.11	3.00e-12	66.20
IUUC-Ola-086698	Oryzias latipes	47.57	2.00e-180	625.00
IUUC-Oar-089903	Ovis aries	85.10	0.00e+00	1122.00
IUUC-Ptr-091238	Pan troglodytes	84.53	0.00e+00	1153.00
IUUC-Pan-092379	Papio anubis	80.19	0.00e+00	1154.00
IUUC-Psi-093418	Pelodiscus sinensis	56.44	0.00e+00	642.00
IUUC-Pma-094231	Petromyzon marinus	62.50	2.00e-108	385.00
IUUC-Pno-094889	Phaeosphaeria nodorum	39.62	8.00e-43	167.00
IUUC-Pfo-097284	Poecilia formosa	44.97	4.00e-177	614.00
IUUC-Pab-098343	Pongo abelii	79.22	0.00e+00	1137.00
IUUC-Pca-100905	Procavia capensis	79.55	0.00e+00	991.00
IUUC-Pva-102242	Pteropus vampyrus	79.95	0.00e+00	1097.00
IUUC-Ptt-103898	Puccinia triticina	26.72	3.00e-29	123.00
IUUC-Pte-104214	Pyrenophora teres	31.04	3.00e-40	159.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	31.34	4.00e-40	159.00
IUUC-Rno-105899	Rattus norvegicus	75.27	0.00e+00	1069.00
IUUC-Sha-107565	Sarcophilus harrisii	50.85	0.00e+00	682.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	35.92	5.00e-30	125.00
IUUC-Spo-108344	Schizosaccharomyces pombe	33.50	2.00e-23	103.00
IUUC-Sar-112999	Sorex araneus	61.87	0.00e+00	650.00
IUUC-Sre-114977	Sporisorium reilianum	32.94	2.00e-36	147.00
IUUC-Ssc-115705	Sus scrofa	85.38	0.00e+00	1162.00
IUUC-Tgu-116978	Taeniopygia guttata	64.64	0.00e+00	783.00
IUUC-Tsy-118988	Tarsius syrichta	90.40	0.00e+00	911.00
IUUC-Tbe-127563	Tupaia belangeri	70.94	3.00e-144	504.00
IUUC-Ttr-128875	Tursiops truncatus	84.70	0.00e+00	1085.00
IUUC-Vpa-130779	Vicugna pacos	96.52	9.00e-162	563.00
IUUC-Xtr-132508	Xenopus tropicalis	52.06	0.00e+00	715.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence